Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 2.7e-120 435.3 209 100.0
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 3.9e-119 431.4 209 98.6
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 3.9e-119 431.4 209 98.6
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 3.9e-119 431.4 209 98.6
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 1.7e-117 426.0 209 97.1
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 1.7e-117 426.0 209 97.1
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 7.9e-112 407.1 211 93.8
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 3.0e-111 405.2 209 90.9
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 1.8e-103 379.4 210 85.2
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.5e-102 376.3 210 84.3
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 5.7e-102 374.4 210 83.3
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 3.1e-100 368.6 207 84.5
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 2.3e-87 325.9 210 74.3
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 2.8e-80 302.4 158 86.7
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 4.7e-80 301.6 172 81.4
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 4.7e-80 301.6 208 70.7
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 4.7e-80 301.6 187 77.0
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 1.0e-79 300.4 175 80.6
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.0e-79 300.4 170 79.4
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 1.4e-79 300.1 173 79.8
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.8e-79 299.7 176 79.5
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 2.3e-79 299.3 181 76.2
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 2.3e-79 299.3 207 69.6
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 3.0e-79 298.9 179 79.3
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 3.0e-79 298.9 173 78.0
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 4.0e-79 298.5 175 78.3
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 5.2e-79 298.1 183 76.0
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 8.9e-79 297.4 187 76.5
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.2e-78 297.0 180 76.7
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 1.5e-78 296.6 206 70.9
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 2.0e-78 296.2 171 80.1
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 2.0e-78 296.2 170 78.2
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 2.6e-78 295.8 177 77.4
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 2.6e-78 295.8 177 76.8
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 2.6e-78 295.8 184 72.3
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 3.4e-78 295.4 175 78.9
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 3.4e-78 295.4 176 76.1
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 3.4e-78 295.4 176 80.1
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 4.4e-78 295.0 185 75.1
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 5.7e-78 294.7 172 79.7
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 5.7e-78 294.7 200 69.5
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 5.7e-78 294.7 202 71.3
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 5.7e-78 294.7 187 74.9
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 7.5e-78 294.3 177 76.8
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 7.5e-78 294.3 170 78.2
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 9.8e-78 293.9 174 78.2
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 9.8e-78 293.9 168 77.4
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 9.8e-78 293.9 182 75.3
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.3e-77 293.5 202 70.8
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.3e-77 293.5 166 79.5
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 1.7e-77 293.1 193 70.5
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.7e-77 293.1 171 79.5
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 1.7e-77 293.1 175 75.4
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 2.2e-77 292.7 175 75.4
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 2.2e-77 292.7 194 72.2
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 2.8e-77 292.4 179 74.9
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 2.8e-77 292.4 177 76.8
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 3.7e-77 292.0 165 79.4
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 4.9e-77 291.6 170 77.6
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 4.9e-77 291.6 187 72.2
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 4.9e-77 291.6 176 79.0
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 6.3e-77 291.2 187 71.7
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 6.3e-77 291.2 171 77.8
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 6.3e-77 291.2 170 78.8
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 6.3e-77 291.2 176 74.4
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 8.3e-77 290.8 168 76.8
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 8.3e-77 290.8 181 76.2
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 1.1e-76 290.4 177 73.4
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 4.1e-76 288.5 177 75.1
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 5.4e-76 288.1 172 76.7
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.4e-76 288.1 172 75.6
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.4e-76 288.1 172 75.6
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 7.0e-76 287.7 159 81.8
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 7.0e-76 287.7 172 75.6
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 9.2e-76 287.3 155 82.6
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 1.6e-75 286.6 186 73.1
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 2.0e-75 286.2 176 75.6
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 2.7e-75 285.8 173 75.7
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 4.5e-75 285.0 171 77.8
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 5.9e-75 284.6 170 74.7
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 1.3e-74 283.5 173 76.3
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 3.9e-74 282.0 167 76.0
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 5.0e-74 281.6 168 73.8
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 6.6e-74 281.2 167 75.4
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 2.8e-72 275.8 196 67.9
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 2.3e-71 272.7 150 83.3
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 3.4e-70 268.9 159 75.5
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 4.4e-70 268.5 156 79.5
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 1.3e-69 266.9 154 78.6
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.7e-69 266.5 155 78.1
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 2.9e-69 265.8 201 63.7
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 9.2e-68 260.8 163 75.5
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 2.0e-67 259.6 164 77.4
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 1.1e-63 247.3 174 69.0
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.2e-61 239.6 172 64.5
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 2.3e-58 229.6 135 75.6
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 4.3e-57 225.3 186 59.1
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 3.7e-53 212.2 125 76.8
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 1.1e-52 210.7 153 61.4
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 2.4e-52 209.5 123 84.6
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 9.5e-49 197.6 110 81.8
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 1.6e-48 196.8 135 68.9
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.9e-47 191.0 172 54.7
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 9.2e-44 181.0 119 66.4
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 8.7e-42 174.5 130 63.1
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 2.8e-40 169.5 173 52.6
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 1.2e-30 137.5 161 43.5
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 1.8e-26 123.6 79 77.2
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 6.9e-23 111.7 178 40.4
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 3.1e-15 86.3 42 92.9
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.9e-12 77.0 47 70.2


User provided reference genes

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