Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p13750 Brassica napus HOM05D005444 ORTHO05D042479 1.2e-61 239.6 117 100.0
BolC3t13825H Brassica oleracea HOM05D005444 ORTHO05D042479 1.2e-61 239.6 117 100.0
BolC3t13820H Brassica oleracea HOM05D000021 ORTHO05D000010 1.7e-15 86.3 49 81.6
AT5G59400 Arabidopsis thaliana HOM05D005444 ORTHO05D006773 3.9e-15 85.1 44 90.9
AL8G35870 Arabidopsis lyrata HOM05D005444 ORTHO05D006773 1.1e-14 83.6 44 88.6
Carub.0008s2007 Capsella rubella HOM05D005444 ORTHO05D006773 5.6e-14 81.3 44 86.4
Aa31sc23G420 Aethionema arabicum HOM05D005444 ORTHO05D006773 7.3e-14 80.9 44 84.1
BcaC04g19778 Brassica carinata HOM05D005444 ORTHO05D006773 9.5e-14 80.5 44 86.4
A10p16600 Brassica napus HOM05D005444 ORTHO05D006773 9.5e-14 80.5 44 86.4
C09p51810 Brassica napus HOM05D005444 ORTHO05D006773 9.5e-14 80.5 44 86.4
BolC9t58042H Brassica oleracea HOM05D005444 ORTHO05D006773 9.5e-14 80.5 44 86.4
BraA10t43744Z Brassica rapa HOM05D005444 ORTHO05D006773 9.5e-14 80.5 44 86.4
CARHR285770 Cardamine hirsuta HOM05D005444 ORTHO05D006773 9.5e-14 80.5 43 83.7
Sp6g21080 Schrenkiella parvula HOM05D005444 ORTHO05D006773 2.1e-13 79.3 46 82.6
BcaB08g36261 Brassica carinata HOM05D005444 ORTHO05D006773 6.2e-13 77.8 42 85.7
THA.LOC104810774 Tarenaya hassleriana HOM05D005444 ORTHO05D006773 7.5e-11 70.9 41 78.0
MD03G1090200 Malus domestica HOM05D005444 ORTHO05D006773 7.1e-09 64.3 41 68.3
FvH4_3g36480 Fragaria vesca HOM05D005444 ORTHO05D006773 9.2e-09 63.9 41 68.3
FAN11G0832 Fragaria x ananassa HOM05D005444 ORTHO05D006773 9.2e-09 63.9 41 68.3
FAN16G3284 Fragaria x ananassa HOM05D005444 ORTHO05D006773 9.2e-09 63.9 41 68.3
MD11G1099800 Malus domestica HOM05D005444 ORTHO05D006773 9.2e-09 63.9 41 68.3
Eucgr.B02353 Eucalyptus grandis HOM05D005444 ORTHO05D006773 1.2e-08 63.5 38 68.4
FAN21G3395 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.6e-08 63.2 41 68.3
QL01p031522 Quercus lobata HOM05D005444 ORTHO05D006773 2.1e-08 62.8 42 66.7
Cpa.g.sc81.131 Carica papaya HOM05D005444 ORTHO05D006773 2.7e-08 62.4 37 75.7
TPR.G34263 Trifolium pratense HOM05D005444 ORTHO05D006773 3.5e-08 62.0 38 68.4
Gohir.A07G098900 Gossypium hirsutum HOM05D005444 ORTHO05D006773 4.6e-08 61.6 38 71.1
Gohir.D07G103400 Gossypium hirsutum HOM05D005444 ORTHO05D006773 4.6e-08 61.6 38 71.1
Gorai.001G111300 Gossypium raimondii HOM05D005444 ORTHO05D006773 4.6e-08 61.6 38 71.1
Lsat_1_v5_gn_8_73500 Lactuca sativa HOM05D005444 ORTHO05D006773 4.6e-08 61.6 44 61.4
RcHm_v2.0_Chr5g0065341 Rosa chinensis HOM05D005444 ORTHO05D006773 6.0e-08 61.2 41 65.9
Glyma.13G336800 Glycine max HOM05D005444 ORTHO05D006773 7.8e-08 60.8 38 71.1
Ca_01319_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 1.3e-07 60.1 38 68.4
Dinv04178 Davidia involucrata HOM05D005444 ORTHO05D006773 1.3e-07 60.1 41 63.4
Glyma.15G037500 Glycine max HOM05D005444 ORTHO05D006773 1.3e-07 60.1 36 75.0
