Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 1.9e-92 342.8 211 100.0
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 2.8e-80 302.4 212 91.5
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 2.8e-80 302.4 212 91.5
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 3.4e-70 268.9 214 84.1
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 9.3e-68 260.8 215 80.9
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 6.6e-66 254.6 218 77.5
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 1.1e-65 253.8 212 78.3
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 5.6e-65 251.5 211 78.7
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 5.6e-65 251.5 211 78.7
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.6e-64 250.0 213 80.3
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.1e-64 249.6 211 74.9
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 2.4e-63 246.1 213 74.6
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 2.0e-62 243.0 211 74.4
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 2.0e-62 243.0 211 74.4
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 4.2e-60 235.3 212 71.7
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 6.7e-58 228.0 213 70.4
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 4.8e-48 195.3 212 59.4
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 2.4e-47 193.0 99 100.0
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 6.7e-42 174.9 149 71.1
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 1.6e-35 153.7 170 59.4
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 7.9e-35 151.4 192 56.2
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 3.9e-34 149.1 169 56.8
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 6.7e-34 148.3 176 54.5
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 6.7e-34 148.3 173 56.1
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 8.8e-34 147.9 164 64.6
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.0e-33 146.7 169 57.4
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.5e-33 146.4 171 54.4
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 2.5e-33 146.4 169 55.6
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 4.3e-33 145.6 177 54.2
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 4.3e-33 145.6 166 58.4
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 5.7e-33 145.2 164 57.9
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 9.7e-33 144.4 171 55.6
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 9.7e-33 144.4 168 54.2
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 1.7e-32 143.7 171 59.1
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 2.2e-32 143.3 176 58.0
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.2e-32 143.3 166 57.8
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.8e-32 142.9 169 56.2
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 2.8e-32 142.9 169 56.2
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 3.7e-32 142.5 176 57.4
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 3.7e-32 142.5 208 49.5
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 4.8e-32 142.1 180 55.6
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 4.8e-32 142.1 168 57.1
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 8.2e-32 141.4 164 56.7
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 8.2e-32 141.4 169 57.4
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 2.4e-31 139.8 163 56.4
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 4.1e-31 139.0 163 52.1
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 6.9e-31 138.3 152 50.7
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 6.9e-31 138.3 168 50.6
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 1.2e-30 137.5 171 56.1
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.5e-30 137.1 164 57.3
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 2.6e-30 136.3 171 55.6
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 3.4e-30 136.0 151 58.9
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 3.4e-30 136.0 168 51.8
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 3.4e-30 136.0 167 56.9
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 4.5e-30 135.6 192 51.0
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 4.5e-30 135.6 168 56.5
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 4.5e-30 135.6 168 54.2
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 4.5e-30 135.6 166 53.0
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 7.7e-30 134.8 186 52.7
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.0e-29 134.4 184 51.1
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.7e-29 133.7 168 53.6
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 2.2e-29 133.3 166 54.8
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 2.2e-29 133.3 168 53.0
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 5.0e-29 132.1 168 55.4
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 6.5e-29 131.7 154 58.4
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 6.5e-29 131.7 167 49.7
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 6.5e-29 131.7 190 50.5
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 8.5e-29 131.3 150 64.0
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 8.5e-29 131.3 194 51.0
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.4e-28 130.6 194 50.5
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 2.5e-28 129.8 169 53.8
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 3.2e-28 129.4 167 56.3
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 5.5e-28 128.6 168 52.4
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.2e-27 127.5 215 48.8
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.6e-27 127.1 160 53.1
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 2.1e-27 126.7 163 52.8
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.7e-27 126.3 152 52.6
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 3.6e-27 125.9 164 56.1
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 1.8e-26 123.6 190 46.3
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 1.8e-26 123.6 189 50.3
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 3.9e-26 122.5 191 49.7
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 8.8e-26 121.3 149 55.7
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.5e-25 120.6 160 50.6
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.3e-24 117.5 161 50.9
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 2.2e-24 116.7 193 46.1
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.8e-24 116.3 168 50.6
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 8.2e-24 114.8 168 53.6
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 3.1e-23 112.8 169 48.5
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 5.3e-23 112.1 154 44.8
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 7.0e-23 111.7 119 61.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.6e-22 109.8 169 46.2
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.7e-21 107.1 119 64.7
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 2.2e-21 106.7 190 45.3
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.1e-20 104.4 188 38.3
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 3.0e-18 96.3 162 50.0
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.6e-17 93.2 99 48.5
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.3e-17 92.8 98 52.0
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.0e-13 81.3 189 36.0
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 8.5e-13 78.2 116 57.8
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 1.6e-11 73.9 96 63.5
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 6.1e-11 72.0 75 52.0
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.8e-10 70.5 150 38.7
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 4.0e-10 69.3 109 50.5
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 1.4e-07 60.8 181 38.7
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 1.8e-07 60.5 143 40.6
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 3.1e-07 59.7 75 41.3
A02p06060 Brassica napus HOM05D007192 ORTHO05D009034 2.7e-06 56.6 30 90.0
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 7.7e-06 55.1 39 71.8


User provided reference genes

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