Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p08460 Brassica napus HOM05D000754 ORTHO05D000169 2.2e-85 318.9 160 100.0
BolC3t13351H Brassica oleracea HOM05D000754 ORTHO05D000169 2.2e-85 318.9 160 100.0
BolC3t13350H Brassica oleracea HOM05D000754 ORTHO05D000169 5.2e-79 297.7 193 81.9
BraA03t10062Z Brassica rapa HOM05D000754 ORTHO05D000169 1.3e-69 266.5 194 74.7
A03p07380 Brassica napus HOM05D000754 ORTHO05D000169 3.7e-69 265.0 194 74.2
C03p08600 Brassica napus HOM05D000754 ORTHO05D000169 1.9e-65 252.7 194 72.2
BolC3t13363H Brassica oleracea HOM05D000754 ORTHO05D000169 1.9e-65 252.7 194 72.2
BcaB01g05023 Brassica carinata HOM05D000754 ORTHO05D000169 9.5e-65 250.4 181 73.5
BcaNung02206 Brassica carinata HOM05D000754 ORTHO05D000169 2.6e-62 242.3 193 66.3
A02p03250 Brassica napus HOM05D000754 ORTHO05D000169 1.3e-58 229.9 194 67.0
BraA02t05296Z Brassica rapa HOM05D000754 ORTHO05D000169 1.3e-58 229.9 194 67.0
Sp6g28280 Schrenkiella parvula HOM05D000754 ORTHO05D000169 3.9e-58 228.4 196 65.8
BcaC03g18454 Brassica carinata HOM05D000754 ORTHO05D000169 5.1e-58 228.0 193 66.3
C02p08010 Brassica napus HOM05D000754 ORTHO05D000169 5.1e-58 228.0 193 66.3
BolC2t06723H Brassica oleracea HOM05D000754 ORTHO05D000169 5.1e-58 228.0 193 66.3
Thhalv10015835m.g Eutrema salsugineum HOM05D000754 ORTHO05D000169 2.3e-55 219.2 194 64.9
BcaB08g36864 Brassica carinata HOM05D000754 ORTHO05D000169 5.2e-55 218.0 193 63.2
BcaC03g18453 Brassica carinata HOM05D000754 ORTHO05D000169 1.2e-54 216.9 193 65.3
AT5G15830 Arabidopsis thaliana HOM05D000754 ORTHO05D000169 4.1e-52 208.4 194 60.8
A10p23180 Brassica napus HOM05D000754 ORTHO05D000169 6.2e-48 194.5 193 63.2
BraA10t44387Z Brassica rapa HOM05D000754 ORTHO05D000169 6.2e-48 194.5 193 63.2
C09p61230 Brassica napus HOM05D000754 ORTHO05D000169 4.0e-47 191.8 193 61.7
BcaC04g18931 Brassica carinata HOM05D000754 ORTHO05D000169 3.4e-46 188.7 193 61.1
BolC9t58965H Brassica oleracea HOM05D000754 ORTHO05D000169 3.4e-46 188.7 193 61.1
C03p08410 Brassica napus HOM05D010948 ORTHO05D000169 9.2e-44 180.6 89 100.0
AL6G26700 Arabidopsis lyrata HOM05D000754 ORTHO05D000169 4.6e-43 178.3 194 55.7
Carub.0006s1399 Capsella rubella HOM05D000754 ORTHO05D000169 6.9e-39 164.5 193 50.8
CARHR197490 Cardamine hirsuta HOM05D000754 ORTHO05D000169 1.3e-34 150.2 195 50.3
THA.LOC104827146 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 5.6e-17 91.7 145 44.8
THA.LOC104820972 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 1.6e-16 90.1 150 44.0
THA.LOC104802988 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 8.7e-10 67.8 148 39.2
AUR62023129 Chenopodium quinoa HOM05D000754 ORTHO05D000169 1.1e-09 67.4 153 38.6
COL.COLO4_25886 Corchorus olitorius HOM05D000754 ORTHO05D000169 1.1e-09 67.4 123 39.0
MD09G1078300 Malus domestica HOM05D000754 ORTHO05D000169 2.5e-09 66.2 110 39.1
AUR62009445 Chenopodium quinoa HOM05D000754 ORTHO05D000169 4.3e-09 65.5 153 37.9
