Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p06670 Brassica napus HOM05D001661 ORTHO05D039660 1.7e-75 285.8 135 100.0
BcaC04g20367 Brassica carinata HOM05D001661 ORTHO05D039660 9.9e-15 84.0 40 95.0
A08p19180 Brassica napus HOM05D001661 ORTHO05D001575 1.9e-13 79.7 92 51.1
C03p88650 Brassica napus HOM05D001661 ORTHO05D001575 2.4e-13 79.3 92 50.0
BraA08t33879Z Brassica rapa HOM05D001661 ORTHO05D001575 3.2e-13 79.0 92 51.1
Aa31LG2G19960 Aethionema arabicum HOM05D001661 ORTHO05D001575 9.3e-13 77.4 100 45.0
AL7G21590 Arabidopsis lyrata HOM05D001661 ORTHO05D001575 1.6e-12 76.6 92 48.9
Thhalv10000640m.g Eutrema salsugineum HOM05D001661 ORTHO05D001575 2.7e-12 75.9 92 51.1
BcaC01g01147 Brassica carinata HOM05D001661 ORTHO05D001575 3.5e-12 75.5 91 49.5
BolC3t21171H Brassica oleracea HOM05D001661 ORTHO05D001575 3.5e-12 75.5 91 49.5
Thhalv10026083m.g Eutrema salsugineum HOM05D001661 ORTHO05D001575 3.5e-12 75.5 92 48.9
BcaC07g40968 Brassica carinata HOM05D001661 ORTHO05D001575 6.0e-12 74.7 92 48.9
Sp4g02880 Schrenkiella parvula HOM05D001661 ORTHO05D001575 6.0e-12 74.7 92 50.0
A09p56690 Brassica napus HOM05D001661 ORTHO05D001575 7.9e-12 74.3 92 48.9
C08p39660 Brassica napus HOM05D001661 ORTHO05D001575 7.9e-12 74.3 92 48.9
BolC8t51536H Brassica oleracea HOM05D001661 ORTHO05D001575 7.9e-12 74.3 92 48.9
BraA09t41060Z Brassica rapa HOM05D001661 ORTHO05D001575 7.9e-12 74.3 92 48.9
Carub.0007s1002 Capsella rubella HOM05D001661 ORTHO05D001575 1.0e-11 73.9 91 48.4
AT4G30550 Arabidopsis thaliana HOM05D001661 ORTHO05D001575 1.8e-11 73.2 92 47.8
CARHR184670 Cardamine hirsuta HOM05D001661 ORTHO05D001575 3.0e-11 72.4 92 48.9
Aa31LG7G12840 Aethionema arabicum HOM05D001661 ORTHO05D001575 5.1e-11 71.6 92 46.7
AL138U10010 Arabidopsis lyrata HOM05D001661 ORTHO05D001575 6.7e-11 71.2 91 49.5
AL4G14000 Arabidopsis lyrata HOM05D001661 ORTHO05D001575 6.7e-11 71.2 91 49.5
Sp7g28430 Schrenkiella parvula HOM05D001661 ORTHO05D001575 1.1e-10 70.5 92 46.7
AT2G23970 Arabidopsis thaliana HOM05D001661 ORTHO05D001575 1.5e-10 70.1 91 49.5
THA.LOC104803539 Tarenaya hassleriana HOM05D001661 ORTHO05D001575 1.9e-10 69.7 91 47.3
BcaB03g12650 Brassica carinata HOM05D001661 ORTHO05D001575 3.3e-10 68.9 94 47.9
CARHR238430 Cardamine hirsuta HOM05D001661 ORTHO05D001575 5.6e-10 68.2 91 46.2
C03p32720 Brassica napus HOM05D001661 ORTHO05D001575 1.6e-09 66.6 91 46.2
BolC3t15608H Brassica oleracea HOM05D001661 ORTHO05D001575 1.6e-09 66.6 91 46.2
THA.LOC104803921 Tarenaya hassleriana HOM05D001661 ORTHO05D001575 1.6e-09 66.6 91 48.4
Carub.0004s0313 Capsella rubella HOM05D001661 ORTHO05D001575 2.1e-09 66.2 83 47.0
BcaC01g04877 Brassica carinata HOM05D001661 ORTHO05D001575 3.7e-09 65.5 91 46.2
THA.LOC104819995 Tarenaya hassleriana HOM05D001661 ORTHO05D001575 1.1e-08 63.9 91 46.2
THA.LOC104803536 Tarenaya hassleriana HOM05D001661 ORTHO05D001575 1.4e-08 63.5 91 46.2
Carub.0007s1004 Capsella rubella HOM05D001661 ORTHO05D001575 3.1e-08 62.4 91 44.0
THA.LOC104803534 Tarenaya hassleriana HOM05D001661 ORTHO05D001575 5.3e-08 61.6 91 46.2
Sp7g28420 Schrenkiella parvula HOM05D001661 ORTHO05D001575 4.5e-07 58.5 91 42.9
Carub.0007s1003 Capsella rubella HOM05D001661 ORTHO05D001575 1.0e-06 57.4 92 43.5
AT4G30540 Arabidopsis thaliana HOM05D001661 ORTHO05D001575 1.7e-06 56.6 92 43.5
Aa31LG2G19970 Aethionema arabicum HOM05D001661 ORTHO05D001575 2.2e-06 56.2 91 40.7
Thhalv10027000m.g Eutrema salsugineum HOM05D001661 ORTHO05D001575 6.5e-06 54.7 91 39.6
AL7G21600 Arabidopsis lyrata HOM05D001661 ORTHO05D001575 8.4e-06 54.3 92 41.3


User provided reference genes

Program Settings