Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p64910 Brassica napus HOM05D000669 ORTHO05D042240 6.9e-43 176.8 83 100.0
BolC2t12550H Brassica oleracea HOM05D000669 ORTHO05D042240 5.0e-41 170.6 83 96.4
AT5G66530 Arabidopsis thaliana HOM05D000669 ORTHO05D008810 2.3e-22 108.6 74 75.7
AL8G45000 Arabidopsis lyrata HOM05D000669 ORTHO05D008810 8.8e-22 106.7 74 74.3
Carub.0008s2800 Capsella rubella HOM05D000669 ORTHO05D008810 8.8e-22 106.7 72 75.0
Sp2g30200 Schrenkiella parvula HOM05D000669 ORTHO05D008810 1.1e-21 106.3 74 74.3
BcaB02g10020 Brassica carinata HOM05D000669 ORTHO05D008810 3.3e-21 104.8 74 73.0
BcaC06g34712 Brassica carinata HOM05D000669 ORTHO05D008810 3.3e-21 104.8 74 73.0
C07p25380 Brassica napus HOM05D000669 ORTHO05D008810 3.3e-21 104.8 74 73.0
BolC7t43060H Brassica oleracea HOM05D000669 ORTHO05D008810 3.3e-21 104.8 74 73.0
CARHR281220 Cardamine hirsuta HOM05D000669 ORTHO05D008810 5.7e-21 104.0 74 73.0
Aa31LG1G15050 Aethionema arabicum HOM05D000669 ORTHO05D008810 9.7e-21 103.2 74 71.6
A07p17450 Brassica napus HOM05D000669 ORTHO05D008810 9.7e-21 103.2 74 71.6
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 9.7e-21 103.2 74 71.6
Thhalv10004652m.g Eutrema salsugineum HOM05D000669 ORTHO05D008810 9.7e-21 103.2 74 70.3
THA.LOC104821286 Tarenaya hassleriana HOM05D000669 ORTHO05D008810 1.2e-18 96.3 74 66.2
CANSAT01G1107 Cannabis sativa HOM05D000669 ORTHO05D008810 5.0e-17 90.9 75 61.3
BcaNung06645 Brassica carinata HOM05D000669 ORTHO05D008810 1.5e-16 89.4 74 66.2
CiPaw.02G019200 Carya illinoinensis HOM05D000669 ORTHO05D008810 1.5e-16 89.4 75 61.3
Ca_24861_v3 Cicer arietinum L. HOM05D000669 ORTHO05D008810 4.7e-15 84.3 75 60.0
Lj2g0023842 Lotus japonicus HOM05D000669 ORTHO05D008810 4.7e-15 84.3 75 60.0
MD02G1144900 Malus domestica HOM05D000669 ORTHO05D008810 4.7e-15 84.3 75 58.7
Cfa004329 Carpinus fangiana HOM05D000669 ORTHO05D008810 6.1e-15 84.0 75 58.7
Oeu023817.2 Olea europaea HOM05D000669 ORTHO05D008810 6.1e-15 84.0 74 56.8
Hund13988 Selenicereus undatus HOM05D000669 ORTHO05D008810 6.1e-15 84.0 74 58.1
Dinv13511 Davidia involucrata HOM05D000669 ORTHO05D008810 8.0e-15 83.6 75 60.0
Aqoxy5G01595 Aquilegia oxysepala HOM05D000669 ORTHO05D008810 1.0e-14 83.2 75 58.7
DCAR_017300 Daucus carota HOM05D000669 ORTHO05D008810 1.0e-14 83.2 73 57.5
Potri.007G023200 Populus trichocarpa HOM05D000669 ORTHO05D008810 1.0e-14 83.2 75 58.7
Prupe.7G156700 Prunus persica HOM05D000669 ORTHO05D008810 1.0e-14 83.2 75 57.3
Cpa.g.sc6.134 Carica papaya HOM05D000669 ORTHO05D008810 1.4e-14 82.8 73 57.5
AUR62004068 Chenopodium quinoa HOM05D000669 ORTHO05D008810 1.4e-14 82.8 75 53.3
TPR.G2379 Trifolium pratense HOM05D000669 ORTHO05D008810 1.4e-14 82.8 75 58.7
TAR376G0664 Trochodendron aralioides HOM05D000669 ORTHO05D008810 1.4e-14 82.8 75 57.3
Gohir.A11G183300 Gossypium hirsutum HOM05D000669 ORTHO05D008810 1.8e-14 82.4 75 57.3
Gohir.D11G189800 Gossypium hirsutum HOM05D000669 ORTHO05D008810 1.8e-14 82.4 75 57.3
