Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p09680 Brassica napus HOM05D009160 ORTHO05D009596 1.6e-64 249.2 121 100.0
BcaB01g05195 Brassica carinata HOM05D009160 ORTHO05D009596 6.1e-64 247.3 121 99.2
BolC3t13456H Brassica oleracea HOM05D009160 ORTHO05D009596 8.8e-63 243.4 121 97.5
BraA03t10150Z Brassica rapa HOM05D009160 ORTHO05D009596 1.7e-61 239.2 121 95.9
A03p08310 Brassica napus HOM05D009160 ORTHO05D009596 4.1e-60 234.6 121 93.4
C03p09690 Brassica napus HOM05D009160 ORTHO05D009596 8.0e-56 220.3 121 86.8
C03p09660 Brassica napus HOM05D009160 ORTHO05D009596 4.0e-55 218.0 121 86.0
BcaB01g05201 Brassica carinata HOM05D009160 ORTHO05D009596 8.8e-55 216.9 121 83.5
BolC3t13454H Brassica oleracea HOM05D009160 ORTHO05D009596 8.8e-55 216.9 121 86.0
BolC3t13462H Brassica oleracea HOM05D009160 ORTHO05D009596 8.8e-55 216.9 121 83.5
BolC3t13458H Brassica oleracea HOM05D009160 ORTHO05D009596 2.6e-54 215.3 121 85.1
BraA03t10152Z Brassica rapa HOM05D009160 ORTHO05D009596 2.6e-54 215.3 121 85.1
C03p09720 Brassica napus HOM05D009160 ORTHO05D009596 3.3e-54 214.9 121 83.5
BcaB01g05193 Brassica carinata HOM05D009160 ORTHO05D009596 4.4e-54 214.5 120 83.3
C03p09670 Brassica napus HOM05D009160 ORTHO05D009596 4.4e-54 214.5 120 83.3
BolC3t13455H Brassica oleracea HOM05D009160 ORTHO05D009596 4.4e-54 214.5 120 83.3
A03p08340 Brassica napus HOM05D009160 ORTHO05D009596 5.7e-54 214.2 121 82.6
BraA03t10149Z Brassica rapa HOM05D009160 ORTHO05D009596 8.2e-53 210.3 125 82.4
BcaB01g04931 Brassica carinata HOM05D009160 ORTHO05D009596 4.1e-52 208.0 121 80.2
BcaB01g04930 Brassica carinata HOM05D009160 ORTHO05D009596 9.1e-52 206.8 121 79.3
A03p08300 Brassica napus HOM05D009160 ORTHO05D009596 9.1e-52 206.8 120 80.0
BcaB01g04928 Brassica carinata HOM05D009160 ORTHO05D009596 2.7e-51 205.3 121 79.3
BcaB01g04929 Brassica carinata HOM05D009160 ORTHO05D009596 2.7e-51 205.3 121 78.5
BcaB01g04927 Brassica carinata HOM05D009160 ORTHO05D009596 3.5e-51 204.9 121 78.5
BcaB01g04933 Brassica carinata HOM05D009160 ORTHO05D009596 2.2e-50 202.2 123 79.7
BcaB01g05200 Brassica carinata HOM05D009160 ORTHO05D009596 6.5e-50 200.7 120 79.2
BolC3t13461H Brassica oleracea HOM05D009160 ORTHO05D009596 6.5e-50 200.7 120 79.2
C03p09710 Brassica napus HOM05D009160 ORTHO05D009596 1.5e-49 199.5 120 79.2
A03p08320 Brassica napus HOM05D009160 ORTHO05D009596 6.1e-48 194.1 106 84.9
Thhalv10015886m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 3.5e-27 125.2 120 55.0
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 3.9e-26 121.7 125 51.2
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 3.9e-26 121.7 125 51.2
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.3e-23 112.5 126 49.2
BcaB01g04926 Brassica carinata HOM05D009160 ORTHO05D009596 2.2e-21 105.9 79 69.6
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 1.1e-17 93.6 122 43.4
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 2.9e-13 79.0 160 33.8
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 3.2e-12 75.5 161 37.9
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 3.2e-12 75.5 136 36.0
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 9.2e-12 73.9 158 35.4
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 2.7e-11 72.4 155 35.5
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 2.7e-11 72.4 160 33.1
BcaC09g51570 Brassica carinata HOM05D009029 ORTHO05D009596 2.7e-11 72.4 140 36.4
C09p59860 Brassica napus HOM05D009029 ORTHO05D009596 2.7e-11 72.4 140 36.4
BolC1t01146H Brassica oleracea HOM05D009029 ORTHO05D009596 2.7e-11 72.4 140 36.4
Carub.0006s1554 Capsella rubella HOM05D009029 ORTHO05D009596 2.7e-11 72.4 148 36.5
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 2.7e-11 72.4 162 30.2
A10p22070 Brassica napus HOM05D009029 ORTHO05D009596 3.5e-11 72.0 140 36.4
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 6.0e-11 71.2 83 45.8
C09p59840 Brassica napus HOM05D009029 ORTHO05D009596 7.8e-11 70.9 139 36.0
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 3.0e-10 68.9 160 31.9
BolC9t58822H Brassica oleracea HOM05D009029 ORTHO05D009596 8.6e-10 67.4 138 35.5
BraA10t44266Z Brassica rapa HOM05D009029 ORTHO05D009596 8.6e-10 67.4 137 35.8
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 1.1e-09 67.0 160 31.2
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 1.1e-09 67.0 160 31.2
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 1.1e-09 67.0 160 31.2
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 1.1e-09 67.0 160 31.2
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 3.3e-09 65.5 160 30.6
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 3.6e-08 62.0 151 30.5
THA.LOC104820858 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 2.3e-07 59.3 87 32.2
BraA10t44265Z Brassica rapa HOM05D009029 ORTHO05D009596 3.4e-06 55.5 71 39.4
THA.LOC104827231 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 3.4e-06 55.5 146 29.5
BcaC04g18803 Brassica carinata HOM05D009029 ORTHO05D009596 4.4e-06 55.1 140 34.3


User provided reference genes

Program Settings