Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p63470 Brassica napus HOM05D000314 ORTHO05D101177 1.3e-66 256.1 124 100.0
A08p09840 Brassica napus HOM05D000314 ORTHO05D015512 6.3e-40 167.5 96 87.5
C02p09280 Brassica napus HOM05D000314 ORTHO05D015512 6.3e-40 167.5 96 87.5
C09p30860 Brassica napus HOM05D000314 ORTHO05D000189 6.3e-40 167.5 96 87.5
BolC2t06836H Brassica oleracea HOM05D000314 ORTHO05D015512 6.3e-40 167.5 96 87.5
BraA08t32978Z Brassica rapa HOM05D000314 ORTHO05D015512 6.3e-40 167.5 96 87.5
C01p04030 Brassica napus HOM05D000314 ORTHO05D015512 1.8e-39 166.0 96 86.5
BolC5t34355H Brassica oleracea HOM05D000314 ORTHO05D015512 2.4e-39 165.6 95 87.4
C03p31700 Brassica napus HOM05D000314 ORTHO05D015512 1.2e-38 163.3 95 86.3
BcaC05g29385 Brassica carinata HOM05D000314 ORTHO05D015512 6.3e-24 114.4 77 74.0
C01p38080 Brassica napus HOM05D000314 ORTHO05D015512 1.3e-21 106.7 95 61.1
BolC1t03773H Brassica oleracea HOM05D000314 ORTHO05D015512 1.3e-21 106.7 95 61.1
BcaC03g13538 Brassica carinata HOM05D000314 ORTHO05D000189 7.5e-17 90.9 44 95.5
BcaC06g35478 Brassica carinata HOM05D000314 ORTHO05D000189 7.5e-17 90.9 70 62.9
BcaB01g03473 Brassica carinata HOM05D000314 ORTHO05D000189 9.8e-17 90.5 103 54.4
C05p56910 Brassica napus HOM05D000314 ORTHO05D015512 6.3e-16 87.8 50 80.0
A03p23220 Brassica napus HOM05D000314 ORTHO05D000189 1.4e-15 86.7 89 55.1
BraA03t11541Z Brassica rapa HOM05D000314 ORTHO05D000189 1.4e-15 86.7 89 55.1
Thhalv10016702m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 5.4e-15 84.7 103 50.5
C03p27720 Brassica napus HOM05D000314 ORTHO05D000189 7.0e-15 84.3 89 55.1
BcaC01g05342 Brassica carinata HOM05D000314 ORTHO05D000189 4.5e-14 81.6 89 53.9
BolC3t15141H Brassica oleracea HOM05D000314 ORTHO05D000189 4.5e-14 81.6 89 53.9
CARHR136430 Cardamine hirsuta HOM05D000314 ORTHO05D000189 1.0e-13 80.5 81 59.3
AL4G39320 Arabidopsis lyrata HOM05D000314 ORTHO05D000189 1.7e-13 79.7 90 52.2
Sp4g23620 Schrenkiella parvula HOM05D000314 ORTHO05D000189 2.9e-13 79.0 103 48.5
BcaC09g49306 Brassica carinata HOM05D000314 ORTHO05D015512 8.5e-13 77.4 37 91.9
Carub.0004s2363 Capsella rubella HOM05D000314 ORTHO05D000189 1.5e-12 76.6 85 52.9
C04p68930 Brassica napus HOM05D000314 ORTHO05D000189 1.9e-12 76.3 79 51.9
BolC4t28394H Brassica oleracea HOM05D000314 ORTHO05D000189 1.9e-12 76.3 79 51.9
A04p31500 Brassica napus HOM05D000314 ORTHO05D000189 4.2e-12 75.1 79 50.6
BraA04t18607Z Brassica rapa HOM05D000314 ORTHO05D000189 4.2e-12 75.1 79 50.6
AT2G41330 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 2.7e-11 72.4 85 49.4
BcaC07g40049 Brassica carinata HOM05D000314 ORTHO05D000189 7.5e-09 64.3 79 50.6
BcaC07g40079 Brassica carinata HOM05D000314 ORTHO05D000189 7.5e-09 64.3 79 50.6
Thhalv10005993m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 3.7e-08 62.0 92 46.7
BcaC07g40023 Brassica carinata HOM05D000314 ORTHO05D000189 6.3e-08 61.2 76 51.3
C08p32410 Brassica napus HOM05D000314 ORTHO05D000189 6.3e-08 61.2 76 51.3
BolC8t50855H Brassica oleracea HOM05D000314 ORTHO05D000189 6.3e-08 61.2 76 51.3
AL5G38560 Arabidopsis lyrata HOM05D000314 ORTHO05D000189 2.4e-07 59.3 86 44.2
Aa31LG10G12000 Aethionema arabicum HOM05D000314 ORTHO05D000189 7.0e-07 57.8 108 41.7
Manes.09G007700 Manihot esculenta HOM05D000314 ORTHO05D000189 9.2e-07 57.4 89 42.7
CARHR167270 Cardamine hirsuta HOM05D000314 ORTHO05D000189 1.2e-06 57.0 85 44.7
Carub.0005s2388 Capsella rubella HOM05D000314 ORTHO05D000189 2.0e-06 56.2 88 40.9
A09p50000 Brassica napus HOM05D000314 ORTHO05D000189 2.7e-06 55.8 73 47.9
BraA09t40450Z Brassica rapa HOM05D000314 ORTHO05D000189 2.7e-06 55.8 73 47.9
Manes.08G057300 Manihot esculenta HOM05D000314 ORTHO05D000189 2.7e-06 55.8 91 42.9
Sp5g05510 Schrenkiella parvula HOM05D000314 ORTHO05D000189 2.7e-06 55.8 91 41.8
AT3G57070 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 3.5e-06 55.5 103 39.8
TPR.G23843 Trifolium pratense HOM05D000314 ORTHO05D000189 3.5e-06 55.5 55 56.4
Ah.13g076970 Amaranthus hybridus HOM05D000314 ORTHO05D000189 5.9e-06 54.7 100 39.0
Ca_02741_v3 Cicer arietinum L. HOM05D000314 ORTHO05D000189 5.9e-06 54.7 45 62.2
Lsat_1_v5_gn_3_100480 Lactuca sativa HOM05D000314 ORTHO05D000189 7.7e-06 54.3 97 36.1
Potri.006G041800 Populus trichocarpa HOM05D000314 ORTHO05D000189 7.7e-06 54.3 68 48.5


User provided reference genes

Program Settings