MBI16_g07733_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D008810 2.3e-14 82.0 75 56.0
Psat2g158440 Pisum sativum HOM05D000669 ORTHO05D008810 2.3e-14 82.0 75 57.3
PGR102G2455 Punica granatum HOM05D000669 ORTHO05D008810 2.3e-14 82.0 75 56.0
RcHm_v2.0_Chr2g0101191 Rosa chinensis HOM05D000669 ORTHO05D008810 2.3e-14 82.0 75 57.3
Lj4A203G40 Lonicera japonica HOM05D000669 ORTHO05D008810 3.0e-14 81.6 74 58.1
PSO210G6873 Papaver somniferum HOM05D000669 ORTHO05D008810 4.0e-14 81.3 75 57.3
PSO238G0021 Papaver somniferum HOM05D000669 ORTHO05D008810 4.0e-14 81.3 75 57.3
QL06p046584 Quercus lobata HOM05D000669 ORTHO05D008810 4.0e-14 81.3 72 58.3
Sabra07G0020200 Salix brachista HOM05D000669 ORTHO05D008810 5.2e-14 80.9 75 56.0
ATR0568G044 Amborella trichopoda HOM05D000669 ORTHO05D008810 6.8e-14 80.5 74 52.7
ClCG07G008390 Citrullus lanatus HOM05D000669 ORTHO05D008810 6.8e-14 80.5 74 56.8
Duzib147G0643 Durio zibethinus HOM05D000669 ORTHO05D008810 6.8e-14 80.5 75 57.3
FvH4_1g13030 Fragaria vesca HOM05D000669 ORTHO05D008810 6.8e-14 80.5 75 56.0
Sed0011076 Sechium edule HOM05D000669 ORTHO05D008810 6.8e-14 80.5 74 56.8
EL10Ac6g15545 Beta vulgaris HOM05D000669 ORTHO05D008810 8.8e-14 80.1 74 55.4
MELO3C016374.2 Cucumis melo HOM05D000669 ORTHO05D008810 8.8e-14 80.1 74 56.8
CsaV3_4G005770 Cucumis sativus L. HOM05D000669 ORTHO05D008810 8.8e-14 80.1 74 56.8
Glyma.01G173300 Glycine max HOM05D000669 ORTHO05D008810 8.8e-14 80.1 75 57.3
unitig_744.g23974 Utricularia gibba HOM05D000669 ORTHO05D008810 1.2e-13 79.7 75 54.7
FAN19G3134 Fragaria x ananassa HOM05D000669 ORTHO05D008810 1.5e-13 79.3 75 56.0
FAN26G1638 Fragaria x ananassa HOM05D000669 ORTHO05D008810 1.5e-13 79.3 75 54.7
Gorai.007G202000 Gossypium raimondii HOM05D000669 ORTHO05D008810 1.5e-13 79.3 75 56.0
Medtr5g020640 Medicago truncatula HOM05D000669 ORTHO05D008810 1.5e-13 79.3 75 56.0
SEGI_29161 Sequoiadendron giganteum HOM05D000669 ORTHO05D008810 1.5e-13 79.3 75 54.7
Ciclev10026121m.g Citrus clementina HOM05D000669 ORTHO05D008810 2.0e-13 79.0 75 56.0
Rhsim02G0136400 Rhododendron simsii HOM05D000669 ORTHO05D008810 2.0e-13 79.0 73 54.8
arahy.Tifrunner.gnm1.ann1.CQ7HGG Arachis hypogaea HOM05D000669 ORTHO05D008810 2.6e-13 78.6 75 56.0
CSS0007504 Camellia sinensis var. sinensis HOM05D000669 ORTHO05D008810 2.6e-13 78.6 74 55.4
Nitab4.5_0006115g0030 Nicotiana tabacum HOM05D000669 ORTHO05D008810 2.6e-13 78.6 75 54.7
VMungo1215G2722 Vigna mungo HOM05D000669 ORTHO05D008810 2.6e-13 78.6 75 56.0
GSVIVG01018938001 Vitis vinifera HOM05D000669 ORTHO05D008810 2.6e-13 78.6 75 56.0
Nitab4.5_0000178g0210 Nicotiana tabacum HOM05D000669 ORTHO05D008810 3.4e-13 78.2 74 55.4
Phvul.002G031900 Phaseolus vulgaris HOM05D000669 ORTHO05D008810 3.4e-13 78.2 75 56.0
Sopen02g029790 Solanum pennellii HOM05D000669 ORTHO05D008810 3.4e-13 78.2 74 55.4
CDE06G0095 Ceratophyllum demersum HOM05D000669 ORTHO05D008810 4.4e-13 77.8 74 56.8
