Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p60300 Brassica napus HOM05D008478 ORTHO05D000925 2.3e-38 161.8 84 100.0
BcaC06g34500 Brassica carinata HOM05D000003 ORTHO05D000925 1.9e-32 142.1 84 91.7
BolC7t43314H Brassica oleracea HOM05D008478 ORTHO05D000925 5.6e-32 140.6 84 90.5
BraA07t28030Z Brassica rapa HOM05D008478 ORTHO05D000925 5.6e-24 114.0 80 71.2
A06p41350 Brassica napus HOM05D008478 ORTHO05D000925 1.1e-22 109.8 82 69.5
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 1.1e-22 109.8 82 69.5
BcaC02g09573 Brassica carinata HOM05D001239 ORTHO05D000925 6.8e-22 107.1 84 63.1
BolC4t26004H Brassica oleracea HOM05D008478 ORTHO05D000925 6.8e-22 107.1 84 63.1
BcaB06g28514 Brassica carinata HOM05D001239 ORTHO05D000925 8.9e-22 106.7 81 64.2
A04p26810 Brassica napus HOM05D008478 ORTHO05D000925 1.5e-21 105.9 80 68.8
BolC8t52815H Brassica oleracea HOM05D001239 ORTHO05D000925 2.6e-21 105.1 78 67.9
BolC9t58964H Brassica oleracea HOM05D008478 ORTHO05D000925 2.6e-21 105.1 84 61.9
A02p15660 Brassica napus HOM05D008478 ORTHO05D000925 3.4e-21 104.8 82 63.4
BraA02t06627Z Brassica rapa HOM05D008478 ORTHO05D000925 4.4e-21 104.4 82 62.2
BolC7t45952H Brassica oleracea HOM05D008478 ORTHO05D000925 5.8e-21 104.0 84 60.7
BolC9t58145H Brassica oleracea HOM05D001239 ORTHO05D000925 9.9e-21 103.2 77 68.8
BcaC03g15329 Brassica carinata HOM05D001239 ORTHO05D000925 1.7e-20 102.4 81 61.7
BcaC07g37243 Brassica carinata HOM05D000003 ORTHO05D000925 6.4e-20 100.5 81 63.0
BolC8t47511H Brassica oleracea HOM05D001239 ORTHO05D000925 6.4e-20 100.5 81 63.0
BcaB03g15427 Brassica carinata HOM05D001239 ORTHO05D000925 1.1e-19 99.8 84 63.1
BcaC09g51831 Brassica carinata HOM05D001239 ORTHO05D000925 5.1e-17 90.9 81 56.8
BolC1t00846H Brassica oleracea HOM05D001239 ORTHO05D000925 5.1e-17 90.9 81 56.8
A07p11610 Brassica napus HOM05D008478 ORTHO05D000925 1.5e-16 89.4 68 66.2
BcaB08g35549 Brassica carinata HOM05D001239 ORTHO05D000925 2.5e-16 88.6 72 63.9
BraA10t45304Z Brassica rapa HOM05D008478 ORTHO05D000925 1.8e-14 82.4 61 65.6
BraA06t26208Z Brassica rapa HOM05D008478 ORTHO05D000925 5.2e-14 80.9 57 68.4
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 8.9e-14 80.1 82 53.7
BcaB01g00822 Brassica carinata HOM05D008478 ORTHO05D000925 2.0e-13 79.0 79 54.4
A01p06330 Brassica napus HOM05D008478 ORTHO05D027660 1.2e-10 69.7 77 48.1
BraA02t05251Z Brassica rapa HOM05D008478 ORTHO05D027660 1.2e-10 69.7 77 48.1
BcaB01g03994 Brassica carinata HOM05D008478 ORTHO05D013784 2.7e-10 68.6 74 52.7
BcaNung00355 Brassica carinata HOM05D008478 ORTHO05D013784 2.7e-10 68.6 74 52.7
BcaB01g02635 Brassica carinata HOM05D008478 ORTHO05D013784 3.5e-10 68.2 74 52.7
BcaB04g17537 Brassica carinata HOM05D008478 ORTHO05D016555 4.6e-10 67.8 78 51.3
BcaC01g00419 Brassica carinata HOM05D008478 ORTHO05D013784 4.6e-10 67.8 77 46.8
BraA09t36306Z Brassica rapa HOM05D008478 ORTHO05D013784 1.7e-09 65.9 77 45.5
A07p43230 Brassica napus HOM05D008478 ORTHO05D013784 3.0e-09 65.1 77 44.2
BraA04t17855Z Brassica rapa HOM05D008478 ORTHO05D013784 3.0e-09 65.1 77 44.2
Thhalv10019721m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 3.0e-09 65.1 76 51.3
A03p05330 Brassica napus HOM05D008478 ORTHO05D013784 5.1e-09 64.3 77 44.2
BNapus_Darmor_BZH_scaffold_118p00230 Brassica napus HOM05D008478 ORTHO05D013784 5.1e-09 64.3 77 44.2
