Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 1.5e-179 632.9 342 100.0
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 3.7e-167 591.7 342 94.7
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 7.3e-139 497.7 299 91.3
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 7.3e-139 497.7 299 91.3
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.0e-92 344.4 331 58.3
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 1.9e-91 340.1 332 57.8
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 4.1e-89 332.4 286 69.6
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 4.7e-85 318.9 174 93.7
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 8.8e-84 314.7 196 91.3
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.7e-82 310.5 286 61.5
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 4.5e-80 302.4 294 67.7
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 3.2e-70 269.6 330 56.4
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 3.2e-70 269.6 288 61.1
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 7.2e-70 268.5 288 60.4
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 4.7e-69 265.8 288 61.5
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 2.2e-66 256.9 330 55.2
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 3.1e-65 253.1 330 54.5
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 4.1e-65 252.7 288 58.7
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 1.1e-62 244.6 179 70.4
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 5.7e-59 232.3 299 52.5
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.0e-55 221.5 143 79.7
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 5.5e-54 215.7 179 74.9
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 2.1e-53 213.8 202 56.9
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 3.6e-53 213.0 301 46.5
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 3.6e-53 213.0 202 56.9
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 3.6e-53 213.0 202 56.9
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 1.3e-50 204.5 204 55.9
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 3.1e-49 199.9 202 54.0
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 9.2e-49 198.4 204 54.9
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 2.7e-48 196.8 202 53.5
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 3.5e-48 196.4 202 53.0
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 7.8e-48 195.3 202 53.0
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 7.3e-46 188.7 243 58.0
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 1.2e-45 188.0 204 54.9
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 1.6e-45 187.6 204 54.4
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 2.1e-45 187.2 189 56.1
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 6.1e-45 185.7 171 69.0
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 4.0e-44 183.0 204 54.4
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 5.8e-43 179.1 200 51.0
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 7.5e-43 178.7 190 54.7
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 9.8e-43 178.3 190 53.7
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 2.2e-42 177.2 200 50.5
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 6.4e-42 175.6 173 65.9
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 2.7e-40 170.2 113 73.5
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 4.6e-40 169.5 175 57.1
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 4.6e-40 169.5 171 67.8
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.1e-38 164.9 202 47.5
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 2.5e-38 163.7 348 42.0
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 7.3e-38 162.2 131 66.4
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 7.3e-38 162.2 131 66.4
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 3.6e-37 159.8 131 65.6
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 6.2e-37 159.1 131 65.6
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 2.3e-36 157.1 131 64.9
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.3e-31 141.4 166 51.8
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 3.9e-31 139.8 163 52.1
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 1.6e-29 134.4 231 49.4
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 2.8e-29 133.7 139 58.3
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 1.5e-27 127.9 162 58.0
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 1.3e-26 124.8 133 52.6
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 8.3e-26 122.1 122 54.9
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 4.6e-24 116.3 159 46.5
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 2.3e-23 114.0 121 52.1
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 2.3e-23 114.0 181 40.3
BcaC07g37563 Brassica carinata HOM05D007694 ORTHO05D091300 1.5e-19 101.3 136 63.2
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 5.8e-19 99.4 60 76.7
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 5.8e-19 99.4 60 76.7