HanXRQChr06g0178811 Helianthus annuus HOM05D005444 ORTHO05D006773 1.3e-07 60.1 38 68.4
Thhalv10014435m.g Eutrema salsugineum HOM05D005444 ORTHO05D006773 1.7e-07 59.7 41 75.6
HanXRQChr05g0135061 Helianthus annuus HOM05D005444 ORTHO05D006773 1.7e-07 59.7 44 59.1
TWI79G0937 Tripterygium wilfordii HOM05D005444 ORTHO05D006773 2.3e-07 59.3 37 70.3
CANSAT54G1668 Cannabis sativa HOM05D005444 ORTHO05D006773 3.9e-07 58.5 38 73.7
VMungo1080G1107 Vigna mungo HOM05D000758 ORTHO05D002867 3.9e-07 58.5 38 68.4
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea HOM05D005444 ORTHO05D006773 5.1e-07 58.2 38 68.4
ECA236G0569 Erigeron canadensis HOM05D005444 ORTHO05D006773 5.1e-07 58.2 44 56.8
Lalb_Chr01g0003631 Lupinus albus HOM05D005444 ORTHO05D006773 5.1e-07 58.2 39 71.8
Medtr2g097230 Medicago truncatula HOM05D005444 ORTHO05D006773 5.1e-07 58.2 38 65.8
VMungo1127G0766 Vigna mungo HOM05D005444 ORTHO05D006773 5.1e-07 58.2 38 68.4
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea HOM05D005444 ORTHO05D006773 6.6e-07 57.8 38 68.4
Glyma.12G062600 Glycine max HOM05D005444 ORTHO05D006773 6.6e-07 57.8 38 68.4
PGR102G1676 Punica granatum HOM05D005444 ORTHO05D006773 6.6e-07 57.8 38 71.1
TPR.G1035 Trifolium pratense HOM05D005444 ORTHO05D006773 6.6e-07 57.8 38 68.4
TPR.G27777 Trifolium pratense HOM05D005444 ORTHO05D006773 6.6e-07 57.8 41 68.3
Atru.chr3.3946 Acer truncatum HOM05D005444 ORTHO05D006773 8.6e-07 57.4 41 61.0
COL.COLO4_18527 Corchorus olitorius HOM05D005444 ORTHO05D006773 8.6e-07 57.4 38 60.5
Manes.02G131500 Manihot esculenta HOM05D005444 ORTHO05D006773 8.6e-07 57.4 36 69.4
Sed0025445 Sechium edule HOM05D005444 ORTHO05D006773 8.6e-07 57.4 36 69.4
Hund04946 Selenicereus undatus HOM05D005444 ORTHO05D006773 1.5e-06 56.6 35 65.7
Phvul.L006243 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 1.9e-06 56.2 38 65.8
Phvul.011G063700 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 2.5e-06 55.8 38 65.8
Psat5g286680 Pisum sativum HOM05D005444 ORTHO05D006773 2.5e-06 55.8 38 63.2
ClCG03G001420 Citrullus lanatus HOM05D005444 ORTHO05D006773 3.3e-06 55.5 40 65.0
Sabra09G0022900 Salix brachista HOM05D005444 ORTHO05D006773 3.3e-06 55.5 36 69.4
Cfa011517 Carpinus fangiana HOM05D005444 ORTHO05D006773 4.3e-06 55.1 44 61.4
Haze_24114 Corylus avellana HOM05D005444 ORTHO05D006773 4.3e-06 55.1 44 61.4
MELO3C020623.2 Cucumis melo HOM05D005444 ORTHO05D006773 4.3e-06 55.1 36 66.7
CsaV3_1G034350 Cucumis sativus L. HOM05D005444 ORTHO05D006773 4.3e-06 55.1 36 66.7
CSS0026048 Camellia sinensis var. sinensis HOM05D005444 ORTHO05D006773 5.6e-06 54.7 38 63.2
AUR62001772 Chenopodium quinoa HOM05D005444 ORTHO05D006773 5.6e-06 54.7 38 60.5
AUR62009560 Chenopodium quinoa HOM05D005444 ORTHO05D006773 5.6e-06 54.7 38 60.5
Potri.001G241400 Populus trichocarpa HOM05D005444 ORTHO05D006773 5.6e-06 54.7 36 66.7


User provided reference genes

Program Settings