Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 2.1e-97 359.0 181 100.0
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 2.2e-73 279.3 176 84.1
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 4.8e-73 278.1 171 85.4
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 3.2e-61 238.8 158 79.7
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 3.6e-60 235.3 174 72.4
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 1.7e-54 216.5 139 84.9
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 2.5e-45 186.0 182 61.5
C03p56750 Brassica napus HOM05D005703 ORTHO05D006643 4.9e-33 145.2 102 72.5
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 1.0e-30 137.5 120 67.5
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 1.5e-29 133.7 86 83.7
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 5.2e-27 125.2 140 56.4
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 4.4e-26 122.1 140 55.0
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 4.4e-26 122.1 149 55.0
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 1.3e-25 120.6 140 52.9
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 2.2e-25 119.8 140 53.6
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 2.2e-25 119.8 140 54.3
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 1.4e-24 117.1 140 52.9
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 1.4e-24 117.1 140 52.9
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 1.9e-24 116.7 140 52.9
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 5.4e-24 115.2 140 50.7
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 5.4e-24 115.2 140 50.7
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 5.4e-24 115.2 140 52.1
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 1.2e-23 114.0 140 50.0
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 1.1e-21 107.5 151 45.0
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 6.2e-20 101.7 151 42.4
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 8.1e-20 101.3 151 43.0
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 1.4e-19 100.5 151 41.7
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 2.3e-19 99.8 151 43.0
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 3.1e-19 99.4 197 36.5
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 4.0e-19 99.0 151 44.4
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 4.0e-19 99.0 140 45.0
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 6.8e-19 98.2 151 41.7
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 8.9e-19 97.8 151 41.1
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 8.9e-19 97.8 151 41.1
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 1.2e-18 97.4 151 43.0
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 1.2e-18 97.4 151 41.1
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 2.6e-18 96.3 151 41.7
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 5.8e-18 95.1 151 41.1
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 5.8e-18 95.1 151 41.7
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 7.5e-18 94.7 151 41.7
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 9.9e-18 94.4 151 40.4
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 9.9e-18 94.4 140 43.6
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 9.9e-18 94.4 151 40.4
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 9.9e-18 94.4 151 40.4
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 1.3e-17 94.0 151 40.4
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 1.3e-17 94.0 151 40.4
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 1.7e-17 93.6 146 41.1
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 2.2e-17 93.2 151 40.4
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 2.2e-17 93.2 151 41.1
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 3.7e-17 92.4 141 41.8
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 3.7e-17 92.4 151 41.1
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 3.7e-17 92.4 151 39.7
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 3.7e-17 92.4 158 38.0
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 4.9e-17 92.0 140 43.6
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 4.9e-17 92.0 193 36.3
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 6.4e-17 91.7 151 38.4
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 8.3e-17 91.3 147 40.1
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.4e-16 90.5 151 39.1
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 1.4e-16 90.5 143 40.6
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 1.4e-16 90.5 151 40.4
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 1.4e-16 90.5 151 39.1
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 1.4e-16 90.5 151 39.7
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 1.4e-16 90.5 150 38.7
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 1.4e-16 90.5 140 41.4
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 1.9e-16 90.1 147 39.5
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.9e-16 90.1 142 40.8
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 2.4e-16 89.7 151 39.1
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.4e-16 89.7 142 40.1
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.4e-16 89.7 142 40.1
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 3.2e-16 89.4 147 40.1
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 3.2e-16 89.4 151 37.7
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 3.2e-16 89.4 151 37.7
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 4.1e-16 89.0 151 38.4
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 4.1e-16 89.0 151 39.7
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 5.4e-16 88.6 151 37.7
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 1.2e-15 87.4 112 45.5
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 1.2e-15 87.4 151 37.1
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 1.6e-15 87.0 151 37.7
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 1.6e-15 87.0 115 46.1
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 1.6e-15 87.0 158 36.7
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 2.1e-15 86.7 151 39.1
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 2.1e-15 86.7 146 39.0
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 2.7e-15 86.3 151 37.7
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 2.7e-15 86.3 144 38.9
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 3.5e-15 85.9 151 39.1
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 3.5e-15 85.9 151 39.1
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 3.5e-15 85.9 108 45.4
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 4.6e-15 85.5 110 47.3
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 4.6e-15 85.5 151 37.1
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 6.0e-15 85.1 151 39.1
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 6.0e-15 85.1 151 37.1
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 1.0e-14 84.3 151 35.1
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 1.7e-14 83.6 150 38.0
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 1.7e-14 83.6 151 35.1
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 3.9e-14 82.4 158 35.4
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 3.9e-14 82.4 151 37.1
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 8.6e-14 81.3 151 36.4
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.1e-13 80.9 112 42.0
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.1e-13 80.9 108 44.4
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.5e-13 80.5 169 34.3
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 1.5e-13 80.5 151 36.4
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 2.5e-13 79.7 173 33.5
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 5.6e-13 78.6 108 43.5
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 7.3e-13 78.2 151 35.1
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 1.6e-12 77.0 151 35.1
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.1e-12 76.6 232 28.9
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 2.8e-12 76.3 106 42.5
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 8.1e-12 74.7 108 41.7
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 1.1e-11 74.3 114 38.6
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 1.4e-11 73.9 103 44.7
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 6.8e-11 71.6 105 42.9
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 6.8e-11 71.6 105 42.9
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 6.8e-11 71.6 105 42.9
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 2.0e-10 70.1 77 54.5
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 2.6e-10 69.7 47 74.5
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 3.4e-10 69.3 39 87.2
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 4.9e-09 65.5 39 82.1
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 6.4e-09 65.1 109 37.6
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 9.3e-08 61.2 39 79.5
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 4.6e-07 58.9 81 44.4
HanXRQChr14g0433731 Helianthus annuus HOM05D005703 ORTHO05D006643 6.6e-06 55.1 81 43.2


User provided reference genes

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