Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 1.6e-49 199.1 104 100.0
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 4.4e-47 191.0 114 91.2
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 1.3e-27 126.3 112 66.1
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 2.8e-25 118.6 106 66.0
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 3.1e-24 115.2 110 64.5
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 4.6e-20 101.3 112 57.1
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 7.9e-20 100.5 99 60.6
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 7.9e-20 100.5 99 60.6
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 1.1e-18 96.7 124 53.2
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 1.5e-18 96.3 125 52.8
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 2.2e-17 92.4 93 58.1
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 4.8e-17 91.3 117 52.1
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 2.6e-15 85.5 82 62.2
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 3.4e-15 85.1 109 49.5
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 5.9e-15 84.3 116 47.4
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 3.8e-14 81.6 110 45.5
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 3.8e-14 81.6 116 44.0
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 8.5e-14 80.5 119 47.9
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 2.5e-13 79.0 111 44.1
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 4.2e-13 78.2 111 46.8
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 5.5e-13 77.8 117 44.4
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 5.5e-13 77.8 117 44.4
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 7.2e-13 77.4 127 40.9
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 7.2e-13 77.4 117 43.6
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 9.4e-13 77.0 111 45.9
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 9.4e-13 77.0 110 45.5
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 9.4e-13 77.0 111 45.9
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 9.4e-13 77.0 120 45.8
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 1.6e-12 76.3 119 43.7
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.6e-12 76.3 109 45.0
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 2.1e-12 75.9 111 43.2
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 2.1e-12 75.9 109 44.0
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 2.1e-12 75.9 108 44.4
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 2.7e-12 75.5 118 44.9
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 3.6e-12 75.1 93 49.5
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 3.6e-12 75.1 110 46.4
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 4.6e-12 74.7 113 43.4
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 6.1e-12 74.3 93 50.5
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 7.9e-12 73.9 105 44.8
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 7.9e-12 73.9 110 46.4
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 7.9e-12 73.9 110 44.5
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 1.0e-11 73.6 126 39.7
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 1.8e-11 72.8 119 42.9
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 1.8e-11 72.8 112 43.8
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 2.3e-11 72.4 107 42.1
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 2.3e-11 72.4 111 45.0
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 2.3e-11 72.4 111 43.2
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 2.3e-11 72.4 112 44.6
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 3.0e-11 72.0 106 45.3
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 3.0e-11 72.0 112 44.6
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 3.0e-11 72.0 118 41.5
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 3.0e-11 72.0 112 43.8
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 3.9e-11 71.6 111 41.4
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 3.9e-11 71.6 103 45.6
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 3.9e-11 71.6 112 42.9
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 5.1e-11 71.2 114 42.1
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 6.7e-11 70.9 88 47.7
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 6.7e-11 70.9 128 37.5
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 6.7e-11 70.9 128 39.1
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 8.8e-11 70.5 110 42.7
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 8.8e-11 70.5 101 47.5
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 8.8e-11 70.5 91 47.3
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 1.1e-10 70.1 104 44.2
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 1.1e-10 70.1 108 41.7
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 1.1e-10 70.1 111 44.1
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 1.5e-10 69.7 101 44.6
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 1.5e-10 69.7 86 50.0
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 1.5e-10 69.7 88 46.6
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 2.0e-10 69.3 113 40.7
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 2.0e-10 69.3 108 42.6
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 2.0e-10 69.3 104 47.1
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 2.0e-10 69.3 109 43.1
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 2.0e-10 69.3 102 45.1
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.3e-10 68.6 128 37.5
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 4.3e-10 68.2 88 46.6
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 5.7e-10 67.8 98 44.9
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 9.7e-10 67.0 87 47.1
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 1.3e-09 66.6 91 42.9
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 1.3e-09 66.6 91 42.9
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.3e-09 66.6 126 39.7
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 1.7e-09 66.2 109 38.5
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 1.7e-09 66.2 112 42.9
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 2.2e-09 65.9 113 39.8
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 2.8e-09 65.5 97 44.3
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 2.8e-09 65.5 111 44.1
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 2.8e-09 65.5 107 42.1
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 3.7e-09 65.1 109 42.2
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 6.3e-09 64.3 101 44.6
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.8e-08 62.8 103 41.7
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 2.4e-08 62.4 92 40.2
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 3.1e-08 62.0 82 45.1
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 4.1e-08 61.6 120 39.2
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 4.1e-08 61.6 104 38.5
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 4.1e-08 61.6 92 44.6
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 9.1e-08 60.5 140 35.0
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 1.2e-07 60.1 99 40.4
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.2e-07 60.1 85 41.2
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.5e-07 59.7 112 37.5
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 2.0e-07 59.3 48 60.4
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 2.0e-07 59.3 103 40.8
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 2.0e-07 59.3 103 40.8
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 5.9e-07 57.8 109 40.4
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 1.7e-06 56.2 102 42.2


User provided reference genes

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