Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 1.4e-188 662.9 370 100.0
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 2.3e-170 602.4 364 94.2
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 2.3e-170 602.4 364 94.2
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 4.4e-166 588.2 353 95.2
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.7e-165 586.3 342 97.1
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 1.3e-146 523.5 314 94.9
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 1.4e-140 503.4 307 94.5
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 7.4e-129 464.5 278 92.1
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 7.4e-129 464.5 278 92.1
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.7e-128 463.4 290 93.1
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 8.8e-114 414.5 241 91.7
BcaB08g34407 Brassica carinata HOM05D010239 ORTHO05D032921 7.0e-111 404.8 245 95.5
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 7.3e-68 261.9 180 78.3
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 1.6e-67 260.8 196 73.5
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 2.4e-63 246.9 173 77.5
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 7.8e-62 241.9 240 61.7
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 7.6e-57 225.3 180 71.7
BcaB01g01520 Brassica carinata HOM05D010239 ORTHO05D090601 2.4e-50 203.8 215 61.4
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 2.0e-49 200.7 173 67.6
BolC9t58576H Brassica oleracea HOM05D010239 ORTHO05D106135 1.3e-45 188.0 125 96.8
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 1.1e-36 158.3 102 80.4
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 6.9e-18 95.9 132 47.7
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 3.4e-17 93.6 133 42.9
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 1.0e-16 92.0 133 42.9
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 5.0e-16 89.7 122 45.1
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 5.0e-16 89.7 122 45.1
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 5.0e-16 89.7 122 45.1
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 2.5e-15 87.4 218 36.2
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 3.2e-15 87.0 218 36.2
BcaB01g03011 Brassica carinata HOM05D010239 ORTHO05D095759 4.2e-15 86.7 86 60.5
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 4.2e-15 86.7 160 40.6
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 4.2e-15 86.7 160 40.6
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.6e-14 84.7 99 50.5
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.6e-14 84.7 199 37.2
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 2.1e-14 84.3 99 48.5
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 2.7e-14 84.0 100 46.0
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 2.7e-14 84.0 99 51.5
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 3.6e-14 83.6 99 51.5
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 3.6e-14 83.6 99 48.5
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 4.6e-14 83.2 99 47.5
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 4.6e-14 83.2 99 50.5
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 1.8e-13 81.3 141 41.1
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 2.3e-13 80.9 106 44.3
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.3e-13 80.9 99 50.5
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 8.8e-13 79.0 112 43.8
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 1.5e-12 78.2 152 39.5
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 1.5e-12 78.2 155 40.6
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 3.3e-12 77.0 154 39.0
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 3.3e-12 77.0 154 39.0
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 4.3e-12 76.6 126 41.3
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 5.7e-12 76.3 86 50.0
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 7.4e-12 75.9 99 44.4
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 9.7e-12 75.5 99 44.4
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 1.3e-11 75.1 152 36.2
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 8.2e-11 72.4 78 50.0
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 2.4e-10 70.9 84 46.4
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 6.9e-10 69.3 87 51.7
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 9.1e-10 68.9 98 43.9
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 9.1e-10 68.9 79 48.1
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 3.4e-09 67.0 79 54.4
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 5.9e-09 66.2 115 42.6
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 1.0e-08 65.5 70 60.0
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 1.3e-08 65.1 74 50.0
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 3.8e-08 63.5 74 51.4
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 3.8e-08 63.5 129 38.8
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 3.8e-08 63.5 68 54.4
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 3.8e-08 63.5 68 54.4
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 5.0e-08 63.2 121 38.8
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 5.5e-07 59.7 110 39.1
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 9.4e-07 58.9 59 55.9
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 3.6e-06 57.0 116 38.8


User provided reference genes

Program Settings