BolC5t33152H Brassica oleracea HOM05D001239 ORTHO05D000925 8.7e-09 63.5 83 42.2
BcaB06g27392 Brassica carinata HOM05D008478 ORTHO05D000740 1.1e-08 63.2 58 56.9
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 1.1e-08 63.2 77 44.2
BraA04t15947Z Brassica rapa HOM05D008478 ORTHO05D013784 2.5e-08 62.0 77 42.9
BraA08t34484Z Brassica rapa HOM05D008653 ORTHO05D000925 2.5e-08 62.0 79 45.6
Sp1g01750 Schrenkiella parvula HOM05D001239 ORTHO05D000925 3.3e-08 61.6 79 41.8
BraA03t11474Z Brassica rapa HOM05D001239 ORTHO05D024661 4.3e-08 61.2 77 44.2
BraA04t16685Z Brassica rapa HOM05D001239 ORTHO05D024661 4.3e-08 61.2 77 44.2
C07p26790 Brassica napus HOM05D001239 ORTHO05D000925 7.3e-08 60.5 79 43.0
Thhalv10011157m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 7.3e-08 60.5 76 42.1
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 9.6e-08 60.1 82 41.5
C05p19460 Brassica napus HOM05D001239 ORTHO05D000925 9.6e-08 60.1 82 41.5
BolC6t36543H Brassica oleracea HOM05D001239 ORTHO05D024661 9.6e-08 60.1 77 41.6
BolC7t43208H Brassica oleracea HOM05D001239 ORTHO05D000925 9.6e-08 60.1 76 43.4
BcaC08g45635 Brassica carinata HOM05D008478 ORTHO05D013784 1.2e-07 59.7 77 42.9
C06p13710 Brassica napus HOM05D001239 ORTHO05D024661 1.6e-07 59.3 77 40.3
BolC9t53787H Brassica oleracea HOM05D001239 ORTHO05D024661 1.6e-07 59.3 77 41.6
C03p84910 Brassica napus HOM05D008478 ORTHO05D013784 2.1e-07 58.9 70 45.7
BolC3t20783H Brassica oleracea HOM05D008478 ORTHO05D013784 2.1e-07 58.9 70 45.7
BolC1t00761H Brassica oleracea HOM05D008653 ORTHO05D000925 3.6e-07 58.2 76 40.8
C01p44960 Brassica napus HOM05D008478 ORTHO05D000925 4.7e-07 57.8 82 45.1
BolC6t35664H Brassica oleracea HOM05D008653 ORTHO05D000925 8.1e-07 57.0 79 41.8
AL3G32130 Arabidopsis lyrata HOM05D011429 ORTHO05D000925 1.1e-06 56.6 76 40.8
AL3G48000 Arabidopsis lyrata HOM05D012944 ORTHO05D014028 1.1e-06 56.6 83 38.6
BolC8t51300H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-06 56.6 76 40.8
BcaB03g15260 Brassica carinata HOM05D009426 ORTHO05D014948 1.4e-06 56.2 79 43.0
BcaNung06997 Brassica carinata HOM05D008478 ORTHO05D027660 1.4e-06 56.2 59 49.2
BraA04t18055Z Brassica rapa HOM05D008653 ORTHO05D000925 1.8e-06 55.8 69 39.1
Thhalv10023022m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 1.8e-06 55.8 76 39.5
BcaB06g27369 Brassica carinata HOM05D009426 ORTHO05D014948 2.4e-06 55.5 59 50.8
AL2G28950 Arabidopsis lyrata HOM05D012944 ORTHO05D014028 3.1e-06 55.1 83 37.3
BolC6t37992H Brassica oleracea HOM05D010756 ORTHO05D000925 4.0e-06 54.7 76 35.5
BolC9t58220H Brassica oleracea HOM05D008653 ORTHO05D000925 4.0e-06 54.7 79 40.5
Thhalv10028180m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 4.0e-06 54.7 81 35.8
Sp7g01630 Schrenkiella parvula HOM05D001239 ORTHO05D000925 4.0e-06 54.7 79 39.2
Thhalv10017605m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 5.2e-06 54.3 79 38.0
BraA03t13572Z Brassica rapa HOM05D008653 ORTHO05D000925 6.9e-06 53.9 76 36.8
Thhalv10003494m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 6.9e-06 53.9 80 35.0
AL1G55340 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 9.0e-06 53.5 83 36.1
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 9.0e-06 53.5 76 38.2
BraA08t32764Z Brassica rapa HOM05D012699 ORTHO05D000925 9.0e-06 53.5 76 42.1


User provided reference genes

Program Settings