AT3G30530 Arabidopsis thaliana HOM05D000754 ORTHO05D000169 5.7e-09 65.1 48 66.7
Lj2g0020906 Lotus japonicus HOM05D000754 ORTHO05D000169 9.7e-09 64.3 48 64.6
Thecc.04G111400 Theobroma cacao HOM05D000754 ORTHO05D000169 9.7e-09 64.3 137 38.0
Prupe.3G246000 Prunus persica HOM05D000754 ORTHO05D000169 1.3e-08 63.9 116 36.2
SalBow1G5412 Salvia bowleyana HOM05D000754 ORTHO05D000169 1.3e-08 63.9 115 40.0
SalBow1G7982 Salvia bowleyana HOM05D000754 ORTHO05D000169 1.3e-08 63.9 115 40.0
Ah.16g100800 Amaranthus hybridus HOM05D000754 ORTHO05D000169 1.6e-08 63.5 152 34.9
EL10Ac2g04403 Beta vulgaris HOM05D000754 ORTHO05D000169 1.6e-08 63.5 124 39.5
CiPaw.03G080600 Carya illinoinensis HOM05D000754 ORTHO05D000169 1.6e-08 63.5 111 39.6
Glyma.13G050700 Glycine max HOM05D000754 ORTHO05D000169 1.6e-08 63.5 119 37.0
HanXRQChr12g0380111 Helianthus annuus HOM05D000754 ORTHO05D000169 1.6e-08 63.5 122 36.1
QL02p063727 Quercus lobata HOM05D000754 ORTHO05D000169 1.6e-08 63.5 110 40.0
Actinidia26284 Actinidia chinensis HOM05D000754 ORTHO05D000169 2.2e-08 63.2 94 40.4
Ah.10g038390 Amaranthus hybridus HOM05D000754 ORTHO05D000169 2.2e-08 63.2 124 39.5
Migut.K00877 Erythranthe guttata HOM05D000754 ORTHO05D000169 2.2e-08 63.2 129 34.1
Solyc02g089420.1 Solanum lycopersicum HOM05D000754 ORTHO05D000169 2.2e-08 63.2 132 38.6
Sopen02g034180 Solanum pennellii HOM05D000754 ORTHO05D000169 2.2e-08 63.2 132 38.6
Glyma.19G037900 Glycine max HOM05D000754 ORTHO05D000169 2.8e-08 62.8 139 33.1
CSS0015963 Camellia sinensis var. sinensis HOM05D000754 ORTHO05D000169 3.7e-08 62.4 121 38.0
Eucgr.J01431 Eucalyptus grandis HOM05D000754 ORTHO05D000169 3.7e-08 62.4 48 60.4
Gohir.A07G177900 Gossypium hirsutum HOM05D000754 ORTHO05D000169 3.7e-08 62.4 80 43.8
Gohir.D07G185300 Gossypium hirsutum HOM05D000754 ORTHO05D000169 3.7e-08 62.4 80 43.8
Gorai.001G205800 Gossypium raimondii HOM05D000754 ORTHO05D000169 3.7e-08 62.4 80 43.8
Aa31LG2G3680 Aethionema arabicum HOM05D000754 ORTHO05D000169 4.8e-08 62.0 48 62.5
Carub.0005s0865 Capsella rubella HOM05D000754 ORTHO05D000169 4.8e-08 62.0 75 46.7
Glyma.08G254400 Glycine max HOM05D000754 ORTHO05D000169 4.8e-08 62.0 48 62.5
Peaxi162Scf00479g01010 Petunia axillaris HOM05D000754 ORTHO05D000169 4.8e-08 62.0 131 32.1
Dinv34888 Davidia involucrata HOM05D000754 ORTHO05D000169 6.3e-08 61.6 110 39.1
Gohir.A08G052100 Gossypium hirsutum HOM05D000754 ORTHO05D000169 6.3e-08 61.6 115 34.8
Sp2g18200 Schrenkiella parvula HOM05D000754 ORTHO05D000169 6.3e-08 61.6 75 46.7
VMungo1383G0648 Vigna mungo HOM05D000754 ORTHO05D000169 6.3e-08 61.6 48 62.5
MELO3C022062.2 Cucumis melo HOM05D000754 ORTHO05D000169 8.2e-08 61.2 75 42.7
CsaV3_5G038820 Cucumis sativus L. HOM05D000754 ORTHO05D000169 8.2e-08 61.2 75 42.7
Hma1.2p1_0588F.1_g184570 Hydrangea macrophylla HOM05D000754 ORTHO05D000169 8.2e-08 61.2 75 44.0
Lalb_Chr10g0092521 Lupinus albus HOM05D000754 ORTHO05D000169 8.2e-08 61.2 48 62.5
