Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 3.0e-191 671.8 357 100.0
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 1.1e-190 669.8 357 99.7
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 4.7e-189 664.5 357 98.9
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 2.4e-177 625.5 364 92.9
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 9.2e-177 623.6 365 92.6
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 3.4e-171 605.1 361 91.1
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 4.3e-150 535.0 377 79.0
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 1.0e-143 513.8 370 78.6
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 1.8e-143 513.1 371 77.6
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 2.5e-142 509.2 371 77.4
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 4.0e-140 501.9 372 76.6
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 1.6e-133 479.9 382 70.4
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 3.1e-124 449.1 354 71.5
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 4.2e-105 385.6 344 64.8
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 4.8e-93 345.5 364 57.4
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 6.3e-93 345.1 374 54.3
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 5.9e-91 338.6 371 55.8
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 1.1e-89 334.3 368 54.3
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 7.2e-89 331.6 359 54.9
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 1.6e-88 330.5 249 73.9
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 2.1e-88 330.1 367 54.0
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 8.0e-88 328.2 387 53.5
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 1.0e-87 327.8 360 54.2
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 3.0e-87 326.2 365 52.6
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.2e-86 324.3 363 52.3
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 2.0e-86 323.6 384 51.6
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 4.4e-86 322.4 387 52.2
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 5.7e-86 322.0 363 52.1
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 6.3e-85 318.5 379 50.4
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 1.4e-84 317.4 381 52.0
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 2.4e-84 316.6 373 52.5
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 9.2e-84 314.7 359 52.6
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 9.2e-84 314.7 383 52.0
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.6e-83 313.9 377 50.1
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.6e-83 313.9 355 54.6
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 2.0e-83 313.5 385 49.6
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.0e-82 308.9 375 51.2
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 1.5e-81 307.4 382 48.7
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.5e-81 307.4 375 51.5
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 3.3e-81 306.2 373 50.1
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 4.3e-81 305.8 382 50.8
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 2.1e-80 303.5 370 50.0
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 2.8e-80 303.1 227 74.0
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 2.8e-80 303.1 367 49.0
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 2.8e-80 303.1 358 48.3
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 4.7e-80 302.4 359 48.5
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 3.0e-79 299.7 370 50.5
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 4.0e-79 299.3 358 50.3
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 5.2e-79 298.9 382 50.0
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 6.8e-79 298.5 370 49.7
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 8.9e-79 298.1 381 50.4
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 1.2e-78 297.7 366 52.2
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 5.7e-78 295.4 362 48.9
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 7.5e-78 295.0 379 51.2
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 3.7e-77 292.7 377 48.0
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 6.4e-77 292.0 374 48.1
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 1.4e-76 290.8 410 47.1
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 4.1e-76 289.3 357 49.6
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 4.1e-76 289.3 371 49.9
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 4.1e-76 289.3 409 47.9
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 5.4e-76 288.9 376 49.7
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 7.0e-76 288.5 362 50.8
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.0e-74 284.6 392 48.7
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 2.3e-74 283.5 362 50.6
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 3.0e-74 283.1 371 48.8
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 6.6e-74 282.0 357 48.5
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.5e-73 280.8 276 58.7
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 2.5e-73 280.0 460 40.9
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.2e-72 277.7 408 44.6
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 6.4e-69 265.4 373 47.5
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 9.2e-68 261.5 330 49.7
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 7.8e-67 258.5 286 50.3
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.3e-66 257.7 229 57.6
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 2.3e-66 256.9 361 44.6
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 1.9e-65 253.8 369 46.3
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 1.8e-63 247.3 374 43.9
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.0e-62 243.8 286 49.0
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 3.2e-60 236.5 255 51.4
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 7.8e-59 231.9 242 54.1
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 3.0e-58 229.9 273 48.4
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.9e-57 227.3 231 56.7
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 1.2e-56 224.6 360 44.2
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 1.2e-56 224.6 368 42.7
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.4e-55 221.1 250 49.6
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 1.8e-55 220.7 363 40.8
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 4.0e-55 219.5 222 51.4
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 5.2e-55 219.2 385 40.0
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 8.9e-55 218.4 290 43.4
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 1.3e-53 214.5 471 38.6
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 2.2e-53 213.8 372 41.1
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.1e-52 211.5 247 49.0
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 1.7e-50 204.1 287 43.2
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 3.0e-50 203.4 262 48.5
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 3.0e-50 203.4 147 68.0
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 3.0e-50 203.4 266 46.6
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 4.3e-49 199.5 343 42.0
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 4.3e-49 199.5 298 43.6
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 4.7e-48 196.1 209 61.7
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 9.9e-46 188.3 189 61.4
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 2.2e-45 187.2 152 70.4
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 2.2e-45 187.2 152 70.4
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 3.0e-42 176.8 312 43.3
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 3.9e-42 176.4 285 45.3
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 5.1e-42 176.0 392 35.2
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 1.1e-41 174.9 276 42.8
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 9.6e-41 171.8 226 44.7
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 9.6e-41 171.8 236 45.8
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 6.9e-39 165.6 390 36.7
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 1.2e-38 164.9 244 43.9
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 2.6e-38 163.7 380 35.0
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 7.9e-35 152.1 276 41.3
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 2.1e-32 144.1 336 31.8
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 6.2e-32 142.5 144 54.2
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 1.5e-25 121.3 200 41.0
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.3e-21 108.2 222 37.4
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.5e-19 100.1 65 73.8
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 7.9e-19 99.0 100 52.0
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 2.3e-18 97.4 73 71.2
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 3.0e-18 97.1 76 73.7
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 1.1e-17 95.1 138 50.7
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 1.1e-17 95.1 138 50.7
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 4.3e-17 93.2 93 58.1
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 1.4e-15 88.2 280 29.3
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 5.0e-13 79.7 91 50.5
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 7.2e-12 75.9 92 46.7
BcaC04g19543 Brassica carinata HOM05D006712 ORTHO05D008219 9.3e-12 75.5 40 95.0
Cre08.g362850 Chlamydomonas reinhardtii HOM05D006712 ORTHO05D008219 5.9e-06 56.2 147 27.9


User provided reference genes

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