Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.5e-248 861.3 470 100.0
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 9.7e-243 843.2 470 97.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.2e-226 788.9 480 91.0
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 5.2e-212 741.1 480 87.3
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 5.4e-209 731.1 501 83.0
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.1e-176 622.9 507 73.2
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.1e-156 557.4 490 69.0
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 3.6e-152 542.3 553 61.5
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.7e-149 533.5 536 62.3
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 5.5e-137 491.9 457 65.4
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 2.0e-86 323.9 386 56.7
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 6.9e-31 139.4 498 28.5
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.3e-29 135.2 131 51.9
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 2.9e-29 134.0 126 54.8
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 3.8e-29 133.7 536 28.9
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 1.4e-28 131.7 577 28.4
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.5e-28 129.8 148 44.6
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.7e-27 127.5 606 26.7
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 4.7e-27 126.7 359 31.8
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 7.9e-27 125.9 583 28.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.9e-27 125.9 593 28.2
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.0e-26 125.6 493 29.6
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.8e-26 124.8 559 27.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.3e-26 124.4 596 27.7
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 3.0e-26 124.0 541 27.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.1e-25 122.1 582 27.7
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.1e-25 122.1 129 49.6
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 5.7e-25 119.8 385 32.7
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 7.4e-25 119.4 121 48.8
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 2.2e-24 117.9 318 32.1
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 2.8e-24 117.5 495 28.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.7e-24 117.1 594 26.8
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 4.8e-24 116.7 502 28.7
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 4.8e-24 116.7 543 27.8
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 8.2e-24 115.9 610 27.2
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 8.2e-24 115.9 481 28.9
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.1e-23 115.5 161 45.3
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 2.4e-23 114.4 124 50.0
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 4.1e-23 113.6 453 29.4
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 4.1e-23 113.6 556 27.0
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 9.1e-23 112.5 125 46.4
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.2e-22 112.1 477 26.0
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.5e-22 111.7 278 36.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.0e-22 111.3 485 27.2
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.0e-22 111.3 297 28.3
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.0e-22 111.3 589 25.8
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.6e-22 110.9 497 28.2
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 2.6e-22 110.9 540 25.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 3.5e-22 110.5 297 28.3
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 3.5e-22 110.5 350 30.3
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.5e-22 110.2 164 40.2
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 7.7e-22 109.4 552 27.2
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.3e-21 108.6 321 29.0
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 6.5e-21 106.3 130 44.6
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 8.5e-21 105.9 384 30.2
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.5e-20 105.1 155 38.1
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.5e-20 105.1 221 32.6
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.9e-20 104.8 230 33.9
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.9e-20 104.8 286 31.8
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.9e-20 104.8 611 26.0
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.2e-20 104.0 209 34.0
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 3.2e-20 104.0 609 24.6
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 7.2e-20 102.8 139 39.6
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 9.4e-20 102.4 562 27.4
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.6e-19 101.7 328 30.5
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.6e-19 101.7 147 39.5
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 2.1e-19 101.3 312 31.4
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 2.7e-19 100.9 127 43.3
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.7e-19 100.1 235 33.2
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 8.0e-19 99.4 556 27.2
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.0e-18 99.0 127 42.5
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.0e-18 99.0 367 27.2
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.0e-18 99.0 402 28.6
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.4e-18 98.6 437 29.1
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.8e-18 98.2 560 25.7
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 5.2e-18 96.7 506 25.3
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.1e-17 95.5 119 48.7
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.5e-17 95.1 561 25.5
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 9.7e-17 92.4 495 25.9
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-16 92.0 558 26.7
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.7e-16 91.7 235 33.6
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 6.3e-16 89.7 203 32.5
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.4e-15 87.8 216 29.6
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 5.3e-15 86.7 639 24.6
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.0e-14 84.7 302 27.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.5e-14 84.0 570 26.0
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 3.5e-14 84.0 76 48.7
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.9e-14 83.2 538 27.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 8.5e-13 79.3 485 25.8
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.1e-12 79.0 125 35.2
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.1e-12 79.0 440 26.4
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 4.2e-12 77.0 417 25.9
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 5.5e-12 76.6 132 30.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 9.4e-12 75.9 297 27.3
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.0e-10 70.9 140 33.6
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.2e-09 68.9 139 30.9
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 3.4e-09 67.4 369 29.0
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 4.4e-09 67.0 307 27.7
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.1e-07 60.8 430 25.6
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 9.1e-07 59.3 52 50.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.6e-06 58.5 207 28.0
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.6e-06 58.5 207 28.0
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 3.5e-06 57.4 126 28.6


User provided reference genes

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