Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p03790 Brassica napus HOM05D007846 ORTHO05D010837 1.6e-86 323.2 220 100.0
A03p03350 Brassica napus HOM05D007846 ORTHO05D010837 4.5e-73 278.5 156 98.1
BcaB01g06047 Brassica carinata HOM05D007846 ORTHO05D010837 1.0e-69 267.3 201 90.5
BcaB01g05692 Brassica carinata HOM05D007846 ORTHO05D010837 6.5e-48 194.9 148 77.0
BcaB01g06048 Brassica carinata HOM05D007846 ORTHO05D010837 1.1e-39 167.5 94 100.0
BcaB01g06046 Brassica carinata HOM05D007846 ORTHO05D010837 5.4e-34 148.7 279 53.4
BolC3t12914H Brassica oleracea HOM05D007846 ORTHO05D010837 2.7e-33 146.4 285 52.3
BraA03t09686Z Brassica rapa HOM05D007846 ORTHO05D010837 6.1e-30 135.2 274 52.9
A03p03340 Brassica napus HOM05D007846 ORTHO05D010837 1.4e-29 134.0 277 52.3
Sp6g35340 Schrenkiella parvula HOM05D007846 ORTHO05D371621 1.4e-26 124.0 178 52.2
C09p69650 Brassica napus HOM05D007846 ORTHO05D010837 7.3e-23 111.7 119 58.8
BolC9t59708H Brassica oleracea HOM05D007846 ORTHO05D010837 7.3e-23 111.7 119 58.8
BcaC06g32487 Brassica carinata HOM05D007846 ORTHO05D010837 1.6e-22 110.5 98 69.4
BcaC06g32488 Brassica carinata HOM05D021341 ORTHO05D093304 3.0e-21 106.3 142 56.3
Carub.0006s0651 Capsella rubella HOM05D007846 ORTHO05D010837 4.0e-21 105.9 153 47.7
C08p18270 Brassica napus HOM05D007846 ORTHO05D010837 5.2e-21 105.5 100 68.0
AL6G17840 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 6.8e-21 105.1 145 51.0
BolC8t49462H Brassica oleracea HOM05D007846 ORTHO05D010837 1.2e-20 104.4 100 67.0
BraA08t34994Z Brassica rapa HOM05D007846 ORTHO05D010837 1.2e-20 104.4 100 67.0
AT5G07530 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 1.5e-20 104.0 86 67.4
BraA02t04921Z Brassica rapa HOM05D007846 ORTHO05D010837 3.4e-20 102.8 89 66.3
BcaC03g13199 Brassica carinata HOM05D007846 ORTHO05D010837 5.7e-20 102.1 90 64.4
C02p03150 Brassica napus HOM05D007846 ORTHO05D010837 5.7e-20 102.1 90 64.4
BcaC06g32428 Brassica carinata HOM05D007846 ORTHO05D010837 9.8e-20 101.3 100 64.0
BcaC06g32486 Brassica carinata HOM05D007846 ORTHO05D010837 9.8e-20 101.3 86 69.8
C09p69640 Brassica napus HOM05D007846 ORTHO05D010837 9.8e-20 101.3 100 64.0
BolC2t06277H Brassica oleracea HOM05D007846 ORTHO05D010837 9.8e-20 101.3 89 65.2
BolC9t59707H Brassica oleracea HOM05D007846 ORTHO05D010837 9.8e-20 101.3 100 64.0
A10p29250 Brassica napus HOM05D007846 ORTHO05D010837 2.2e-19 100.1 100 64.0
BraA10t44971Z Brassica rapa HOM05D007846 ORTHO05D010837 2.2e-19 100.1 100 64.0
CARHR205620 Cardamine hirsuta HOM05D007846 ORTHO05D010837 4.9e-19 99.0 98 59.2
Thhalv10013795m.g Eutrema salsugineum HOM05D007846 ORTHO05D195878 6.4e-19 98.6 173 45.1
