Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p13170 Brassica napus HOM05D004887 ORTHO05D006168 3.6e-38 161.0 75 100.0
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 2.3e-37 158.3 75 98.7
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 2.3e-37 158.3 75 98.7
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 2.3e-37 158.3 75 98.7
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 2.3e-37 158.3 75 98.7
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 2.3e-37 158.3 75 98.7
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 2.3e-37 158.3 75 98.7
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 3.0e-37 157.9 75 97.3
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 3.0e-37 157.9 75 97.3
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 3.0e-37 157.9 75 97.3
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 3.0e-37 157.9 75 97.3
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 5.1e-37 157.1 75 97.3
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 6.7e-37 156.8 75 97.3
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 1.1e-36 156.0 75 96.0
C06p04980 Brassica napus HOM05D004887 ORTHO05D006168 7.4e-36 153.3 75 94.7
A02p35440 Brassica napus HOM05D004887 ORTHO05D006168 1.7e-35 152.1 75 94.7
BolC6t35622H Brassica oleracea HOM05D004887 ORTHO05D006168 1.7e-35 152.1 76 96.1
BraA02t08545Z Brassica rapa HOM05D004887 ORTHO05D006168 1.7e-35 152.1 75 94.7
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 2.8e-35 151.4 75 90.7
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 6.9e-34 146.7 73 90.4
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 5.9e-33 143.7 102 72.5
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 5.0e-32 140.6 78 83.3
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 6.5e-32 140.2 74 87.8
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 8.5e-32 139.8 73 86.3
BolC3t13778H Brassica oleracea HOM05D004887 ORTHO05D006168 1.9e-31 138.7 63 100.0
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 1.9e-31 138.7 73 84.9
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 2.5e-31 138.3 73 83.6
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 3.2e-31 137.9 73 84.9
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 3.2e-31 137.9 72 83.3
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 9.4e-31 136.3 70 87.1
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 9.4e-31 136.3 73 82.2
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 9.4e-31 136.3 73 82.2
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 9.4e-31 136.3 73 83.6
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 1.2e-30 136.0 78 80.8
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 1.6e-30 135.6 74 82.4
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 1.6e-30 135.6 73 80.8
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 2.1e-30 135.2 73 83.6
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 2.1e-30 135.2 70 85.7
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 2.7e-30 134.8 74 81.1
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 2.7e-30 134.8 73 82.2
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 3.6e-30 134.4 73 84.9
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 3.6e-30 134.4 73 82.2
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 3.6e-30 134.4 73 82.2
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 6.1e-30 133.7 74 81.1
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 6.1e-30 133.7 70 85.7
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 7.9e-30 133.3 73 80.8
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 7.9e-30 133.3 73 82.2
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 7.9e-30 133.3 70 82.9
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 1.0e-29 132.9 69 84.1
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 1.4e-29 132.5 70 84.3
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.8e-29 132.1 70 84.3
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 1.8e-29 132.1 91 73.6
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 1.8e-29 132.1 70 80.0
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 3.0e-29 131.3 70 82.9
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 3.9e-29 131.0 69 81.2
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 3.9e-29 131.0 73 80.8
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 5.1e-29 130.6 70 80.0
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 5.1e-29 130.6 73 79.5
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 5.1e-29 130.6 70 82.9
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 6.7e-29 130.2 77 76.6
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 6.7e-29 130.2 70 78.6
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 6.7e-29 130.2 73 80.8
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 8.8e-29 129.8 70 81.4
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 8.8e-29 129.8 66 84.8
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 8.8e-29 129.8 78 78.2
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 1.1e-28 129.4 71 81.7
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.5e-28 129.0 78 76.9
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 1.5e-28 129.0 78 75.6
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 1.5e-28 129.0 73 76.7
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 2.0e-28 128.6 70 82.9
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 2.6e-28 128.3 74 74.3
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.6e-28 128.3 73 79.5
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 2.6e-28 128.3 73 80.8
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 3.3e-28 127.9 69 81.2
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 3.3e-28 127.9 75 76.0
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 4.4e-28 127.5 65 86.2
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 4.4e-28 127.5 78 73.1
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 7.4e-28 126.7 73 76.7
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 7.4e-28 126.7 73 78.1
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 7.4e-28 126.7 72 79.2
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 7.4e-28 126.7 72 79.2
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.3e-27 125.9 73 76.7
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 1.3e-27 125.9 73 74.0
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 1.3e-27 125.9 73 74.0
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 1.3e-27 125.9 73 71.2
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 1.7e-27 125.6 75 77.3
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 1.7e-27 125.6 73 78.1
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 1.7e-27 125.6 70 80.0
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 1.7e-27 125.6 70 78.6
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 1.7e-27 125.6 70 77.1
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 2.2e-27 125.2 65 84.6
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 2.2e-27 125.2 75 73.3
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 2.8e-27 124.8 73 74.0
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 4.8e-27 124.0 74 71.6
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 6.3e-27 123.6 72 75.0
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 8.2e-27 123.2 66 78.8
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 1.1e-26 122.9 66 78.8
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 1.4e-26 122.5 72 76.4
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 1.4e-26 122.5 67 80.6
Carub.0008s2068 Capsella rubella HOM05D004887 ORTHO05D006168 1.8e-26 122.1 76 80.3
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 2.4e-26 121.7 66 77.3
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 2.4e-26 121.7 69 78.3
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 3.1e-26 121.3 66 78.8
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 3.1e-26 121.3 73 74.0
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 4.1e-26 120.9 73 74.0
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 7.0e-26 120.2 72 72.2
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 9.1e-26 119.8 78 70.5
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 7.7e-25 116.7 78 67.9
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 2.9e-24 114.8 72 69.4
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 8.5e-24 113.2 55 87.3
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 3.7e-19 97.8 65 64.6
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 1.8e-18 95.5 65 63.1
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 7.7e-17 90.1 60 68.3
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 8.5e-16 86.7 64 62.5
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 1.1e-15 86.3 75 57.3
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 4.7e-14 80.9 38 94.7
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 6.8e-13 77.0 37 89.2
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 4.8e-11 70.9 55 60.0
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 4.1e-10 67.8 70 51.4


User provided reference genes

Program Settings