Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 1.6e-129 466.1 238 100.0
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 1.1e-128 463.4 236 100.0
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 4.0e-128 461.5 238 98.7
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 3.0e-123 445.3 239 94.6
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 3.7e-121 438.3 239 95.4
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 3.7e-121 438.3 239 95.4
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 2.2e-118 429.1 242 91.7
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 4.2e-117 424.9 242 90.9
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 3.9e-115 418.3 242 90.1
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 3.9e-115 418.3 242 90.1
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 3.9e-115 418.3 242 90.1
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 3.3e-114 415.2 242 88.8
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 1.3e-113 413.3 238 89.9
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 1.3e-113 413.3 238 89.9
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 3.7e-113 411.8 242 88.0
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 1.5e-111 406.4 243 87.7
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 2.6e-111 405.6 242 86.8
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 2.2e-110 402.5 241 87.1
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 9.4e-101 370.5 242 78.1
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 5.7e-98 361.3 243 74.9
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 6.5e-86 321.2 238 67.2
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 1.5e-85 320.1 234 67.1
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 8.8e-83 310.8 234 63.7
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 4.8e-81 305.1 236 66.1
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 8.2e-81 304.3 248 62.5
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 3.1e-80 302.4 237 64.6
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 3.1e-80 302.4 238 62.2
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 7.0e-80 301.2 238 63.9
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 7.7e-79 297.7 236 64.4
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 1.0e-78 297.4 221 65.2
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.3e-78 297.0 236 63.6
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 1.3e-78 297.0 236 63.6
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 1.7e-78 296.6 234 63.2
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 2.2e-78 296.2 225 64.0
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 5.0e-78 295.0 201 71.1
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 1.1e-77 293.9 228 64.9
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.1e-77 293.9 234 62.0
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 1.1e-77 293.9 237 62.9
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 1.9e-77 293.1 237 61.6
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 1.9e-77 293.1 237 61.6
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 1.9e-77 293.1 235 63.4
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 2.5e-77 292.7 234 61.5
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 3.2e-77 292.4 208 68.8
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.2e-77 292.4 239 63.2
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 5.5e-77 291.6 186 73.1
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 5.5e-77 291.6 223 63.2
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 2.1e-76 289.7 234 61.5
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 2.7e-76 289.3 249 59.8
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 3.6e-76 288.9 236 59.7
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 4.7e-76 288.5 243 61.3
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 6.1e-76 288.1 237 59.9
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.0e-75 287.3 238 60.9
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 1.8e-75 286.6 236 61.4
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 3.0e-75 285.8 232 62.1
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 6.8e-75 284.6 189 68.8
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 1.2e-74 283.9 243 60.1
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 3.4e-74 282.3 241 60.6
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 3.4e-74 282.3 235 60.4
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 4.4e-74 282.0 241 60.2
