Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p60290 Brassica napus HOM05D003812 ORTHO05D004393 3.0e-299 1031.2 547 100.0
BolC2t12085H Brassica oleracea HOM05D003812 ORTHO05D004393 2.5e-290 1001.5 547 97.4
A02p40330 Brassica napus HOM05D003812 ORTHO05D004393 7.7e-287 989.9 548 95.6
BcaC03g17974 Brassica carinata HOM05D003812 ORTHO05D004393 8.2e-281 969.9 547 95.2
BraA02t09001Z Brassica rapa HOM05D003812 ORTHO05D004393 1.3e-273 946.0 552 92.4
BcaB07g29910 Brassica carinata HOM05D003812 ORTHO05D004393 2.2e-273 945.3 549 84.7
Sp2g22880 Schrenkiella parvula HOM05D003812 ORTHO05D004393 8.3e-257 890.2 552 83.3
BcaC03g17970 Brassica carinata HOM05D003812 ORTHO05D004393 6.8e-251 870.5 547 87.9
Thhalv10003925m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 4.7e-244 847.8 556 79.3
CARHR188960 Cardamine hirsuta HOM05D003812 ORTHO05D004393 4.4e-242 841.3 555 76.2
AT5G24450 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 4.3e-237 824.7 558 75.1
AL6G36030 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 3.7e-233 811.6 552 78.1
Carub.0006s2228 Capsella rubella HOM05D003812 ORTHO05D004393 2.3e-230 802.4 553 74.1
Aa31LG11G3700 Aethionema arabicum HOM05D003812 ORTHO05D004393 2.4e-219 765.8 557 73.4
AT3G49410 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 8.4e-217 757.3 562 71.0
CARHR158380 Cardamine hirsuta HOM05D003812 ORTHO05D004393 1.2e-215 753.4 563 69.1
AL5G29170 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 1.3e-214 750.0 564 71.1
Sp5g12660 Schrenkiella parvula HOM05D003812 ORTHO05D004393 1.5e-213 746.5 557 70.9
BraA01t02385Z Brassica rapa HOM05D003812 ORTHO05D004393 7.3e-213 744.2 559 68.3
A01p24730 Brassica napus HOM05D003812 ORTHO05D004393 9.6e-213 743.8 559 68.2
BolC1t03017H Brassica oleracea HOM05D003812 ORTHO05D004393 5.2e-211 738.0 561 68.4
THA.LOC104814949 Tarenaya hassleriana HOM05D003812 ORTHO05D004393 7.8e-207 724.2 565 66.2
Thhalv10010256m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 5.1e-206 721.5 559 69.4
C01p30850 Brassica napus HOM05D003812 ORTHO05D004393 6.6e-206 721.1 554 67.3
BcaB05g23118 Brassica carinata HOM05D003812 ORTHO05D004393 1.9e-192 676.4 552 64.5
BcaC09g49951 Brassica carinata HOM05D003812 ORTHO05D004393 2.5e-189 666.0 554 64.1
Aa31LG4G17960 Aethionema arabicum HOM05D003812 ORTHO05D004393 3.0e-166 589.3 576 58.3
BcaB07g31049 Brassica carinata HOM05D003812 ORTHO05D004393 1.7e-164 583.6 350 82.6
Cpa.g.sc151.5 Carica papaya HOM05D003812 ORTHO05D004393 7.7e-162 574.7 580 51.7
Thecc.03G204100 Theobroma cacao HOM05D003812 ORTHO05D004393 3.5e-154 549.3 578 51.2
COL.COLO4_16818 Corchorus olitorius HOM05D003812 ORTHO05D004393 6.7e-150 535.0 647 45.7
GSVIVG01038248001 Vitis vinifera HOM05D003812 ORTHO05D004393 1.7e-145 520.4 590 49.0
Atru.chr3.1997_Atru.chr3.1998 Acer truncatum HOM05D003812 ORTHO05D004393 2.9e-145 519.6 585 47.0
Manes.01G010200 Manihot esculenta HOM05D003812 ORTHO05D004393 1.9e-144 516.9 563 51.5
Prupe.7G062100 Prunus persica HOM05D003812 ORTHO05D004393 4.2e-144 515.8 558 49.8
Gorai.004G122600 Gossypium raimondii HOM05D003812 ORTHO05D004393 1.6e-143 513.8 574 48.8
