Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 4.6e-101 371.3 199 100.0
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.0e-100 370.2 199 99.5
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 1.8e-97 359.4 200 97.5
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 2.5e-91 339.0 204 92.6
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 2.5e-91 339.0 204 92.6
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.9e-78 296.2 212 82.5
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.0e-68 262.3 213 76.1
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 4.5e-64 248.4 217 71.9
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 2.8e-58 229.2 220 67.3
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 5.5e-54 214.9 216 63.4
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 5.5e-54 214.9 224 62.9
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 2.7e-53 212.6 216 64.4
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 1.1e-49 200.7 216 64.4
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 5.5e-46 188.3 221 60.2
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 6.3e-42 174.9 213 56.8
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 6.3e-42 174.9 213 56.8
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 1.1e-41 174.1 173 63.0
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 9.4e-38 161.0 211 55.9
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.3e-36 156.4 218 53.2
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.7e-34 150.2 212 51.4
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 1.2e-32 144.1 134 67.2
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 1.2e-32 144.1 134 67.2
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 2.0e-32 143.3 133 67.7
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 2.0e-32 143.3 133 67.7
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.3e-31 140.6 216 49.5
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.7e-31 140.2 209 50.7
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 2.9e-31 139.4 213 48.8
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 3.8e-31 139.0 218 47.7
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 6.5e-31 138.3 209 50.7
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.5e-30 136.3 216 47.2
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 7.2e-30 134.8 210 45.2
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 2.1e-29 133.3 181 55.8
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 4.7e-29 132.1 217 45.6
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 6.1e-29 131.7 222 47.7
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.0e-28 131.0 217 44.7
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 3.0e-28 129.4 196 45.4
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 4.0e-28 129.0 216 47.2
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 8.8e-28 127.9 210 44.8
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 8.8e-28 127.9 221 47.1
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.0e-27 126.7 196 44.9
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.4e-27 125.9 211 46.4
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 3.4e-27 125.9 220 47.7
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 4.4e-27 125.6 211 43.6
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 4.4e-27 125.6 221 46.2
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 4.4e-27 125.6 209 45.9
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 9.8e-27 124.4 218 45.0
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 9.8e-27 124.4 216 42.6
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.3e-26 124.0 192 46.9
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.2e-26 123.2 198 48.0
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 6.3e-26 121.7 210 45.2
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 8.3e-26 121.3 218 42.2
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 8.3e-26 121.3 206 46.1
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.1e-25 120.9 213 44.6
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.1e-25 120.9 209 45.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.8e-25 120.2 204 44.6
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.4e-25 119.8 223 43.9
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 4.1e-25 119.0 217 43.8
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 5.4e-25 118.6 206 43.7
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 5.4e-25 118.6 202 42.6
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.6e-24 117.1 187 47.6
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 2.0e-24 116.7 210 41.4
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 2.7e-24 116.3 194 46.4
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.7e-24 116.3 200 46.5
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.7e-24 116.3 186 46.8
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.5e-24 115.5 216 45.4
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 5.9e-24 115.2 201 41.8
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 7.8e-24 114.8 201 42.3
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.0e-23 114.4 196 45.9
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 2.9e-23 112.8 216 43.1
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.8e-23 112.5 213 42.7
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.8e-23 112.5 213 44.1
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.8e-23 112.5 226 42.5
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 6.6e-23 111.7 216 42.1
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 6.6e-23 111.7 188 45.2
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.1e-22 110.9 226 42.5
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.1e-22 110.9 226 42.5
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.5e-22 110.5 202 40.6
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 2.5e-22 109.8 216 43.5
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 3.3e-22 109.4 193 45.6
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 3.3e-22 109.4 217 40.6
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 4.3e-22 109.0 204 40.7
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 5.6e-22 108.6 193 45.6
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.2e-21 107.5 202 43.6
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.6e-21 107.1 217 40.1
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 3.6e-21 105.9 209 44.0
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 3.6e-21 105.9 200 44.5
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 4.7e-21 105.5 219 40.2
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.0e-21 104.8 193 44.6
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 8.0e-21 104.8 193 42.5
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 8.0e-21 104.8 229 40.6
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.4e-20 104.0 198 38.4
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 3.0e-20 102.8 203 40.9
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 4.0e-20 102.4 219 38.8
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 8.9e-20 101.3 192 40.1
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.2e-19 100.9 221 39.8
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.5e-19 100.5 197 41.1
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.0e-19 100.1 218 40.8
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 2.6e-19 99.8 153 49.0
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 3.4e-19 99.4 220 41.4
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 4.4e-19 99.0 199 43.2
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 2.2e-18 96.7 212 39.6
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.9e-18 96.3 205 40.0
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 6.4e-18 95.1 192 41.7
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 6.4e-18 95.1 187 39.6
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.4e-18 95.1 184 41.3
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 8.3e-18 94.7 212 38.2
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.8e-17 93.6 188 41.5
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.4e-17 93.2 138 43.5
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.4e-17 93.2 138 43.5
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 5.4e-17 92.0 229 36.2
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.2e-16 90.9 206 36.4
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.6e-16 90.5 213 37.6
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.0e-16 90.1 194 40.2
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.3e-15 87.4 220 36.8
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 5.0e-15 85.5 192 39.1
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.5e-14 83.2 195 36.4
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 4.3e-14 82.4 207 37.7
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 1.6e-13 80.5 267 33.7
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.8e-13 79.7 195 37.4
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.5e-11 73.9 168 36.9
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.6e-11 73.2 127 48.8
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.2e-10 70.1 199 39.2
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 5.4e-09 65.5 152 39.5
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.7e-08 63.2 171 35.7
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 4.6e-08 62.4 191 29.3
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 3.9e-07 59.3 178 33.1
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 2.5e-06 56.6 83 51.8
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 2.5e-06 56.6 108 38.9


User provided reference genes

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