Nitab4.5_0009468g0030 Nicotiana tabacum HOM05D000754 ORTHO05D000169 8.2e-08 61.2 93 39.8
Peaxi162Scf00020g02019 Petunia axillaris HOM05D000754 ORTHO05D000169 8.2e-08 61.2 130 37.7
TWI34G1117 Tripterygium wilfordii HOM05D000754 ORTHO05D000169 8.2e-08 61.2 75 45.3
Actinidia18098 Actinidia chinensis HOM05D000754 ORTHO05D000169 1.1e-07 60.8 93 37.6
Eucgr.I02090 Eucalyptus grandis HOM05D000754 ORTHO05D000169 1.1e-07 60.8 95 41.1
Glyma.18G277100 Glycine max HOM05D000754 ORTHO05D000169 1.1e-07 60.8 48 62.5
Rhsim10G0061200 Rhododendron simsii HOM05D000754 ORTHO05D000169 1.1e-07 60.8 142 34.5
AL5G20370 Arabidopsis lyrata HOM05D000754 ORTHO05D000169 1.4e-07 60.5 48 62.5
MSTRG.23849 Avicennia marina HOM05D000754 ORTHO05D000169 1.4e-07 60.5 75 45.3
CANSAT64G0760 Cannabis sativa HOM05D000754 ORTHO05D000169 1.4e-07 60.5 86 38.4
Nitab4.5_0002171g0070 Nicotiana tabacum HOM05D000754 ORTHO05D000169 1.4e-07 60.5 93 38.7
Medtr6g016375 Medicago truncatula HOM05D000754 ORTHO05D000169 1.8e-07 60.1 93 37.6
Potri.004G111100 Populus trichocarpa HOM05D000754 ORTHO05D000169 1.8e-07 60.1 130 35.4
PGSC0003DMG400001387 Solanum tuberosum HOM05D000754 ORTHO05D000169 1.8e-07 60.1 132 37.9
C02p56080 Brassica napus HOM05D000754 ORTHO05D000169 2.4e-07 59.7 153 34.6
BolC2t11663H Brassica oleracea HOM05D000754 ORTHO05D000169 2.4e-07 59.7 153 34.6
ClCG11G005070 Citrullus lanatus HOM05D000754 ORTHO05D000169 2.4e-07 59.7 75 41.3
Sabra17G0089600 Salix brachista HOM05D000754 ORTHO05D000169 2.4e-07 59.7 93 36.6
Sed0014710 Sechium edule HOM05D000754 ORTHO05D000169 2.4e-07 59.7 75 40.0
SGA_v2.0_scaffold4G02347 Striga asiatica HOM05D000754 ORTHO05D000169 2.4e-07 59.7 66 47.0
Cc07_g04710 Coffea canephora HOM05D000754 ORTHO05D000169 3.1e-07 59.3 144 36.1
MD17G1068700 Malus domestica HOM05D000754 ORTHO05D000169 3.1e-07 59.3 108 37.0
RcHm_v2.0_Chr2g0164231 Rosa chinensis HOM05D000754 ORTHO05D000169 3.1e-07 59.3 126 32.5
THA.LOC104805225 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 3.1e-07 59.3 48 60.4
BcaB07g30063 Brassica carinata HOM05D000754 ORTHO05D000169 4.1e-07 58.9 116 37.1
A02p37080 Brassica napus HOM05D000754 ORTHO05D000169 4.1e-07 58.9 152 34.9
BraA02t08694Z Brassica rapa HOM05D000754 ORTHO05D000169 4.1e-07 58.9 152 34.9
CSS0006079 Camellia sinensis var. sinensis HOM05D000754 ORTHO05D000169 4.1e-07 58.9 123 36.6
DCAR_007539 Daucus carota HOM05D000754 ORTHO05D000169 4.1e-07 58.9 129 32.6
Duzib138G1070 Durio zibethinus HOM05D000754 ORTHO05D000169 4.1e-07 58.9 144 35.4
TPR.G15933 Trifolium pratense HOM05D000754 ORTHO05D000169 4.1e-07 58.9 93 37.6
Thhalv10005423m.g Eutrema salsugineum HOM05D000754 ORTHO05D000169 5.3e-07 58.5 117 35.0
Gohir.D08G061700 Gossypium hirsutum HOM05D000754 ORTHO05D000169 5.3e-07 58.5 115 34.8
Gorai.004G063800 Gossypium raimondii HOM05D000754 ORTHO05D000169 5.3e-07 58.5 115 34.8
Psat1g064080 Pisum sativum HOM05D000754 ORTHO05D000169 5.3e-07 58.5 122 33.6