Sp6g35330 Schrenkiella parvula HOM05D007846 ORTHO05D021761 1.8e-18 97.1 111 52.3
C02p03180 Brassica napus HOM05D007846 ORTHO05D010837 2.4e-18 96.7 111 57.7
BolC2t06280H Brassica oleracea HOM05D007846 ORTHO05D010837 2.4e-18 96.7 111 57.7
BcaB05g21610 Brassica carinata HOM05D007846 ORTHO05D010837 3.2e-18 96.3 109 56.0
Carub.0006s0650 Capsella rubella HOM05D007846 ORTHO05D010837 9.2e-18 94.7 101 58.4
BcaC03g13197 Brassica carinata HOM05D007846 ORTHO05D010837 2.7e-17 93.2 110 57.3
AL6G17910 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 7.8e-17 91.7 99 60.6
AT5G07540 Arabidopsis thaliana HOM05D007846 ORTHO05D031404 3.0e-16 89.7 87 58.6
AL6G17850 Arabidopsis lyrata HOM05D007846 ORTHO05D031404 3.9e-16 89.4 87 58.6
BraA02t04922Z Brassica rapa HOM05D007846 ORTHO05D010837 3.9e-16 89.4 111 55.9
Carub.0006s0658 Capsella rubella HOM05D007846 ORTHO05D010837 5.0e-16 89.0 83 62.7
AL6G17830 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 8.6e-16 88.2 110 51.8
AT5G07600 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 1.5e-15 87.4 114 52.6
Sp6g35350 Schrenkiella parvula HOM05D007846 ORTHO05D010837 5.6e-15 85.5 126 49.2
AT5G07520 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 1.2e-14 84.3 111 51.4
A10p29260 Brassica napus HOM05D007846 ORTHO05D010837 3.6e-14 82.8 165 40.0
BraA10t44972Z Brassica rapa HOM05D007846 ORTHO05D010837 3.6e-14 82.8 165 40.0
Thhalv10014560m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 4.7e-14 82.4 104 51.9
C09p69670 Brassica napus HOM05D007846 ORTHO05D021761 1.8e-13 80.5 111 46.8
BolC9t59710H Brassica oleracea HOM05D007846 ORTHO05D021761 1.8e-13 80.5 111 46.8
AT5G07510 Arabidopsis thaliana HOM05D007846 ORTHO05D038626 3.1e-13 79.7 91 57.1
Thhalv10014587m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 6.8e-13 78.6 80 58.8
Thhalv10015090m.g Eutrema salsugineum HOM05D007846 ORTHO05D000624 1.2e-12 77.8 95 52.6
BcaC06g32424 Brassica carinata HOM05D007846 ORTHO05D021761 2.6e-12 76.6 102 48.0
BcaC06g32425 Brassica carinata HOM05D021341 ORTHO05D024077 4.4e-12 75.9 138 45.7
C09p69660 Brassica napus HOM05D021341 ORTHO05D024077 4.4e-12 75.9 138 45.7
BolC9t59709H Brassica oleracea HOM05D021341 ORTHO05D024077 4.4e-12 75.9 138 45.7
Aa31LG3G18890 Aethionema arabicum HOM05D007846 ORTHO05D010837 5.8e-12 75.5 116 42.2
CARHR205610 Cardamine hirsuta HOM05D007846 ORTHO05D000624 5.8e-12 75.5 94 48.9
A10p29300 Brassica napus HOM05D007846 ORTHO05D021761 7.5e-12 75.1 111 45.9
BraA10t44974Z Brassica rapa HOM05D007846 ORTHO05D021761 7.5e-12 75.1 111 45.9
A10p29270 Brassica napus HOM05D021341 ORTHO05D024077 9.8e-12 74.7 141 46.1
BraA10t44973Z Brassica rapa HOM05D021341 ORTHO05D024077 9.8e-12 74.7 141 46.1
