Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 1.9e-98 362.5 178 100.0
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 5.2e-96 354.4 176 98.3
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 1.7e-94 349.4 178 94.9
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 2.9e-94 348.6 178 94.9
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 3.0e-91 338.6 177 93.2
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 2.3e-88 328.9 169 93.5
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 2.3e-88 328.9 177 91.5
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 1.9e-85 319.3 178 86.0
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 2.4e-85 318.9 178 87.1
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 2.7e-84 315.5 178 83.7
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 6.0e-84 314.3 178 83.7
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 5.0e-83 311.2 173 86.1
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 6.8e-80 300.8 179 79.9
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 1.2e-79 300.1 178 78.1
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.5e-79 299.7 175 82.9
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.5e-79 299.7 175 82.9
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 2.6e-79 298.9 178 78.7
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 3.4e-79 298.5 165 86.7
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 7.5e-79 297.4 165 86.7
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 1.4e-77 293.1 175 80.0
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 4.1e-77 291.6 176 77.8
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 1.0e-75 287.0 174 76.4
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 1.7e-75 286.2 177 73.4
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 3.9e-75 285.0 177 75.1
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 3.9e-75 285.0 168 75.0
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 6.6e-75 284.3 174 75.3
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 8.6e-75 283.9 172 73.8
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 1.5e-74 283.1 174 74.7
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 2.5e-74 282.3 173 74.6
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 7.3e-74 280.8 173 74.6
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 1.2e-73 280.0 169 75.7
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 2.1e-73 279.3 172 75.6
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 2.1e-73 279.3 174 73.0
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 2.8e-73 278.9 170 73.5
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 3.6e-73 278.5 179 73.7
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 3.6e-73 278.5 174 72.4
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 3.6e-73 278.5 168 74.4
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 4.7e-73 278.1 168 75.0
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 4.7e-73 278.1 174 73.0
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 6.2e-73 277.7 170 73.5
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 6.2e-73 277.7 172 73.8
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 8.1e-73 277.3 168 75.6
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 1.4e-72 276.6 172 75.0
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.3e-72 275.8 159 83.0
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 3.1e-72 275.4 167 74.9
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 5.2e-72 274.6 171 71.9
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 8.9e-72 273.9 166 75.3
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 8.9e-72 273.9 166 75.3
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 1.5e-71 273.1 174 72.4
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 2.0e-71 272.7 166 74.1
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 2.0e-71 272.7 168 73.2
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 2.6e-71 272.3 168 73.8
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 2.6e-71 272.3 177 72.9
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 2.6e-71 272.3 167 73.7
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 2.6e-71 272.3 188 69.7
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 4.4e-71 271.6 168 74.4
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 4.4e-71 271.6 177 69.5
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 4.4e-71 271.6 168 73.2
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 7.6e-71 270.8 174 69.5
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 7.6e-71 270.8 174 71.3
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 9.9e-71 270.4 174 72.4
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 9.9e-71 270.4 167 74.3
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 9.9e-71 270.4 167 74.3
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 1.3e-70 270.0 169 71.0
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 1.3e-70 270.0 174 71.3
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 1.3e-70 270.0 167 73.7
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 1.7e-70 269.6 172 72.7
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.7e-70 269.6 169 71.6
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 1.7e-70 269.6 174 70.7
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 2.2e-70 269.2 166 72.9
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 2.2e-70 269.2 169 72.8
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 2.2e-70 269.2 169 72.8
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 2.2e-70 269.2 169 70.4
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 2.9e-70 268.9 169 71.0
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 2.9e-70 268.9 168 73.2
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 2.9e-70 268.9 168 73.2
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 2.9e-70 268.9 169 74.0
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 3.8e-70 268.5 166 73.5
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 3.8e-70 268.5 168 72.0
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 3.8e-70 268.5 168 72.0
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 3.8e-70 268.5 173 70.5
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 4.9e-70 268.1 171 70.2
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 4.9e-70 268.1 174 69.5
