Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p03040 Brassica napus HOM05D008937 ORTHO05D018655 1.9e-111 406.0 219 100.0
C09p36130 Brassica napus HOM05D000096 ORTHO05D018655 3.3e-84 315.5 235 78.3
BcaC04g21060 Brassica carinata HOM05D008937 ORTHO05D018655 1.1e-82 310.5 276 68.1
A02p09270 Brassica napus HOM05D000096 ORTHO05D000045 4.2e-71 271.9 235 70.6
C05p38060 Brassica napus HOM05D008937 ORTHO05D018655 7.4e-68 261.2 193 74.6
C07p14860 Brassica napus HOM05D008937 ORTHO05D018655 4.8e-43 178.7 90 97.8
BraA04t16689Z Brassica rapa HOM05D008937 ORTHO05D040956 2.6e-41 172.9 184 59.2
BolC9t56452H Brassica oleracea HOM05D000096 ORTHO05D000045 5.5e-39 165.2 160 68.1
C02p58080 Brassica napus HOM05D000096 ORTHO05D000045 9.4e-39 164.5 118 76.3
BolC9t54268H Brassica oleracea HOM05D000096 ORTHO05D018655 1.4e-37 160.6 160 61.2
A03p66740 Brassica napus HOM05D008937 ORTHO05D018655 2.3e-37 159.8 220 46.8
BraA01t02807Z Brassica rapa HOM05D008937 ORTHO05D018655 2.3e-37 159.8 220 46.8
A04p10220 Brassica napus HOM05D008937 ORTHO05D040956 6.1e-30 135.2 124 65.3
C02p07150 Brassica napus HOM05D001482 ORTHO05D001499 5.0e-24 115.5 160 50.0
C09p57380 Brassica napus HOM05D001407 ORTHO05D001314 5.9e-17 92.0 219 35.6
BcaB03g16822 Brassica carinata HOM05D008937 ORTHO05D014946 1.3e-16 90.9 204 39.7
A06p18360 Brassica napus HOM05D008937 ORTHO05D000045 8.5e-16 88.2 182 38.5
BraA02t07815Z Brassica rapa HOM05D000096 ORTHO05D014946 1.9e-15 87.0 149 41.6
BcaC09g52226 Brassica carinata HOM05D008937 ORTHO05D032959 3.6e-14 82.8 172 41.3
BolC1t04274H Brassica oleracea HOM05D008937 ORTHO05D014946 8.0e-14 81.6 185 38.9
BcaC07g40034 Brassica carinata HOM05D008937 ORTHO05D039228 1.4e-13 80.9 214 35.0
A02p27730 Brassica napus HOM05D002315 ORTHO05D002416 1.2e-12 77.8 103 47.6
C01p41140 Brassica napus HOM05D008937 ORTHO05D014946 3.4e-12 76.3 112 46.4
BolC1t04069H Brassica oleracea HOM05D008937 ORTHO05D014946 3.4e-12 76.3 112 46.4
BraA05t20999Z Brassica rapa HOM05D008937 ORTHO05D014946 7.5e-12 75.1 118 42.4
A05p20930 Brassica napus HOM05D008937 ORTHO05D014946 9.8e-12 74.7 89 50.6
BcaC05g25261 Brassica carinata HOM05D008937 ORTHO05D014946 2.2e-11 73.6 187 35.3
A09p64020 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-11 73.6 97 48.5
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-11 73.2 90 50.0
C01p09670 Brassica napus HOM05D000096 ORTHO05D032959 4.9e-11 72.4 169 39.1
C08p32540 Brassica napus HOM05D008937 ORTHO05D039228 1.1e-10 71.2 234 31.6
BcaB04g18071 Brassica carinata HOM05D008937 ORTHO05D014946 9.2e-10 68.2 181 34.8
A09p33110 Brassica napus HOM05D008937 ORTHO05D014946 9.2e-10 68.2 165 36.4
BraA09t38855Z Brassica rapa HOM05D008937 ORTHO05D014946 9.2e-10 68.2 165 36.4
BcaC05g28065 Brassica carinata HOM05D008937 ORTHO05D021603 5.9e-09 65.5 172 33.7
BolC1t03182H Brassica oleracea HOM05D008937 ORTHO05D014946 7.8e-09 65.1 144 38.2
BraA05t21675Z Brassica rapa HOM05D000096 ORTHO05D000045 1.7e-08 63.9 160 33.8
C05p40790 Brassica napus HOM05D008937 ORTHO05D021603 2.3e-08 63.5 161 34.2
BolC9t53769H Brassica oleracea HOM05D008937 ORTHO05D021603 3.8e-08 62.8 161 34.2
BolC9t54201H Brassica oleracea HOM05D008937 ORTHO05D021603 3.8e-08 62.8 161 34.2
C01p31890 Brassica napus HOM05D008937 ORTHO05D021603 5.0e-08 62.4 161 34.2
BolC4t25737H Brassica oleracea HOM05D008937 ORTHO05D021603 8.6e-08 61.6 161 33.5
C01p32440 Brassica napus HOM05D008937 ORTHO05D014946 3.6e-06 56.2 98 42.9


User provided reference genes

Program Settings