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 7.5e-74 281.2 243 60.5
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 9.8e-74 280.8 247 57.1
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 2.8e-73 279.3 213 63.4
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 2.8e-73 279.3 204 65.7
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 2.8e-73 279.3 199 65.3
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 8.3e-73 277.7 236 58.9
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.4e-72 276.9 235 60.9
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 5.4e-72 275.0 228 59.2
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 5.4e-72 275.0 244 58.2
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 4.5e-71 271.9 230 59.1
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 5.9e-71 271.6 241 60.2
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 7.7e-71 271.2 225 60.0
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 1.3e-70 270.4 191 66.0
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 1.7e-70 270.0 236 59.3
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 2.9e-70 269.2 200 64.5
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 8.6e-70 267.7 176 71.6
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 1.9e-69 266.5 173 69.9
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 2.5e-69 266.2 246 55.7
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 3.3e-69 265.8 237 59.1
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 9.5e-69 264.2 257 57.2
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 1.6e-68 263.5 243 55.1
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 4.7e-68 261.9 226 58.4
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 6.1e-68 261.5 175 68.6
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 8.0e-68 261.2 219 60.7
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 5.2e-67 258.5 179 65.9
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 6.8e-67 258.1 158 75.3
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 6.8e-67 258.1 215 61.4
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.6e-66 256.1 245 54.7
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 4.4e-66 255.4 212 59.9
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 5.7e-66 255.0 231 55.0
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 4.9e-65 251.9 218 58.7
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 4.1e-64 248.8 171 66.1
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 1.2e-63 247.3 214 58.4
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 2.0e-63 246.5 179 62.0
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 7.8e-63 244.6 174 67.2
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 1.7e-62 243.4 236 54.2
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 4.3e-61 238.8 176 62.5
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 8.0e-60 234.6 154 68.8
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 7.5e-58 228.0 238 55.5
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 9.8e-58 227.6 198 59.1
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 2.3e-51 206.5 172 53.5
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 3.1e-51 206.1 177 58.2
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 2.2e-49 199.9 122 73.8
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 9.2e-48 194.5 192 54.7
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 4.6e-47 192.2 204 43.1
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 6.0e-47 191.8 164 51.8
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 5.1e-46 188.7 220 46.4
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.1e-45 187.6 187 52.4
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 3.3e-45 186.0 164 53.0
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 6.8e-43 178.3 129 64.3
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 7.5e-42 174.9 129 62.8
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 1.3e-41 174.1 112 72.3
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 2.5e-29 133.3 173 41.6
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 8.1e-28 128.3 134 49.3
Oeu014126.1 Olea europaea HOM05D006422 ORTHO05D007992 4.4e-26 122.5 93 62.4
Cre12.g502250 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 3.2e-24 116.3 188 37.2
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 5.4e-24 115.5 208 35.1
A03p19890 Brassica napus HOM05D006422 ORTHO05D007992 3.6e-20 102.8 75 82.7
PRCOL_00004658 Prasinoderma coloniale HOM05D006422 ORTHO05D007992 3.1e-19 99.8 200 35.5