Eucgr.H03316 Eucalyptus grandis HOM05D000669 ORTHO05D008810 4.4e-13 77.8 74 54.1
Manes.02G095500 Manihot esculenta HOM05D000669 ORTHO05D008810 4.4e-13 77.8 75 54.7
SGA_v2.0_scaffold54G19548 Striga asiatica HOM05D000669 ORTHO05D008810 4.4e-13 77.8 75 53.3
Actinidia16033 Actinidia chinensis HOM05D000669 ORTHO05D008810 5.7e-13 77.4 75 53.3
Cc07_g09700 Coffea canephora HOM05D000669 ORTHO05D008810 5.7e-13 77.4 74 54.1
TWI73G1074 Tripterygium wilfordii HOM05D000669 ORTHO05D008810 5.7e-13 77.4 73 54.8
AUR62007581 Chenopodium quinoa HOM05D000669 ORTHO05D008810 7.5e-13 77.0 75 53.3
Peaxi162Scf00366g00530 Petunia axillaris HOM05D000669 ORTHO05D008810 7.5e-13 77.0 74 52.7
Thecc.01G033100 Theobroma cacao HOM05D000669 ORTHO05D008810 7.5e-13 77.0 75 56.0
CAN.G358.65 Capsicum annuum HOM05D000669 ORTHO05D008810 9.8e-13 76.6 75 53.3
FAN23G2804 Fragaria x ananassa HOM05D000669 ORTHO05D008810 9.8e-13 76.6 75 53.3
ECA246G3451 Erigeron canadensis HOM05D000669 ORTHO05D008810 1.3e-12 76.3 75 54.7
Solyc02g085100.3 Solanum lycopersicum HOM05D000669 ORTHO05D008810 1.3e-12 76.3 74 54.1
PGSC0003DMG400003513 Solanum tuberosum HOM05D000669 ORTHO05D008810 1.3e-12 76.3 74 54.1
MSTRG.23512 Avicennia marina HOM05D000669 ORTHO05D008810 2.2e-12 75.5 74 54.1
Nn1g04946 Nelumbo nucifera HOM05D000669 ORTHO05D008810 2.8e-12 75.1 74 55.4
Atru.chr3.603 Acer truncatum HOM05D000669 ORTHO05D008810 3.7e-12 74.7 75 52.0
Migut.H00964 Erythranthe guttata HOM05D000669 ORTHO05D008810 4.8e-12 74.3 75 49.3
HanXRQChr16g0530621 Helianthus annuus HOM05D000669 ORTHO05D008810 6.3e-12 73.9 75 53.3
Lsat_1_v5_gn_3_76061 Lactuca sativa HOM05D000669 ORTHO05D008810 6.3e-12 73.9 75 53.3
SalBow5G4165 Salvia bowleyana HOM05D000669 ORTHO05D008810 1.1e-11 73.2 70 52.9
SalBow1G4043 Salvia bowleyana HOM05D000669 ORTHO05D008810 1.4e-11 72.8 73 50.7
FAN28G0240 Fragaria x ananassa HOM05D000669 ORTHO05D008810 2.4e-11 72.0 83 50.6
Zm00001eb309980 Zea mays HOM05D000669 ORTHO05D008810 3.1e-11 71.6 73 52.1
Lalb_Chr05g0212731 Lupinus albus HOM05D000669 ORTHO05D008810 7.0e-11 70.5 75 52.0
Pp3c7_27000 Physcomitrium patens HOM05D000669 ORTHO05D008810 9.1e-11 70.1 73 47.9
Os09g0327400 Oryza sativa ssp. japonica HOM05D000669 ORTHO05D008810 1.2e-10 69.7 72 48.6
HPP92_024326 Vanilla planifolia HOM05D000669 ORTHO05D008810 1.0e-09 66.6 74 48.6
AagrBONN_evm.TU.Sc2ySwM_344.2308 Anthoceros agrestis HOM05D001758 ORTHO05D005969 1.3e-09 66.2 74 48.6
COL.COLO4_22052 Corchorus olitorius HOM05D000669 ORTHO05D008810 7.2e-08 60.5 52 63.5
MD15G1259100 Malus domestica HOM05D000669 ORTHO05D008810 9.4e-08 60.1 42 64.3
Ah.02g125100 Amaranthus hybridus HOM05D000669 ORTHO05D008810 1.2e-07 59.7 107 37.4
vmacro11087 Vaccinium macrocarpon HOM05D000669 ORTHO05D008810 2.1e-07 58.9 53 56.6
CBR_g22002 Chara braunii HOM05D000669 ORTHO05D008810 4.7e-07 57.8 73 45.2
Pp3c2_28550 Physcomitrium patens HOM05D000669 ORTHO05D008810 8.0e-07 57.0 71 39.4


User provided reference genes

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