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 2.2e-18 97.4 197 40.6
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 2.4e-17 94.0 185 41.6
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 3.2e-17 93.6 183 38.8
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 3.2e-17 93.6 185 41.6
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 5.4e-17 92.8 103 49.5
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 9.2e-17 92.0 181 39.8
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 1.2e-16 91.7 183 37.7
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 2.1e-16 90.9 104 48.1
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 2.7e-16 90.5 105 52.4
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 7.8e-16 89.0 105 52.4
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 1.0e-15 88.6 171 38.0
BcaNung05554 Brassica carinata HOM05D007694 ORTHO05D019980 2.3e-15 87.4 109 58.7
BcaC01g05258 Brassica carinata HOM05D007694 ORTHO05D096253 3.0e-15 87.0 122 63.9
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 1.5e-14 84.7 169 37.3
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 2.5e-14 84.0 149 38.9
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 3.3e-14 83.6 160 39.4
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 3.3e-14 83.6 160 39.4
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 5.6e-14 82.8 194 37.6
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 1.2e-13 81.6 136 43.4
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 1.6e-13 81.3 182 35.7
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.6e-13 81.3 154 39.6
C04p15290 Brassica napus HOM05D007694 ORTHO05D103098 2.1e-13 80.9 44 90.9
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 3.6e-13 80.1 56 75.0
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 3.6e-13 80.1 151 40.4
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 8.1e-13 79.0 152 39.5
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 1.8e-12 77.8 113 45.1
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 3.1e-12 77.0 108 47.2
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 5.3e-12 76.3 98 44.9
A02p28260 Brassica napus HOM05D012090 ORTHO05D016799 1.2e-11 75.1 48 72.9
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 1.5e-11 74.7 86 48.8
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 2.6e-11 73.9 77 51.9
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 2.6e-11 73.9 77 51.9
C05p30650 Brassica napus HOM05D012090 ORTHO05D016799 4.4e-11 73.2 52 73.1
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 7.6e-11 72.4 68 58.8
BolC5t31798H Brassica oleracea HOM05D012090 ORTHO05D016799 7.6e-11 72.4 52 73.1
BraA02t05833Z Brassica rapa HOM05D012090 ORTHO05D012993 7.6e-11 72.4 56 67.9
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 2.2e-10 70.9 139 51.1
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 2.2e-10 70.9 155 35.5
BraA02t07861Z Brassica rapa HOM05D012090 ORTHO05D027211 2.2e-10 70.9 48 68.8
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 3.8e-10 70.1 100 42.0
BolC7t42700H Brassica oleracea HOM05D012090 ORTHO05D016799 4.9e-10 69.7 46 71.7
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 6.4e-10 69.3 70 58.6
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 8.4e-10 68.9 173 35.8
C07p21690 Brassica napus HOM05D012090 ORTHO05D016799 1.1e-09 68.6 75 50.7
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 1.4e-09 68.2 173 35.8
BcaC05g27170 Brassica carinata HOM05D012090 ORTHO05D016799 1.9e-09 67.8 45 73.3
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 2.4e-09 67.4 78 53.8
C04p72940 Brassica napus HOM05D007694 ORTHO05D040685 5.4e-09 66.2 51 68.6
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 5.4e-09 66.2 117 41.9
BolC4t28328H Brassica oleracea HOM05D007694 ORTHO05D040685 1.6e-08 64.7 51 68.6
C09p15890 Brassica napus HOM05D009681 ORTHO05D013235 4.6e-08 63.2 76 48.7
BolC6t36831H Brassica oleracea HOM05D009832 ORTHO05D106286 4.6e-08 63.2 56 55.4
C06p16310 Brassica napus HOM05D009832 ORTHO05D032737 7.8e-08 62.4 57 54.4
A09p60520 Brassica napus HOM05D010036 ORTHO05D102689 1.3e-07 61.6 41 75.6
A09p41260 Brassica napus HOM05D016611 ORTHO05D099774 3.0e-07 60.5 48 60.4
A10p16920 Brassica napus HOM05D000041 ORTHO05D000061 3.0e-07 60.5 194 28.4
BraA01t02818Z Brassica rapa HOM05D022130 ORTHO05D021584 3.0e-07 60.5 41 65.9
BraA01t00165Z Brassica rapa HOM05D009832 ORTHO05D012823 3.9e-07 60.1 43 65.1
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 5.1e-07 59.7 61 57.4
BcaC04g22211 Brassica carinata HOM05D040530 ORTHO05D032573 6.6e-07 59.3 50 66.0
BcaC06g34930 Brassica carinata HOM05D012090 ORTHO05D016799 1.9e-06 57.8 68 48.5
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 1.9e-06 57.8 88 42.0
C07p46450 Brassica napus HOM05D009681 ORTHO05D013235 2.5e-06 57.4 120 36.7
C01p13390 Brassica napus HOM05D009832 ORTHO05D012823 3.3e-06 57.0 40 65.0
C06p03760 Brassica napus HOM05D009832 ORTHO05D012823 4.3e-06 56.6 43 67.4
C09p46020 Brassica napus HOM05D007694 ORTHO05D099111 4.3e-06 56.6 66 51.5
BcaB07g34043 Brassica carinata HOM05D000075 ORTHO05D000264 5.6e-06 56.2 86 57.0


User provided reference genes

Program Settings