Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p08160 Brassica napus HOM05D010061 ORTHO05D014864 7.5e-217 756.9 384 100.0
BolC3t13313H Brassica oleracea HOM05D010061 ORTHO05D014864 2.9e-184 648.7 385 88.1
BraA03t10039Z Brassica rapa HOM05D010061 ORTHO05D014864 1.1e-180 636.7 386 86.8
A03p07170 Brassica napus HOM05D010061 ORTHO05D014864 4.3e-180 634.8 386 86.8
BcaB01g05050 Brassica carinata HOM05D010061 ORTHO05D014864 2.8e-171 605.5 384 83.3
Sp6g28620 Schrenkiella parvula HOM05D010061 ORTHO05D014864 3.6e-94 349.4 395 55.4
Thhalv10015968m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 2.3e-80 303.5 376 51.3
Thhalv10002882m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 1.5e-76 290.8 376 49.7
AL6G26330 Arabidopsis lyrata HOM05D010061 ORTHO05D014864 1.3e-75 287.7 420 45.7
Carub.0006s1364 Capsella rubella HOM05D010061 ORTHO05D014864 5.1e-72 275.8 410 46.8
AT5G15480 Arabidopsis thaliana HOM05D010061 ORTHO05D014864 3.3e-71 273.1 418 44.7
CARHR197830 Cardamine hirsuta HOM05D010061 ORTHO05D014864 6.6e-64 248.8 379 45.4
AT3G01030 Arabidopsis thaliana HOM05D010061 ORTHO05D015940 2.5e-39 167.2 390 39.7
THA.LOC104803130 Tarenaya hassleriana HOM05D010061 ORTHO05D014864 1.5e-36 157.9 368 37.0
AL3G11240 Arabidopsis lyrata HOM05D010061 ORTHO05D015940 5.5e-34 149.4 377 37.9
BcaC01g04459 Brassica carinata HOM05D010061 ORTHO05D015940 3.9e-32 143.3 350 37.1
C03p39850 Brassica napus HOM05D010061 ORTHO05D015940 6.7e-32 142.5 375 35.7
Carub.0003s0115 Capsella rubella HOM05D010061 ORTHO05D015940 1.1e-31 141.7 366 38.8
Thhalv10022306m.g Eutrema salsugineum HOM05D010061 ORTHO05D015940 1.9e-31 141.0 345 37.7
A03p32750 Brassica napus HOM05D010061 ORTHO05D015940 6.3e-30 136.0 376 35.1
BraA03t12444Z Brassica rapa HOM05D010061 ORTHO05D015940 2.4e-29 134.0 376 34.8
BolC3t16248H Brassica oleracea HOM05D010061 ORTHO05D015940 5.3e-29 132.9 377 34.0
Sp3g01110 Schrenkiella parvula HOM05D010061 ORTHO05D015940 9.4e-26 122.1 360 34.2
BcaC01g04493 Brassica carinata HOM05D010061 ORTHO05D015940 3.6e-25 120.2 377 31.3
A02p03060 Brassica napus HOM05D001328 ORTHO05D001459 1.5e-15 88.2 133 42.9
Cpa.g.sc14.159 Carica papaya HOM05D001658 ORTHO05D001406 5.3e-13 79.7 291 29.9
Hma1.2p1_0322F.1_g124870 Hydrangea macrophylla HOM05D001658 ORTHO05D001406 2.0e-12 77.8 423 24.8
MSTRG.7754 Avicennia marina HOM05D001658 ORTHO05D001406 6.5e-11 72.8 386 26.7
THA.LOC104822895 Tarenaya hassleriana HOM05D001658 ORTHO05D001406 8.5e-11 72.4 390 26.2
TPR.G2047 Trifolium pratense HOM05D001658 ORTHO05D001406 8.5e-11 72.4 414 26.3
Manes.01G029200 Manihot esculenta HOM05D001658 ORTHO05D001406 1.5e-10 71.6 378 26.5
Atru.chr11.1665 Acer truncatum HOM05D001658 ORTHO05D001406 1.9e-10 71.2 367 25.6
Actinidia28637 Actinidia chinensis HOM05D001658 ORTHO05D001406 2.5e-10 70.9 344 27.0
CSS0006199 Camellia sinensis var. sinensis HOM05D001658 ORTHO05D001406 3.2e-10 70.5 396 28.0