CAN.G497.38 Capsicum annuum HOM05D000754 ORTHO05D000169 6.9e-07 58.2 144 35.4
Medtr7g017880 Medicago truncatula HOM05D000754 ORTHO05D000169 6.9e-07 58.2 93 36.6
Oeu040621.1 Olea europaea HOM05D000754 ORTHO05D000169 6.9e-07 58.2 145 35.9
Phvul.008G023800 Phaseolus vulgaris HOM05D000754 ORTHO05D000169 6.9e-07 58.2 93 37.6
SGA_v2.0_scaffold52G19045 Striga asiatica HOM05D000754 ORTHO05D000169 6.9e-07 58.2 141 32.6
VMungo0464G1909 Vigna mungo HOM05D000754 ORTHO05D000169 6.9e-07 58.2 113 33.6
Cpa.g.sc70.1 Carica papaya HOM05D000754 ORTHO05D000169 9.0e-07 57.8 93 36.6
Cfa007722 Carpinus fangiana HOM05D000754 ORTHO05D000169 9.0e-07 57.8 118 38.1
CiPaw.04G050700 Carya illinoinensis HOM05D000754 ORTHO05D000169 9.0e-07 57.8 93 37.6
Haze_14352 Corylus avellana HOM05D000754 ORTHO05D000169 9.0e-07 57.8 118 38.1
FvH4_6g46000 Fragaria vesca HOM05D000754 ORTHO05D000169 9.0e-07 57.8 108 35.2
FAN02G2810 Fragaria x ananassa HOM05D000754 ORTHO05D000169 9.0e-07 57.8 108 35.2
FAN14G4628 Fragaria x ananassa HOM05D000754 ORTHO05D000169 9.0e-07 57.8 108 35.2
MD16G1052300 Malus domestica HOM05D000754 ORTHO05D000169 9.0e-07 57.8 86 38.4
Manes.01G105400 Manihot esculenta HOM05D000754 ORTHO05D000169 9.0e-07 57.8 112 33.9
THA.LOC104805539 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 9.0e-07 57.8 75 45.3
TAR371G0899 Trochodendron aralioides HOM05D000754 ORTHO05D000169 9.0e-07 57.8 75 41.3
Atru.chr8.701 Acer truncatum HOM05D000754 ORTHO05D000169 1.2e-06 57.4 86 41.9
Ca_20752_v3 Cicer arietinum L. HOM05D000754 ORTHO05D000169 1.2e-06 57.4 93 35.5
Ciclev10013334m.g Citrus clementina HOM05D000754 ORTHO05D000169 1.2e-06 57.4 48 56.2
MELO3C018916.2 Cucumis melo HOM05D000754 ORTHO05D000169 1.2e-06 57.4 93 35.5
THA.LOC104822719 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 1.2e-06 57.4 93 38.7
Ca_05159_v3 Cicer arietinum L. HOM05D000754 ORTHO05D000169 1.5e-06 57.0 63 49.2
Lsat_1_v5_gn_3_95361 Lactuca sativa HOM05D000754 ORTHO05D000169 1.5e-06 57.0 108 36.1
PGR042G0306 Punica granatum HOM05D000754 ORTHO05D000169 1.5e-06 57.0 90 36.7
TPR.G3247 Trifolium pratense HOM05D000754 ORTHO05D000169 1.5e-06 57.0 93 36.6
TWI60G0987 Tripterygium wilfordii HOM05D000754 ORTHO05D000169 1.5e-06 57.0 78 39.7
Atru.chr11.1506 Acer truncatum HOM05D000754 ORTHO05D000169 2.0e-06 56.6 48 58.3
AT5G38800 Arabidopsis thaliana HOM05D000754 ORTHO05D000169 2.0e-06 56.6 75 41.3
ClCG07G016170 Citrullus lanatus HOM05D000754 ORTHO05D000169 2.0e-06 56.6 152 31.6
Migut.H00570 Erythranthe guttata HOM05D000754 ORTHO05D000169 2.0e-06 56.6 126 32.5
FAN05G0125 Fragaria x ananassa HOM05D000754 ORTHO05D000169 2.0e-06 56.6 108 35.2
Gohir.A03G107700 Gossypium hirsutum HOM05D000754 ORTHO05D000169 2.0e-06 56.6 94 35.1
Lsat_1_v5_gn_4_174860 Lactuca sativa HOM05D000754 ORTHO05D000169 2.0e-06 56.6 145 30.3
Phvul.004G045800 Phaseolus vulgaris HOM05D000754 ORTHO05D000169 2.0e-06 56.6 93 36.6