Thhalv10015089m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 9.8e-12 74.7 102 50.0
AL6G17810 Arabidopsis lyrata HOM05D007846 ORTHO05D038626 2.2e-11 73.6 90 53.3
BcaC06g32490 Brassica carinata HOM05D007846 ORTHO05D000624 6.4e-11 72.0 86 50.0
Carub.0006s0653 Capsella rubella HOM05D007846 ORTHO05D000624 6.4e-11 72.0 94 45.7
Sp6g35320 Schrenkiella parvula HOM05D000805 ORTHO05D000624 6.4e-11 72.0 99 49.5
A10p29310 Brassica napus HOM05D007846 ORTHO05D023961 1.4e-10 70.9 83 50.6
BraA10t44975Z Brassica rapa HOM05D007846 ORTHO05D023961 1.4e-10 70.9 83 50.6
BcaC06g32423 Brassica carinata HOM05D007846 ORTHO05D023961 2.4e-10 70.1 83 50.6
C09p69680 Brassica napus HOM05D007846 ORTHO05D023961 2.4e-10 70.1 83 50.6
BolC9t59711H Brassica oleracea HOM05D007846 ORTHO05D023961 2.4e-10 70.1 83 50.6
Sp6g35310 Schrenkiella parvula HOM05D007846 ORTHO05D000624 2.4e-10 70.1 95 46.3
AL6G17860 Arabidopsis lyrata HOM05D007846 ORTHO05D000624 7.0e-10 68.6 104 44.2
Aa31LG3G18860 Aethionema arabicum HOM05D007846 ORTHO05D000624 3.5e-09 66.2 78 46.2
Carub.0006s0652 Capsella rubella HOM05D007846 ORTHO05D031404 4.6e-09 65.9 87 47.1
AT5G07550 Arabidopsis thaliana HOM05D007846 ORTHO05D000624 6.0e-09 65.5 94 43.6
BcaB01g06049 Brassica carinata HOM05D007846 ORTHO05D000624 7.8e-09 65.1 79 50.6
BolC3t12915H Brassica oleracea HOM05D000805 ORTHO05D000624 7.8e-09 65.1 79 50.6
C03p03800 Brassica napus HOM05D000805 ORTHO05D000624 1.0e-08 64.7 79 50.6
AT5G07560 Arabidopsis thaliana HOM05D007846 ORTHO05D012592 1.7e-08 63.9 90 46.7
A03p03360 Brassica napus HOM05D000805 ORTHO05D000624 1.1e-07 61.2 79 48.1
BraA03t09687Z Brassica rapa HOM05D000805 ORTHO05D000624 1.1e-07 61.2 79 48.1
AL6G17870 Arabidopsis lyrata HOM05D007846 ORTHO05D012592 2.5e-07 60.1 91 44.0
BraA02t04924Z Brassica rapa HOM05D007846 ORTHO05D012592 4.3e-07 59.3 82 47.6
BcaB05g21609 Brassica carinata HOM05D000805 ORTHO05D012592 7.3e-07 58.5 82 47.6
CARHR205580 Cardamine hirsuta HOM05D007846 ORTHO05D012592 7.3e-07 58.5 71 50.7
CARHR205600 Cardamine hirsuta HOM05D007846 ORTHO05D012592 7.3e-07 58.5 95 41.1
Thhalv10014500m.g Eutrema salsugineum HOM05D000805 ORTHO05D012592 9.5e-07 58.2 91 41.8
C02p03200 Brassica napus HOM05D007846 ORTHO05D012592 1.2e-06 57.8 82 46.3
BolC2t06282H Brassica oleracea HOM05D007846 ORTHO05D012592 1.2e-06 57.8 82 46.3
C02p03190 Brassica napus HOM05D000805 ORTHO05D012592 1.6e-06 57.4 106 41.5
BolC2t06281H Brassica oleracea HOM05D000805 ORTHO05D012592 1.6e-06 57.4 106 41.5
Thhalv10015579m.g Eutrema salsugineum HOM05D000805 ORTHO05D196068 2.8e-06 56.6 82 45.1
Sp6g35300 Schrenkiella parvula HOM05D000805 ORTHO05D012592 8.1e-06 55.1 91 39.6


User provided reference genes

Program Settings