Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p13190 Brassica napus HOM05D000125 ORTHO05D019756 1.1e-74 283.1 134 100.0
BolC3t13780H Brassica oleracea HOM05D000125 ORTHO05D019756 3.4e-31 138.7 70 94.3
BraA03t10453Z Brassica rapa HOM05D000125 ORTHO05D000120 8.3e-30 134.0 114 59.6
C03p13140 Brassica napus HOM05D000125 ORTHO05D000120 5.4e-29 131.3 113 58.4
BolC3t13779H Brassica oleracea HOM05D000125 ORTHO05D000120 9.2e-29 130.6 114 58.8
AT4G01340 Arabidopsis thaliana HOM05D001988 ORTHO05D019756 2.4e-21 105.9 123 44.7
Carub.0002s1199 Capsella rubella HOM05D000125 ORTHO05D000120 3.3e-18 95.5 113 47.8
AL8G36490 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.2e-17 93.6 104 51.0
BolC3t16374H Brassica oleracea HOM05D000125 ORTHO05D000120 2.8e-17 92.4 174 33.3
CARHR273570 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.8e-17 92.4 128 42.2
BolC3t16358H Brassica oleracea HOM05D000125 ORTHO05D000120 1.4e-16 90.1 174 32.8
AT5G59940 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.8e-16 89.7 116 47.4
C03p40870 Brassica napus HOM05D000125 ORTHO05D000120 1.8e-16 89.7 174 33.3
AT4G01350 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.0e-16 88.6 132 44.7
BcaB04g19314 Brassica carinata HOM05D000125 ORTHO05D000120 4.0e-16 88.6 132 42.4
C03p40980 Brassica napus HOM05D000125 ORTHO05D000120 4.0e-16 88.6 174 32.8
C05p62670 Brassica napus HOM05D000125 ORTHO05D019756 6.8e-16 87.8 130 37.7
Carub.0008s2051 Capsella rubella HOM05D000125 ORTHO05D000120 8.9e-16 87.4 137 39.4
C03p41000 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-15 87.0 114 41.2
BolC3t16366H Brassica oleracea HOM05D000125 ORTHO05D000120 1.5e-15 86.7 135 42.2
C03p40930 Brassica napus HOM05D000125 ORTHO05D000120 2.0e-15 86.3 114 40.4
C03p40900 Brassica napus HOM05D000125 ORTHO05D000120 4.4e-15 85.1 114 41.2
BcaB08g36208 Brassica carinata HOM05D000125 ORTHO05D000120 5.8e-15 84.7 116 41.4
A01p40800 Brassica napus HOM05D000125 ORTHO05D000120 5.8e-15 84.7 126 38.1
BNapus_Darmor_BZH_scaffold_78p00910 Brassica napus HOM05D000125 ORTHO05D000120 5.8e-15 84.7 126 38.1
BolC1t05737H Brassica oleracea HOM05D000125 ORTHO05D000120 7.6e-15 84.3 126 38.9
BolC3t16386H Brassica oleracea HOM05D000125 ORTHO05D000120 1.3e-14 83.6 170 31.2
BcaC01g04363 Brassica carinata HOM05D000125 ORTHO05D000120 2.2e-14 82.8 127 38.6
Aa31sc23G30 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.1e-13 80.5 167 34.7
BcaC05g29929 Brassica carinata HOM05D000125 ORTHO05D000120 4.1e-13 78.6 131 36.6
BolC5t34920H Brassica oleracea HOM05D000125 ORTHO05D000120 4.1e-13 78.6 131 36.6
Carub.0006s2010 Capsella rubella HOM05D000125 ORTHO05D000120 5.4e-13 78.2 69 47.8
CARHR191180 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.2e-12 77.0 166 27.7
AT5G22355 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.5e-12 75.5 70 44.3
THA.LOC104813860 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 3.5e-12 75.5 74 45.9
BraA02t05751Z Brassica rapa HOM05D000125 ORTHO05D000120 4.6e-12 75.1 85 45.9
Aa31LG1G12050 Aethionema arabicum HOM05D000125 ORTHO05D000120 7.8e-12 74.3 111 44.1
Aa31sc1332G10 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.0e-11 73.9 114 41.2
BolC3t16361H Brassica oleracea HOM05D000125 ORTHO05D000120 1.0e-11 73.9 127 36.2
BolC5t34921H Brassica oleracea HOM05D000125 ORTHO05D000120 1.7e-11 73.2 125 38.4
AT5G59930 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.0e-11 72.4 69 55.1
C05p62680 Brassica napus HOM05D000125 ORTHO05D000120 6.6e-11 71.2 125 37.6
Thhalv10012095m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.9e-10 69.7 124 32.3
Aa31LG8G10680 Aethionema arabicum HOM05D000125 ORTHO05D000120 3.3e-10 68.9 126 36.5
AT4G11550 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.3e-10 67.8 72 38.9
C03p13180 Brassica napus HOM05D000125 ORTHO05D000120 7.3e-10 67.8 80 45.0
Carub.0002s1198 Capsella rubella HOM05D000125 ORTHO05D000120 9.6e-10 67.4 106 42.5
AT3G45840 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.2e-09 67.0 119 40.3
AT5G59920 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.2e-09 67.0 93 47.3
