Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 6.1e-103 377.5 190 100.0
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 4.3e-80 301.6 217 74.2
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 3.6e-79 298.5 217 72.8
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-78 295.4 216 73.6
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-78 295.4 216 73.6
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 8.9e-78 293.9 209 74.2
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 8.9e-78 293.9 209 74.2
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-77 292.7 217 72.8
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-76 290.0 216 72.2
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 2.9e-76 288.9 209 73.7
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 3.9e-73 278.5 209 70.8
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 7.3e-72 274.2 197 73.1
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 3.6e-71 271.9 216 70.4
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 5.4e-67 258.1 183 74.3
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 6.6e-65 251.1 175 76.0
BcaC01g06451 Brassica carinata HOM05D007210 ORTHO05D006152 3.5e-58 228.8 154 77.9
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.9e-56 223.0 150 80.0
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-42 176.4 213 51.2
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.9e-40 169.9 207 49.3
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 4.3e-40 168.7 188 52.7
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-39 166.0 207 47.3
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 2.8e-39 166.0 207 47.3
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 4.8e-39 165.2 195 50.3
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 9.0e-38 161.0 210 47.6
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.6e-37 159.5 168 53.6
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 2.7e-34 149.4 145 55.9
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 6.7e-33 144.8 209 44.5
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 4.3e-32 142.1 169 52.1
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.0e-30 134.4 181 49.7
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 4.5e-29 132.1 149 49.7
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-27 127.1 181 45.9
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 2.7e-26 122.9 120 55.0
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 3.8e-20 102.4 119 48.7
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.2e-19 99.4 192 35.4
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.9e-17 92.4 186 32.8
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.3e-15 87.4 193 32.6
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.4e-14 84.0 153 35.3
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 9.1e-14 81.3 153 36.6
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.8e-12 75.9 143 33.6
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 5.0e-12 75.5 154 33.8
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.5e-12 75.1 149 32.2
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 6.5e-12 75.1 159 31.4
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-11 74.3 149 36.9
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-11 74.3 153 33.3
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-11 73.9 138 34.8
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 1.4e-11 73.9 138 34.8
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.4e-11 73.9 137 36.5
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.5e-11 73.2 143 32.9
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 2.5e-11 73.2 154 32.5
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 3.2e-11 72.8 153 34.0
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 4.2e-11 72.4 154 32.5
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 4.2e-11 72.4 154 32.5
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 9.4e-11 71.2 128 35.9
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 9.4e-11 71.2 153 30.7
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 9.4e-11 71.2 157 30.6
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 1.2e-10 70.9 137 35.0
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.2e-10 70.9 83 44.6
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-10 70.1 153 34.0
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 2.1e-10 70.1 153 34.0
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.7e-10 69.7 117 35.9
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.6e-10 69.3 169 30.2
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 3.6e-10 69.3 141 31.2
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.7e-10 68.9 152 31.6
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 4.7e-10 68.9 159 31.4
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 4.7e-10 68.9 157 33.1
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 4.7e-10 68.9 117 36.8
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 6.1e-10 68.6 137 32.1
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.3e-09 66.6 168 29.8
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 6.7e-09 65.1 175 28.6
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 8.8e-09 64.7 160 31.2
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-08 64.3 153 29.4
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-08 64.3 144 31.9
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-08 63.5 141 31.2
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.0e-08 63.5 90 40.0
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 2.0e-08 63.5 119 33.6
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 5.7e-08 62.0 140 32.9
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.7e-08 62.0 141 30.5
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 9.7e-08 61.2 136 32.4
C09p48560 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-07 60.8 78 50.0
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 1.3e-07 60.8 155 29.7
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.2e-07 60.1 113 34.5
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.2e-07 60.1 143 32.2
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.2e-07 60.1 143 30.8
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.7e-07 59.3 72 40.3
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 4.8e-07 58.9 154 29.9
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 8.2e-07 58.2 148 29.7
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 8.2e-07 58.2 161 32.3
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.1e-06 57.8 123 34.1
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-06 57.4 155 31.0
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-06 57.4 153 32.0
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.8e-06 57.0 88 39.8
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.1e-06 56.2 142 32.4
AL7G39710 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 4.1e-06 55.8 144 30.6
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 5.3e-06 55.5 112 35.7
AL52U10010 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.0e-06 55.1 116 36.2
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 9.1e-06 54.7 112 34.8


User provided reference genes

Program Settings