Potri.010G159600 Populus trichocarpa HOM05D001658 ORTHO05D001406 4.2e-10 70.1 420 25.5
THA.LOC104805032 Tarenaya hassleriana HOM05D001658 ORTHO05D001406 1.2e-09 68.6 389 26.5
Phvul.002G082200 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 2.1e-09 67.8 442 25.3
Oeu016222.2 Olea europaea HOM05D001658 ORTHO05D001406 2.7e-09 67.4 386 24.6
Gohir.D05G306300 Gossypium hirsutum HOM05D001658 ORTHO05D001406 3.6e-09 67.0 354 25.4
Lalb_Chr09g0329031 Lupinus albus HOM05D001658 ORTHO05D001406 3.6e-09 67.0 133 38.3
BcaC05g26407 Brassica carinata HOM05D001658 ORTHO05D001406 4.7e-09 66.6 363 23.4
A07p13010 Brassica napus HOM05D001658 ORTHO05D001406 6.1e-09 66.2 375 24.0
BraA07t29072Z Brassica rapa HOM05D001658 ORTHO05D001406 6.1e-09 66.2 377 25.2
Medtr5g043930 Medicago truncatula HOM05D001658 ORTHO05D001406 8.0e-09 65.9 398 24.6
TAR371G0514 Trochodendron aralioides HOM05D001658 ORTHO05D001406 8.0e-09 65.9 370 25.4
Dinv34085 Davidia involucrata HOM05D001658 ORTHO05D001406 1.0e-08 65.5 372 26.6
Manes.02G053200 Manihot esculenta HOM05D001658 ORTHO05D001406 1.0e-08 65.5 410 25.6
Duzib248G0531 Durio zibethinus HOM05D001658 ORTHO05D001406 1.4e-08 65.1 387 26.1
Gohir.A12G162000 Gossypium hirsutum HOM05D001658 ORTHO05D001406 1.4e-08 65.1 337 26.7
Nitab4.5_0002594g0090 Nicotiana tabacum HOM05D001658 ORTHO05D001406 1.4e-08 65.1 374 26.7
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 1.8e-08 64.7 382 25.4
Gorai.009G326300 Gossypium raimondii HOM05D001658 ORTHO05D001406 1.8e-08 64.7 356 25.6
QL03p071224 Quercus lobata HOM05D001658 ORTHO05D001406 1.8e-08 64.7 362 26.8
unitig_699.g19908 Utricularia gibba HOM05D001658 ORTHO05D001406 2.3e-08 64.3 393 25.4
BcaB03g11999 Brassica carinata HOM05D001658 ORTHO05D001406 3.0e-08 63.9 382 24.9
Oeu038368.1 Olea europaea HOM05D001658 ORTHO05D001406 3.0e-08 63.9 445 26.1
BcaC06g35136 Brassica carinata HOM05D001658 ORTHO05D001406 4.0e-08 63.5 377 26.0
C07p19460 Brassica napus HOM05D001658 ORTHO05D001406 4.0e-08 63.5 377 26.0
BolC7t42465H Brassica oleracea HOM05D001658 ORTHO05D001406 4.0e-08 63.5 377 26.0
Lj2g0006470 Lotus japonicus HOM05D001658 ORTHO05D001406 5.2e-08 63.2 403 25.3
Rhsim12G0135000 Rhododendron simsii HOM05D000773 ORTHO05D000588 5.2e-08 63.2 393 25.4
Medtr4g109340 Medicago truncatula HOM05D001658 ORTHO05D001406 6.7e-08 62.8 360 26.7
SGA_v2.0_scaffold36G14444 Striga asiatica HOM05D001658 ORTHO05D001406 6.7e-08 62.8 383 23.5
Actinidia17578 Actinidia chinensis HOM05D001658 ORTHO05D001406 8.8e-08 62.4 425 26.4
Gohir.A05G306300 Gossypium hirsutum HOM05D001658 ORTHO05D001406 8.8e-08 62.4 356 25.3
AL8G39530 Arabidopsis lyrata HOM05D049262 ORTHO05D080325 1.2e-07 62.0 52 57.7
AL8G39560 Arabidopsis lyrata HOM05D049262 ORTHO05D079777 1.2e-07 62.0 52 57.7
C05p24440 Brassica napus HOM05D001658 ORTHO05D001406 1.2e-07 62.0 389 23.7
