Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 2.2e-51 205.3 100 100.0
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 1.1e-50 203.0 100 99.0
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 1.1e-50 203.0 100 99.0
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 2.5e-47 191.8 100 94.0
BraA02t09356Z Brassica rapa HOM05D011091 ORTHO05D013198 2.6e-44 181.8 100 92.0
BcaB07g29654 Brassica carinata HOM05D011091 ORTHO05D013198 3.6e-38 161.4 100 82.0
CARHR280880 Cardamine hirsuta HOM05D011091 ORTHO05D013198 1.5e-31 139.4 101 68.3
Thhalv10005488m.g Eutrema salsugineum HOM05D011091 ORTHO05D013198 1.8e-29 132.5 107 65.4
AL8G44630 Arabidopsis lyrata HOM05D011091 ORTHO05D013198 5.8e-28 127.5 105 64.8
AT5G66815 Arabidopsis thaliana HOM05D011091 ORTHO05D013198 3.8e-27 124.8 105 64.8
A07p17100 Brassica napus HOM05D011091 ORTHO05D013198 7.1e-26 120.6 103 63.1
BraA07t29437Z Brassica rapa HOM05D011091 ORTHO05D013198 1.6e-25 119.4 103 62.1
BolC7t43026H Brassica oleracea HOM05D011091 ORTHO05D013198 1.3e-24 116.3 103 61.2
Carub.0008s2769 Capsella rubella HOM05D011091 ORTHO05D013198 2.3e-24 115.5 102 60.8
C07p24960 Brassica napus HOM05D011091 ORTHO05D013198 8.7e-24 113.6 103 60.2
Sp2g29860 Schrenkiella parvula HOM05D011091 ORTHO05D013198 9.6e-23 110.2 100 63.0
BcaB02g09987 Brassica carinata HOM05D011091 ORTHO05D013198 3.4e-20 101.7 103 60.2
BcaC06g34751 Brassica carinata HOM05D011091 ORTHO05D013198 3.8e-11 71.6 66 59.1
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 1.3e-08 63.2 121 34.7
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 1.8e-08 62.8 112 33.9
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 1.5e-07 59.7 116 34.5
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 2.5e-07 58.9 115 32.2
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 2.5e-07 58.9 115 33.9
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 4.3e-07 58.2 114 35.1
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 5.7e-07 57.8 100 37.0
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 5.7e-07 57.8 100 38.0
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 9.6e-07 57.0 106 37.7
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.3e-06 56.6 106 37.7
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.3e-06 56.6 98 35.7
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.6e-06 56.2 98 35.7
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.6e-06 56.2 98 35.7
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 1.6e-06 56.2 97 33.0
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 1.6e-06 56.2 97 33.0
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 2.1e-06 55.8 120 30.8
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 2.1e-06 55.8 116 32.8
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 2.1e-06 55.8 116 31.9


User provided reference genes

Program Settings