BraA05t20619Z Brassica rapa HOM05D006422 ORTHO05D007992 4.0e-19 99.4 75 81.3
BraA10t44366Z Brassica rapa HOM05D006422 ORTHO05D007992 4.0e-19 99.4 75 81.3
A10p22970 Brassica napus HOM05D006422 ORTHO05D007992 1.2e-18 97.8 74 81.1
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.4e-16 90.9 177 28.2
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 3.2e-16 89.7 120 46.7
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 4.5e-10 69.3 192 27.1
CDE02G1133 Ceratophyllum demersum HOM05D003483 ORTHO05D004101 6.4e-09 65.5 171 26.3
MELO3C010097.2 Cucumis melo HOM05D003483 ORTHO05D004101 1.4e-08 64.3 174 28.2
PGR142G1721 Punica granatum HOM05D003483 ORTHO05D004101 7.1e-08 62.0 216 26.4
CSS0026849 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.2e-07 61.2 173 28.9
AagrBONN_evm.TU.Sc2ySwM_344.1832 Anthoceros agrestis HOM05D003483 ORTHO05D004101 1.6e-07 60.8 165 29.1
Lj9A307T41 Lonicera japonica HOM05D003483 ORTHO05D004101 1.6e-07 60.8 180 26.7
TAR381G1595 Trochodendron aralioides HOM05D003483 ORTHO05D004101 1.6e-07 60.8 174 27.0
Pp3c23_15450 Physcomitrium patens HOM05D003483 ORTHO05D004101 2.1e-07 60.5 185 26.5
MBI03_g28296_MAGBIO Magnolia biondii HOM05D003483 ORTHO05D004101 2.7e-07 60.1 217 26.3
CsaV3_1G045010 Cucumis sativus L. HOM05D003483 ORTHO05D004101 3.5e-07 59.7 174 27.0
AT3G26070 Arabidopsis thaliana HOM05D003483 ORTHO05D004101 4.6e-07 59.3 213 26.8
Nn1g08897 Nelumbo nucifera HOM05D003483 ORTHO05D004101 4.6e-07 59.3 183 24.6
HanXRQChr06g0185051 Helianthus annuus HOM05D003483 ORTHO05D004101 6.0e-07 58.9 167 26.3
Peaxi162Scf00011g00242 Petunia axillaris HOM05D003483 ORTHO05D004101 6.0e-07 58.9 176 27.3
Potri.003G020700 Populus trichocarpa HOM05D003483 ORTHO05D004101 6.0e-07 58.9 170 28.8
Migut.N01039 Erythranthe guttata HOM05D003483 ORTHO05D004101 7.9e-07 58.5 182 25.3
PGSC0003DMG400023753 Solanum tuberosum HOM05D003483 ORTHO05D004101 7.9e-07 58.5 176 29.0
Aa31LG2G6290 Aethionema arabicum HOM05D003483 ORTHO05D004101 1.0e-06 58.2 213 25.8
ATR0684G013 Amborella trichopoda HOM05D003483 ORTHO05D004101 1.3e-06 57.8 173 26.6
MSTRG.5236 Avicennia marina HOM05D003483 ORTHO05D004101 1.3e-06 57.8 173 28.3
MD15G1421500 Malus domestica HOM05D003483 ORTHO05D004101 1.3e-06 57.8 179 25.1
TAR376G1167 Trochodendron aralioides HOM05D003483 ORTHO05D004101 1.3e-06 57.8 169 27.8
AL5G14750 Arabidopsis lyrata HOM05D003483 ORTHO05D004101 1.8e-06 57.4 213 26.8
Dinv19357 Davidia involucrata HOM05D003483 ORTHO05D004101 1.8e-06 57.4 220 23.6
ECA240G0807 Erigeron canadensis HOM05D003483 ORTHO05D004101 1.8e-06 57.4 172 26.7
SalBow6G7247 Salvia bowleyana HOM05D003483 ORTHO05D004101 1.8e-06 57.4 231 26.8
VMungo0540G1714 Vigna mungo HOM05D003483 ORTHO05D004101 1.8e-06 57.4 173 28.3
GSVIVG01022995001 Vitis vinifera HOM05D003483 ORTHO05D004101 1.8e-06 57.4 171 26.3
FvH4_5g29660 Fragaria vesca HOM05D003483 ORTHO05D004101 2.3e-06 57.0 251 24.3
Hma1.2p1_0557F.1_g178380 Hydrangea macrophylla HOM05D003483 ORTHO05D004101 2.3e-06 57.0 258 23.3
Carub.0005s0393 Capsella rubella HOM05D003483 ORTHO05D004101 3.0e-06 56.6 171 26.9
ECA240G4797 Erigeron canadensis HOM05D003483 ORTHO05D008021 3.0e-06 56.6 178 24.7
Thhalv10004837m.g Eutrema salsugineum HOM05D003483 ORTHO05D004101 3.0e-06 56.6 213 26.8
RcHm_v2.0_Chr7g0222941 Rosa chinensis HOM05D003483 ORTHO05D004101 3.0e-06 56.6 249 23.7
SalBow6G5560 Salvia bowleyana HOM05D003483 ORTHO05D004101 3.0e-06 56.6 231 26.4
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 3.0e-06 56.6 171 28.1
Glyma.08G185800 Glycine max HOM05D003483 ORTHO05D004101 3.9e-06 56.2 179 24.6
Potri.001G209600 Populus trichocarpa HOM05D003483 ORTHO05D004101 3.9e-06 56.2 183 24.6
Cc02_g22380 Coffea canephora HOM05D003483 ORTHO05D004101 5.1e-06 55.8 179 23.5
TWI59G0966 Tripterygium wilfordii HOM05D003483 ORTHO05D004101 5.1e-06 55.8 175 26.3
vmacro01768 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 5.1e-06 55.8 265 23.8
Ciclev10002308m.g Citrus clementina HOM05D003483 ORTHO05D004101 6.7e-06 55.5 166 27.1
FAN18G3047 Fragaria x ananassa HOM05D003483 ORTHO05D004101 6.7e-06 55.5 252 25.0
Lj6g0022843 Lotus japonicus HOM05D003483 ORTHO05D004101 6.7e-06 55.5 235 26.0
Actinidia39049 Actinidia chinensis HOM05D003483 ORTHO05D004101 8.7e-06 55.1 169 26.0
Lsat_1_v5_gn_9_118261 Lactuca sativa HOM05D003483 ORTHO05D004101 8.7e-06 55.1 174 24.7
Sp2g15270 Schrenkiella parvula HOM05D003483 ORTHO05D004101 8.7e-06 55.1 171 26.9
THA.LOC104825685 Tarenaya hassleriana HOM05D003483 ORTHO05D004101 8.7e-06 55.1 172 25.0
unitig_699.g19861 Utricularia gibba HOM05D003483 ORTHO05D004101 8.7e-06 55.1 170 25.3


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