Sc10g0000460 Simmondsia chinensis HOM05D000754 ORTHO05D000169 2.0e-06 56.6 127 39.4
Duzib133G1197 Durio zibethinus HOM05D000754 ORTHO05D000169 2.6e-06 56.2 126 32.5
Gohir.D02G132700 Gossypium hirsutum HOM05D000754 ORTHO05D000169 2.6e-06 56.2 94 35.1
Gorai.005G148600 Gossypium raimondii HOM05D000754 ORTHO05D000169 2.6e-06 56.2 94 35.1
Lsat_1_v5_gn_3_95540 Lactuca sativa HOM05D000754 ORTHO05D000169 2.6e-06 56.2 111 33.3
A06p39670 Brassica napus HOM05D000754 ORTHO05D000169 3.4e-06 55.8 114 34.2
BraA06t26882Z Brassica rapa HOM05D000754 ORTHO05D000169 3.4e-06 55.8 114 34.2
Peaxi162Scf00188g00066 Petunia axillaris HOM05D000754 ORTHO05D000169 3.4e-06 55.8 68 42.6
Phvul.002G110600 Phaseolus vulgaris HOM05D000754 ORTHO05D000169 3.4e-06 55.8 48 58.3
Dinv16576 Davidia involucrata HOM05D000754 ORTHO05D000169 4.5e-06 55.5 68 44.1
Duzib211G0554 Durio zibethinus HOM05D000754 ORTHO05D000169 4.5e-06 55.5 147 32.7
ECA232G0212 Erigeron canadensis HOM05D000754 ORTHO05D000169 4.5e-06 55.5 148 31.1
Lalb_Chr10g0099381 Lupinus albus HOM05D000754 ORTHO05D000169 4.5e-06 55.5 122 32.8
Nitab4.5_0000154g0070 Nicotiana tabacum HOM05D000754 ORTHO05D000169 4.5e-06 55.5 73 45.2
Psat3g194240 Pisum sativum HOM05D000754 ORTHO05D000169 4.5e-06 55.5 160 32.5
BcaC06g30843 Brassica carinata HOM05D000754 ORTHO05D000169 5.9e-06 55.1 114 34.2
Lju361C12T1 Lonicera japonica HOM05D000754 ORTHO05D000169 5.9e-06 55.1 110 37.3
Manes.02G061900 Manihot esculenta HOM05D000754 ORTHO05D000169 5.9e-06 55.1 123 35.8
Psat2g081360 Pisum sativum HOM05D000754 ORTHO05D000169 5.9e-06 55.1 68 42.6
Potri.017G106700 Populus trichocarpa HOM05D000754 ORTHO05D000169 5.9e-06 55.1 93 34.4
Aqoxy3G00579 Aquilegia oxysepala HOM05D000754 ORTHO05D000169 7.7e-06 54.7 93 35.5
CANSAT64G1826 Cannabis sativa HOM05D000754 ORTHO05D000169 7.7e-06 54.7 72 41.7
DCAR_010997 Daucus carota HOM05D000754 ORTHO05D000169 7.7e-06 54.7 75 38.7
Medtr7g029400 Medicago truncatula HOM05D000754 ORTHO05D000169 7.7e-06 54.7 97 38.1
Nitab4.5_0000027g0550 Nicotiana tabacum HOM05D000754 ORTHO05D000169 7.7e-06 54.7 48 56.2
Atru.chr1.3765 Acer truncatum HOM05D000754 ORTHO05D000169 1.0e-05 54.3 48 58.3
Ah.03g138200 Amaranthus hybridus HOM05D000754 ORTHO05D012960 1.0e-05 54.3 48 56.2
BcaC06g33726 Brassica carinata HOM05D000754 ORTHO05D000169 1.0e-05 54.3 114 33.3
C07p38620 Brassica napus HOM05D000754 ORTHO05D000169 1.0e-05 54.3 114 33.3
BolC7t44383H Brassica oleracea HOM05D000754 ORTHO05D000169 1.0e-05 54.3 114 33.3
Ca_23553_v3 Cicer arietinum L. HOM05D000754 ORTHO05D000169 1.0e-05 54.3 157 32.5
Ca_29802_v3 Cicer arietinum L. HOM05D000754 ORTHO05D000169 1.0e-05 54.3 157 32.5
MD13G1053800 Malus domestica HOM05D000754 ORTHO05D000169 1.0e-05 54.3 48 50.0
PGR004G0996 Punica granatum HOM05D000754 ORTHO05D000169 1.0e-05 54.3 93 34.4
GSVIVG01010152001 Vitis vinifera HOM05D000754 ORTHO05D000169 1.0e-05 54.3 75 41.3


User provided reference genes

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