A03p11390 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-09 67.0 71 49.3
C03p40880 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-09 67.0 123 37.4
CARHR273550 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.2e-09 67.0 110 39.1
AL2G28240 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 3.6e-09 65.5 79 44.3
A02p06700 Brassica napus HOM05D000125 ORTHO05D000120 3.6e-09 65.5 83 37.3
AT3G43890 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.7e-09 65.1 79 46.8
Carub.0006s3056 Capsella rubella HOM05D000125 ORTHO05D000120 8.1e-09 64.3 117 29.9
Carub.0006s3058 Capsella rubella HOM05D000125 ORTHO05D000120 1.4e-08 63.5 72 36.1
Aa31LG1G12060 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.8e-08 63.2 105 39.0
A05p33680 Brassica napus HOM05D000125 ORTHO05D000120 1.8e-08 63.2 72 40.3
Carub.0008s0478 Capsella rubella HOM05D000125 ORTHO05D000120 2.4e-08 62.8 105 33.3
Thhalv10012912m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.4e-08 62.8 117 32.5
Carub.0006s2790 Capsella rubella HOM05D000125 ORTHO05D000120 3.1e-08 62.4 105 33.3
BraA09t37524Z Brassica rapa HOM05D000125 ORTHO05D000120 6.8e-08 61.2 71 46.5
Carub.0006s2817 Capsella rubella HOM05D000125 ORTHO05D000120 6.8e-08 61.2 73 38.4
CARHR273540 Cardamine hirsuta HOM05D000125 ORTHO05D000120 6.8e-08 61.2 95 36.8
Carub.0006s3031 Capsella rubella HOM05D000125 ORTHO05D000120 8.9e-08 60.8 69 43.5
AT4G11390 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.2e-07 60.5 109 31.2
A09p19060 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-07 60.5 71 46.5
AL6G50950 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 2.0e-07 59.7 74 32.4
Thhalv10002432m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.0e-07 59.7 118 33.9
AT4G01760 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.6e-07 59.3 75 37.3
AT1G65180 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.4e-07 58.9 74 40.5
AT4G02190 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.4e-07 58.9 74 32.4
BcaB07g31126 Brassica carinata HOM05D000125 ORTHO05D000120 3.4e-07 58.9 75 42.7
Carub.0007s3278 Capsella rubella HOM05D000125 ORTHO05D000120 3.4e-07 58.9 75 42.7
AL6G45800 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 4.4e-07 58.5 117 31.6
AL6G42990 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 5.8e-07 58.2 119 26.9
BcaC04g22836 Brassica carinata HOM05D000125 ORTHO05D000120 5.8e-07 58.2 128 34.4
C09p14810 Brassica napus HOM05D000125 ORTHO05D000120 5.8e-07 58.2 128 34.4
Carub.0006s3032 Capsella rubella HOM05D000125 ORTHO05D000120 7.6e-07 57.8 115 28.7
A09p01920 Brassica napus HOM05D000125 ORTHO05D000120 9.9e-07 57.4 76 39.5
THA.LOC104805437 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 9.9e-07 57.4 102 34.3
BcaC04g24045 Brassica carinata HOM05D000125 ORTHO05D000120 1.3e-06 57.0 119 30.3
A04p32500 Brassica napus HOM05D000125 ORTHO05D000120 1.3e-06 57.0 75 40.0
C09p01730 Brassica napus HOM05D000125 ORTHO05D000120 1.3e-06 57.0 119 30.3
BolC9t54381H Brassica oleracea HOM05D000125 ORTHO05D000120 1.7e-06 56.6 124 32.3
AL1G63440 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 2.2e-06 56.2 77 37.7
Carub.0002s1575 Capsella rubella HOM05D000125 ORTHO05D000120 2.2e-06 56.2 59 54.2
Carub.0006s3544 Capsella rubella HOM05D000125 ORTHO05D000120 2.2e-06 56.2 113 28.3
CARHR250390 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.2e-06 56.2 69 34.8
A09p01620 Brassica napus HOM05D000125 ORTHO05D000120 4.9e-06 55.1 116 29.3
BraA03t14976Z Brassica rapa HOM05D000125 ORTHO05D000120 4.9e-06 55.1 127 35.4
BraA09t35820Z Brassica rapa HOM05D000125 ORTHO05D000120 4.9e-06 55.1 119 30.3
Sp7g01410 Schrenkiella parvula HOM05D000125 ORTHO05D000120 4.9e-06 55.1 102 34.3
Carub.0006s3498 Capsella rubella HOM05D000125 ORTHO05D000120 6.4e-06 54.7 173 24.9
AT2G17590 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 8.4e-06 54.3 74 36.5
CARHR273530 Cardamine hirsuta HOM05D000125 ORTHO05D000120 8.4e-06 54.3 56 48.2


User provided reference genes

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