Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 8.8e-204 713.4 357 100.0
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 1.1e-190 669.8 361 94.2
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 9.5e-190 666.8 361 93.4
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 4.6e-184 647.9 327 99.1
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 1.9e-174 615.9 312 99.0
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 5.1e-167 591.3 312 94.9
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 5.6e-158 561.2 313 88.5
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 1.2e-144 516.9 304 83.9
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 4.6e-144 515.0 320 82.8
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.1e-140 503.8 312 81.4
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 6.9e-140 501.1 318 78.0
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 9.0e-140 500.7 311 78.8
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 1.2e-139 500.4 313 79.9
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 6.9e-124 448.0 312 73.4
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 1.5e-123 446.8 311 70.7
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 3.4e-123 445.7 311 70.4
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 5.9e-123 444.9 316 70.3
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 1.0e-122 444.1 319 68.0
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 6.5e-122 441.4 311 70.4
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 8.5e-122 441.0 317 69.4
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 1.1e-121 440.7 318 68.6
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 5.5e-121 438.3 317 69.1
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 5.5e-121 438.3 327 66.1
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 3.6e-120 435.6 316 69.0
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.5e-118 430.3 305 70.2
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 2.0e-118 429.9 310 70.3
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 2.0e-118 429.9 311 68.2
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 2.6e-118 429.5 310 69.7
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 7.4e-118 427.9 311 69.1
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 1.3e-117 427.2 315 66.0
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 1.3e-117 427.2 301 70.8
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 4.1e-116 422.2 311 67.5
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 9.1e-116 421.0 303 70.0
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 1.5e-115 420.2 315 67.6
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 2.6e-115 419.5 311 67.2
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 4.5e-115 418.7 311 66.9
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 1.0e-114 417.5 319 66.8
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 2.2e-114 416.4 299 70.9
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 2.9e-114 416.0 312 67.0
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 2.9e-114 416.0 317 65.9
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 2.9e-114 416.0 317 66.2
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 2.9e-114 416.0 315 66.0
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 3.8e-114 415.6 307 67.8
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 5.0e-114 415.2 307 67.4
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 6.5e-114 414.8 314 65.6
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 7.2e-113 411.4 327 63.6
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 1.6e-112 410.2 307 66.8
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 2.1e-112 409.8 315 67.9
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 4.7e-112 408.7 353 59.8
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 7.9e-112 407.9 317 65.6
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 7.9e-112 407.9 315 64.8
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 7.9e-112 407.9 316 63.9
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.0e-111 407.5 304 64.5
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 1.4e-111 407.1 309 67.0
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 1.1e-110 404.1 303 66.7
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 1.1e-110 404.1 303 66.7
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.5e-110 403.7 326 62.0
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 1.5e-110 403.7 314 64.6
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 1.5e-110 403.7 317 64.4
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 2.0e-110 403.3 318 65.7
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 2.0e-110 403.3 303 66.7
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 2.6e-110 402.9 317 64.4
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 7.4e-110 401.4 319 62.7
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.7e-109 400.2 323 63.5
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 2.2e-109 399.8 306 66.3
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 2.8e-109 399.4 302 64.6
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 6.3e-109 398.3 302 64.2
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 1.8e-108 396.7 308 65.9
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 4.1e-108 395.6 315 62.5
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 1.2e-107 394.0 296 67.9
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 3.8e-106 389.0 300 66.7
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 7.2e-105 384.8 292 66.8
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 6.7e-103 378.3 311 64.3
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 2.0e-102 376.7 264 71.6
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 2.6e-102 376.3 316 58.9
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 4.4e-102 375.6 310 62.9
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 7.5e-102 374.8 317 62.1
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 7.5e-102 374.8 312 61.2
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 7.5e-102 374.8 300 65.0
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 2.8e-101 372.9 276 67.0
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 1.1e-100 370.9 313 59.7
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 1.4e-100 370.5 313 57.8
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 1.8e-100 370.2 299 60.5
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 2.4e-100 369.8 310 62.3
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 2.7e-99 366.3 314 60.8
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 7.7e-99 364.8 328 55.5
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 2.9e-98 362.8 318 60.1
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 6.5e-98 361.7 309 58.3
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 6.5e-98 361.7 310 61.6
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 3.2e-97 359.4 404 50.0
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 3.6e-96 355.9 310 61.0
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 1.4e-95 354.0 242 71.9
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 9.8e-94 347.8 315 58.1
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.6e-91 340.5 282 63.1
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 4.5e-91 339.0 310 57.7
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 4.2e-89 332.4 312 56.7
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 9.5e-89 331.3 238 69.3
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 2.6e-86 323.2 265 61.1
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.8e-84 317.0 283 60.1
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 6.1e-80 302.0 313 53.7
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.8e-71 273.9 226 64.6
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 4.0e-71 272.7 190 70.0
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 1.2e-48 198.0 303 40.6
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 3.1e-47 193.4 233 49.8
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 2.4e-44 183.7 292 36.0
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 5.4e-44 182.6 302 36.8
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.1e-43 180.6 294 37.4
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 2.3e-42 177.2 301 35.2
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 2.4e-39 167.2 140 59.3
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 4.0e-39 166.4 308 32.5
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 1.0e-34 151.8 234 41.9
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 4.5e-30 136.3 238 39.9
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 1.4e-28 131.3 194 39.7
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 2.1e-24 117.5 137 46.7
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 1.6e-19 101.3 72 62.5
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 3.7e-16 90.1 233 33.0


User provided reference genes

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