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 6.4e-70 267.7 174 71.3
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 6.4e-70 267.7 168 72.6
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 8.4e-70 267.3 168 73.2
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 8.4e-70 267.3 168 72.6
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 8.4e-70 267.3 168 72.0
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.1e-69 266.9 172 70.3
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 1.1e-69 266.9 168 72.6
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 1.9e-69 266.2 167 73.1
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.9e-69 266.2 168 71.4
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.4e-69 265.8 168 72.0
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 3.2e-69 265.4 175 69.7
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 4.1e-69 265.0 168 71.4
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 4.1e-69 265.0 175 67.4
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 5.4e-69 264.6 168 71.4
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 7.1e-69 264.2 168 71.4
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 1.2e-68 263.5 207 61.8
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 1.2e-68 263.5 168 71.4
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 1.6e-68 263.1 168 70.8
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 1.6e-68 263.1 168 70.8
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 1.6e-68 263.1 166 71.7
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 2.1e-68 262.7 168 70.2
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 2.7e-68 262.3 167 70.7
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 2.7e-68 262.3 168 70.2
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 4.6e-68 261.5 168 70.2
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 6.0e-68 261.2 168 70.8
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 1.3e-67 260.0 169 73.4
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 3.0e-67 258.8 173 67.1
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 6.6e-67 257.7 162 72.8
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 6.6e-67 257.7 167 68.9
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 1.1e-66 256.9 168 67.3
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 2.5e-66 255.8 174 67.8
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 9.6e-66 253.8 168 67.9
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 1.2e-65 253.4 167 70.1
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 2.1e-65 252.7 157 76.4
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 8.1e-65 250.8 153 75.2
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 8.1e-65 250.8 170 67.6
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 1.1e-64 250.4 169 65.1
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.6e-63 245.7 238 54.2
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 6.4e-62 241.1 168 65.5
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 5.4e-61 238.0 174 64.4
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 4.6e-60 235.0 168 65.5
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 6.0e-60 234.6 174 63.2
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 7.8e-60 234.2 164 65.2
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 5.1e-59 231.5 165 63.6
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 7.3e-58 227.6 176 61.9
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 7.3e-58 227.6 167 62.3
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 4.0e-56 221.9 180 59.4
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 4.0e-56 221.9 169 63.3
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 2.0e-55 219.5 170 59.4
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 6.4e-54 214.5 168 59.5
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 2.4e-53 212.6 165 57.6
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 2.1e-52 209.5 167 56.3
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 2.9e-46 189.1 177 52.0
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 6.0e-44 181.4 107 76.6
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 3.0e-43 179.1 123 68.3
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.3e-41 173.7 109 73.4
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-41 173.3 111 69.4
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 2.6e-39 166.0 106 71.7
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 2.2e-38 162.9 101 70.3
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 1.1e-37 160.6 168 49.4
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.9e-37 159.8 85 85.9
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 3.2e-37 159.1 101 69.3
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 9.3e-37 157.5 104 72.1
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 9.3e-37 157.5 101 69.3
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 2.3e-35 152.9 108 66.7
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 1.9e-34 149.8 173 48.6
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 3.1e-32 142.5 108 60.2
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 3.1e-32 142.5 108 60.2
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 7.2e-29 131.3 174 45.4
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 2.5e-26 122.9 157 37.6
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 2.9e-22 109.4 73 67.1
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 3.2e-21 105.9 137 46.7
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 3.2e-21 105.9 123 46.3
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 1.1e-18 97.4 186 30.6
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 1.4e-16 90.5 67 64.2
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 4.1e-16 89.0 63 65.1
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 8.5e-14 81.3 79 50.6
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.0e-11 74.3 60 55.0
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 3.9e-11 72.4 66 51.5
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 9.7e-10 67.8 35 85.7
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.3e-09 67.4 61 57.4
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 3.1e-08 62.8 51 60.8


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