Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 6.0e-103 377.5 187 100.0
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 6.0e-103 377.5 187 100.0
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 8.7e-94 347.1 187 93.0
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 5.0e-89 331.3 187 90.4
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 8.4e-89 330.5 188 89.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 5.9e-82 307.8 191 83.2
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 5.0e-81 304.7 192 80.7
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.1e-80 303.5 192 82.8
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 1.9e-80 302.8 190 82.1
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 3.6e-79 298.5 187 81.8
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 2.3e-78 295.8 191 80.1
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 1.1e-77 293.5 192 79.7
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 1.0e-73 280.4 188 77.7
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.5e-61 240.0 193 67.4
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 7.7e-58 227.6 155 69.7
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 6.5e-57 224.6 184 62.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.2e-55 220.3 143 74.8
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 1.2e-55 220.3 172 67.4
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.6e-55 219.9 164 66.5
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 2.7e-55 219.2 173 64.2
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 6.1e-55 218.0 181 61.9
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 8.0e-55 217.6 168 66.1
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.8e-54 216.5 143 73.4
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 2.3e-54 216.1 169 65.7
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 2.3e-54 216.1 144 72.2
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 3.0e-54 215.7 165 65.5
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 4.0e-54 215.3 160 66.2
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 5.2e-54 214.9 181 61.3
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 5.2e-54 214.9 143 72.7
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 5.2e-54 214.9 143 72.7
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 5.2e-54 214.9 143 72.0
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 6.8e-54 214.5 169 62.1
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 8.8e-54 214.2 147 68.0
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.2e-53 213.8 151 71.5
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 1.2e-53 213.8 165 61.8
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 1.2e-53 213.8 144 70.8
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 1.5e-53 213.4 152 69.1
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.5e-53 213.4 179 63.7
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.5e-53 213.4 171 64.3
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 1.5e-53 213.4 130 76.9
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 2.0e-53 213.0 171 65.5
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 2.6e-53 212.6 145 71.0
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 3.4e-53 212.2 191 59.2
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 3.4e-53 212.2 144 72.9
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 3.4e-53 212.2 167 64.1
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 3.4e-53 212.2 118 82.2
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 4.4e-53 211.8 183 60.7
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 7.5e-53 211.1 118 80.5
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 9.8e-53 210.7 128 76.6
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 9.8e-53 210.7 144 72.9
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.7e-52 209.9 132 75.0
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 1.7e-52 209.9 118 80.5
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.2e-52 209.5 192 60.4
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 2.2e-52 209.5 146 68.5
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 2.8e-52 209.1 141 70.9
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 3.7e-52 208.8 150 67.3
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 3.7e-52 208.8 175 61.7
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 3.7e-52 208.8 126 77.0
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 3.7e-52 208.8 147 64.6
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 4.8e-52 208.4 143 71.3
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.1e-51 207.2 119 79.8
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.1e-51 207.2 175 65.1
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.1e-51 207.2 143 69.2
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.4e-51 206.8 138 71.7
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.8e-51 206.5 128 74.2
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 1.8e-51 206.5 175 60.0
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 1.8e-51 206.5 167 60.5
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.4e-51 206.1 187 58.8
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 4.1e-51 205.3 171 62.6
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 4.1e-51 205.3 147 70.1
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 7.0e-51 204.5 144 70.8
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 9.1e-51 204.1 119 79.0
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 9.1e-51 204.1 119 79.8
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.2e-50 203.8 150 66.7
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.2e-50 203.8 146 68.5
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.6e-50 203.4 182 58.8
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 2.0e-50 203.0 189 56.6
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 2.0e-50 203.0 188 58.0
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.7e-50 202.6 118 78.8
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 4.5e-50 201.8 187 55.6
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 5.9e-50 201.4 174 60.9
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 1.0e-49 200.7 175 59.4
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.0e-49 200.7 147 66.7
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 1.3e-49 200.3 147 68.0
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 1.3e-49 200.3 166 60.8
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 1.3e-49 200.3 130 74.6
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.7e-49 199.9 118 76.3
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.2e-49 199.5 156 62.8
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 1.1e-48 197.2 181 56.9
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 5.5e-48 194.9 122 73.0
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 9.4e-48 194.1 119 72.3
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.1e-47 193.0 138 65.9
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 3.4e-45 185.7 136 65.4
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 1.8e-43 179.9 151 57.6
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.4e-43 179.5 138 59.4
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 7.0e-43 177.9 134 63.4
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 9.1e-43 177.6 149 58.4
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 5.9e-42 174.9 121 63.6
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 1.3e-41 173.7 195 50.8
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 1.5e-40 170.2 203 48.8
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 2.5e-40 169.5 150 53.3
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 3.0e-38 162.5 122 63.9
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 5.7e-37 158.3 153 57.5
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 3.2e-35 152.5 121 57.0
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 5.4e-35 151.8 134 57.5
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 1.3e-33 147.1 125 53.6
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 6.6e-33 144.8 134 52.2
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 4.0e-30 135.6 106 72.6
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.2e-23 114.0 96 61.5
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 4.7e-23 112.1 96 60.4
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 8.1e-23 111.3 80 67.5
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 3.1e-22 109.4 77 67.5
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 2.2e-20 103.2 116 47.4
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 1.1e-19 100.9 98 54.1
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 1.9e-19 100.1 134 43.3
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 6.2e-15 85.1 77 57.1
BraA10t44742Z Brassica rapa HOM05D037374 ORTHO05D028018 4.4e-13 79.0 81 65.4


User provided reference genes

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