Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p64860 Brassica napus HOM05D000626 ORTHO05D003868 1.2e-35 152.5 71 100.0
BcaC03g18407 Brassica carinata HOM05D000626 ORTHO05D003868 7.3e-33 143.3 68 97.1
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 3.4e-22 107.8 53 92.5
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 3.4e-22 107.8 53 92.5
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 5.8e-22 107.1 53 90.6
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 7.5e-22 106.7 53 90.6
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 9.8e-22 106.3 53 90.6
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 9.8e-22 106.3 53 90.6
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 9.8e-22 106.3 53 90.6
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 9.8e-22 106.3 53 90.6
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 9.8e-22 106.3 53 90.6
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 9.8e-22 106.3 53 90.6
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 9.8e-22 106.3 53 90.6
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 1.3e-21 105.9 53 90.6
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 1.3e-21 105.9 53 90.6
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 1.3e-21 105.9 53 90.6
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.3e-21 105.9 53 90.6
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 2.2e-21 105.1 53 88.7
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 2.9e-21 104.8 53 88.7
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 3.7e-21 104.4 53 88.7
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 8.3e-21 103.2 53 86.8
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 4.1e-20 100.9 53 79.2
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 3.5e-19 97.8 53 81.1
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 6.0e-19 97.1 53 81.1
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 1.3e-18 95.9 56 76.8
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.7e-18 95.5 54 77.8
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 3.0e-18 94.7 53 79.2
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 5.1e-18 94.0 54 75.9
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 6.6e-18 93.6 53 77.4
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 6.6e-18 93.6 53 77.4
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 6.6e-18 93.6 53 77.4
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 6.6e-18 93.6 53 77.4
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 8.6e-18 93.2 53 77.4
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 1.1e-17 92.8 53 73.6
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 1.1e-17 92.8 53 75.5
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 1.1e-17 92.8 53 75.5
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 1.1e-17 92.8 53 77.4
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.1e-17 92.8 53 75.5
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.1e-17 92.8 53 79.2
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.1e-17 92.8 53 75.5
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 1.5e-17 92.4 54 74.1
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.5e-17 92.4 54 74.1
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.5e-17 92.4 54 74.1
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 1.5e-17 92.4 53 75.5
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 1.5e-17 92.4 53 73.6
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 1.5e-17 92.4 53 75.5
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 1.5e-17 92.4 53 77.4
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 1.5e-17 92.4 54 72.2
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.5e-17 92.4 57 70.2
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 1.9e-17 92.0 53 75.5
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.9e-17 92.0 54 72.2
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.9e-17 92.0 54 74.1
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.9e-17 92.0 53 73.6
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 2.5e-17 91.7 53 77.4
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 2.5e-17 91.7 53 73.6
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 2.5e-17 91.7 53 73.6
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 2.5e-17 91.7 53 73.6
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 2.5e-17 91.7 53 73.6
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 3.3e-17 91.3 53 73.6
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 3.3e-17 91.3 53 71.7
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.3e-17 90.9 57 68.4
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 4.3e-17 90.9 53 71.7
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 4.3e-17 90.9 53 71.7
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 4.3e-17 90.9 53 73.6
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 4.3e-17 90.9 53 75.5
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 5.6e-17 90.5 53 75.5
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 5.6e-17 90.5 53 73.6
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 5.6e-17 90.5 53 73.6
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 5.6e-17 90.5 53 73.6
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 7.3e-17 90.1 54 70.4
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 7.3e-17 90.1 53 69.8
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 7.3e-17 90.1 53 69.8
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 7.3e-17 90.1 53 69.8
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 7.3e-17 90.1 53 73.6
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 7.3e-17 90.1 53 73.6
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 7.3e-17 90.1 53 71.7
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 73.6
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 71.7
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 71.7
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 69.8
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 73.6
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 71.7
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 73.6
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 9.5e-17 89.7 53 71.7
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 1.2e-16 89.4 53 75.5
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 1.2e-16 89.4 53 73.6
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.2e-16 89.4 53 71.7
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 1.2e-16 89.4 53 75.5
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 1.6e-16 89.0 53 73.6
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.6e-16 89.0 53 67.9
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 1.6e-16 89.0 53 71.7
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 1.6e-16 89.0 53 73.6
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 1.6e-16 89.0 53 73.6
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 1.6e-16 89.0 53 69.8
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 2.1e-16 88.6 53 69.8
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 2.1e-16 88.6 54 70.4
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.1e-16 88.6 53 73.6
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 2.8e-16 88.2 57 66.7
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 71.7
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 69.8
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 69.8
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 69.8
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 73.6
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 73.6
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 69.8
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 2.8e-16 88.2 53 71.7
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 3.6e-16 87.8 53 71.7
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 3.6e-16 87.8 53 69.8
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 3.6e-16 87.8 53 69.8
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 4.7e-16 87.4 53 69.8
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 4.7e-16 87.4 54 70.4
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 4.7e-16 87.4 53 69.8
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 4.7e-16 87.4 53 71.7
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 4.7e-16 87.4 53 67.9
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 4.7e-16 87.4 53 69.8
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 4.7e-16 87.4 53 71.7
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 4.7e-16 87.4 53 71.7
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 6.2e-16 87.0 53 71.7
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 6.2e-16 87.0 53 69.8
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 6.2e-16 87.0 53 67.9
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 6.2e-16 87.0 53 69.8
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 8.1e-16 86.7 53 67.9
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 8.1e-16 86.7 53 69.8
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 8.1e-16 86.7 53 69.8
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 8.1e-16 86.7 53 67.9
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 8.1e-16 86.7 53 67.9
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.1e-15 86.3 53 67.9
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 1.1e-15 86.3 53 67.9
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 1.4e-15 85.9 53 69.8
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 1.4e-15 85.9 53 69.8
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 1.8e-15 85.5 53 71.7
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 2.3e-15 85.1 53 66.0
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 2.3e-15 85.1 53 71.7
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 3.1e-15 84.7 53 69.8
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 4.0e-15 84.3 53 67.9
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 4.0e-15 84.3 53 62.3
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 4.0e-15 84.3 53 67.9
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 4.0e-15 84.3 53 66.0
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 5.2e-15 84.0 53 62.3
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 6.8e-15 83.6 53 66.0
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 6.8e-15 83.6 53 66.0
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 6.8e-15 83.6 53 66.0
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.2e-14 82.8 61 62.3
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.0e-14 82.0 53 67.9
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 1.7e-13 79.0 53 66.0
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 1.7e-13 79.0 57 61.4
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 4.9e-13 77.4 53 60.4
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 4.1e-12 74.3 45 71.1
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 1.6e-11 72.4 86 44.2
CDE02G0645 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 2.1e-11 72.0 44 70.5
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 2.7e-11 71.6 44 68.2
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 6.0e-11 70.5 53 50.9
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 3.3e-09 64.7 35 85.7
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 6.8e-07 57.0 53 43.4


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