BolC5t31177H Brassica oleracea HOM05D001658 ORTHO05D001406 1.2e-07 62.0 388 22.9
BcaC01g01750 Brassica carinata HOM05D001658 ORTHO05D001406 1.5e-07 61.6 341 24.9
C03p72310 Brassica napus HOM05D001658 ORTHO05D001406 1.5e-07 61.6 341 24.9
SalBow8G2697 Salvia bowleyana HOM05D001658 ORTHO05D001406 1.5e-07 61.6 373 26.5
MSTRG.742 Avicennia marina HOM05D001658 ORTHO05D001406 2.6e-07 60.8 380 25.5
Dinv16716 Davidia involucrata HOM05D001658 ORTHO05D001406 2.6e-07 60.8 397 25.9
Lj4g0007457 Lotus japonicus HOM05D001658 ORTHO05D001406 2.6e-07 60.8 431 25.5
CANSAT64G2408 Cannabis sativa HOM05D001658 ORTHO05D001406 3.3e-07 60.5 380 27.6
DCAR_016593 Daucus carota HOM05D001658 ORTHO05D001406 3.3e-07 60.5 400 23.8
Phvul.002G168500 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 3.3e-07 60.5 416 26.4
Carub.0001s2442 Capsella rubella HOM05D001658 ORTHO05D001406 4.4e-07 60.1 379 25.1
Lj4g0014343 Lotus japonicus HOM05D001658 ORTHO05D001406 4.4e-07 60.1 383 24.8
Lalb_Chr05g0220031 Lupinus albus HOM05D001658 ORTHO05D001406 4.4e-07 60.1 355 25.6
BraA09t39498Z Brassica rapa HOM05D001658 ORTHO05D001406 5.7e-07 59.7 399 24.3
Lalb_Chr04g0255741 Lupinus albus HOM05D001658 ORTHO05D001406 5.7e-07 59.7 410 25.1
Lj4C117T2 Lonicera japonica HOM05D001658 ORTHO05D001406 9.7e-07 58.9 421 24.2
Gorai.008G178000 Gossypium raimondii HOM05D001658 ORTHO05D001406 1.3e-06 58.5 354 25.4
Nitab4.5_0002052g0060 Nicotiana tabacum HOM05D001658 ORTHO05D001406 1.3e-06 58.5 395 24.6
Oeu004567.2 Olea europaea HOM05D001658 ORTHO05D001406 1.3e-06 58.5 381 26.2
DCAR_030031 Daucus carota HOM05D001658 ORTHO05D001406 1.7e-06 58.2 396 26.0
Gohir.D12G165300 Gossypium hirsutum HOM05D001658 ORTHO05D001406 1.7e-06 58.2 334 25.4
Oeu062484.1 Olea europaea HOM05D001658 ORTHO05D001406 1.7e-06 58.2 374 27.5
unitig_8.g3455 Utricularia gibba HOM05D001658 ORTHO05D001406 1.7e-06 58.2 353 26.6
CDE09G0755 Ceratophyllum demersum HOM05D001867 ORTHO05D001708 2.8e-06 57.4 138 28.3
BraA02t05276Z Brassica rapa HOM05D001328 ORTHO05D001459 3.7e-06 57.0 48 60.4
Dinv38789 Davidia involucrata HOM05D000773 ORTHO05D000588 3.7e-06 57.0 369 23.3
HanXRQChr12g0379521 Helianthus annuus HOM05D001658 ORTHO05D001406 3.7e-06 57.0 399 24.8
MD00G1156100 Malus domestica HOM05D001658 ORTHO05D001406 3.7e-06 57.0 410 24.6
Nitab4.5_0004511g0050 Nicotiana tabacum HOM05D001658 ORTHO05D001406 3.7e-06 57.0 391 26.6
Thecc.04G092300 Theobroma cacao HOM05D001658 ORTHO05D001406 3.7e-06 57.0 411 25.1
Actinidia07817 Actinidia chinensis HOM05D001658 ORTHO05D001406 4.8e-06 56.6 300 25.0
A08p27420 Brassica napus HOM05D001658 ORTHO05D001406 4.8e-06 56.6 375 25.1
C02p07740 Brassica napus HOM05D001328 ORTHO05D001459 4.8e-06 56.6 48 58.3
BolC2t06705H Brassica oleracea HOM05D001328 ORTHO05D001459 8.2e-06 55.8 121 33.1
Peaxi162Scf00026g00203 Petunia axillaris HOM05D001658 ORTHO05D001406 8.2e-06 55.8 383 25.6


User provided reference genes

Program Settings