Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p00680 Brassica napus HOM05D010528 ORTHO05D005174 9.5e-56 219.9 111 100.0
A03p00720 Brassica napus HOM05D010528 ORTHO05D005174 9.5e-56 219.9 111 100.0
C03p00950 Brassica napus HOM05D010528 ORTHO05D005174 9.5e-56 219.9 111 100.0
BolC3t12657H Brassica oleracea HOM05D010528 ORTHO05D005174 9.5e-56 219.9 111 100.0
BraA03t09457Z Brassica rapa HOM05D010528 ORTHO05D005174 9.5e-56 219.9 111 100.0
BcaB01g06161 Brassica carinata HOM05D010528 ORTHO05D005174 4.0e-54 214.5 111 98.2
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 1.0e-41 173.3 116 80.2
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 3.9e-41 171.4 114 77.2
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 6.6e-41 170.6 116 80.2
Thhalv10015059m.g Eutrema salsugineum HOM05D010528 ORTHO05D005174 8.7e-41 170.2 114 77.2
BcaNung05923 Brassica carinata HOM05D010528 ORTHO05D005174 3.3e-40 168.3 107 79.4
Sp7g08770 Schrenkiella parvula HOM05D010528 ORTHO05D005174 9.6e-40 166.8 114 77.2
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 1.2e-37 159.8 115 77.4
C09p74150 Brassica napus HOM05D010528 ORTHO05D005174 2.4e-35 152.1 115 73.9
BolC9t60147H Brassica oleracea HOM05D010528 ORTHO05D005174 2.4e-35 152.1 115 73.9
A10p33240 Brassica napus HOM05D010528 ORTHO05D005174 5.1e-33 144.4 115 71.3
BraA10t45352Z Brassica rapa HOM05D010528 ORTHO05D005174 5.1e-33 144.4 115 71.3
BcaC06g31989 Brassica carinata HOM05D010528 ORTHO05D005174 6.4e-28 127.5 112 64.3
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 1.6e-23 112.8 114 61.4
THA.LOC104823258 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 6.9e-22 107.5 115 55.7
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 7.1e-19 97.4 116 55.2
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 8.8e-09 63.9 117 35.0
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 4.8e-07 58.2 107 39.3
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 1.1e-06 57.0 67 50.7
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-06 57.0 105 40.0
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.8e-06 56.2 78 43.6
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.8e-06 56.2 76 44.7
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.4e-06 55.8 82 41.5
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.1e-06 55.5 82 50.0
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.1e-06 55.5 83 49.4
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 3.1e-06 55.5 92 45.7
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.1e-06 55.1 81 51.9
Gorai.006G173200 Gossypium raimondii HOM05D036294 ORTHO05D036268 4.1e-06 55.1 76 44.7
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 4.1e-06 55.1 83 44.6
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 4.1e-06 55.1 70 47.1
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 5.3e-06 54.7 84 47.6
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 6.9e-06 54.3 77 48.1
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 6.9e-06 54.3 75 48.0
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 9.1e-06 53.9 108 42.6
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 9.1e-06 53.9 113 38.9


User provided reference genes

Program Settings