TWI63G1503 Tripterygium wilfordii HOM05D003812 ORTHO05D004393 1.6e-143 513.8 568 49.6
Cfa008512 Carpinus fangiana HOM05D003812 ORTHO05D004393 2.1e-143 513.5 554 49.1
Gohir.D08G113808 Gossypium hirsutum HOM05D003812 ORTHO05D004393 2.7e-143 513.1 576 49.0
MD15G1143400 Malus domestica HOM05D003812 ORTHO05D004393 4.7e-143 512.3 584 47.8
VMungo1215G0546 Vigna mungo HOM05D003812 ORTHO05D004393 1.0e-142 511.1 579 47.3
FvH4_4g37371 Fragaria vesca HOM05D003812 ORTHO05D004393 2.3e-142 510.0 562 48.6
QL10p064313 Quercus lobata HOM05D003812 ORTHO05D004393 3.0e-142 509.6 549 49.4
Actinidia18400 Actinidia chinensis HOM05D003812 ORTHO05D004393 3.4e-141 506.1 579 46.3
Gohir.A08G102525 Gossypium hirsutum HOM05D003812 ORTHO05D004393 7.5e-141 505.0 572 46.7
CSS0041441 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.8e-140 503.1 592 48.6
CANSAT54G2113 Cannabis sativa HOM05D003812 ORTHO05D004393 6.3e-140 501.9 588 48.5
Lj2g0003816 Lotus japonicus HOM05D003812 ORTHO05D004393 6.3e-140 501.9 590 45.3
BolC2t12088H Brassica oleracea HOM05D003812 ORTHO05D004393 1.1e-139 501.1 295 84.4
Glyma.11G082800 Glycine max HOM05D003812 ORTHO05D004393 2.0e-138 496.9 557 49.7
Lj2g0024194 Lotus japonicus HOM05D003812 ORTHO05D004393 2.0e-138 496.9 579 45.3
Ciclev10027241m.g Citrus clementina HOM05D003812 ORTHO05D004393 7.7e-138 495.0 594 49.5
FvH4_1g00230 Fragaria vesca HOM05D003812 ORTHO05D004393 2.9e-137 493.0 550 48.2
Potri.017G007200 Populus trichocarpa HOM05D003812 ORTHO05D004393 6.1e-135 485.3 565 45.3
Ca_17095_v3 Cicer arietinum L. HOM05D003812 ORTHO05D004393 1.0e-134 484.6 571 47.3
Phvul.002G113100 Phaseolus vulgaris HOM05D003812 ORTHO05D004393 1.0e-134 484.6 567 46.2
arahy.Tifrunner.gnm1.ann1.SFVM41 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.3e-132 477.6 576 44.6
Lsat_1_v5_gn_8_131861 Lactuca sativa HOM05D003812 ORTHO05D004393 1.7e-132 477.2 557 47.2
TPR.G11261 Trifolium pratense HOM05D003812 ORTHO05D004393 2.8e-132 476.5 578 45.8
TAR362G0390 Trochodendron aralioides HOM05D003812 ORTHO05D004393 2.8e-132 476.5 619 46.8
Sc25g0002340 Simmondsia chinensis HOM05D003812 ORTHO05D004393 6.3e-132 475.3 483 51.1
BcaB01g00718 Brassica carinata HOM05D003812 ORTHO05D004393 3.1e-131 473.0 286 83.9
arahy.Tifrunner.gnm1.ann1.U9V8RX Arachis hypogaea HOM05D003812 ORTHO05D004393 5.4e-131 472.2 582 44.2
Psat3g143480 Pisum sativum HOM05D003812 ORTHO05D004393 7.0e-131 471.9 573 47.5
MSTRG.26255 Avicennia marina HOM05D003812 ORTHO05D004393 8.6e-129 464.9 600 45.7
ClCG09G014660 Citrullus lanatus HOM05D003812 ORTHO05D004393 8.6e-129 464.9 571 45.0
TPR.G23263 Trifolium pratense HOM05D003812 ORTHO05D004393 1.5e-128 464.2 459 49.7
Migut.K00296 Erythranthe guttata HOM05D003812 ORTHO05D004393 1.9e-128 463.8 482 49.8
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 5.6e-128 462.2 449 53.0
Sabra17G0008000 Salix brachista HOM05D003812 ORTHO05D004393 7.3e-128 461.8 619 42.8
DCAR_023841 Daucus carota HOM05D003812 ORTHO05D004393 9.5e-128 461.5 592 46.6
Sopen12g006540 Solanum pennellii HOM05D003812 ORTHO05D004393 1.6e-127 460.7 624 47.6
FAN07G2723 Fragaria x ananassa HOM05D003812 ORTHO05D004393 4.7e-127 459.1 463 51.6
Medtr7g059160 Medicago truncatula HOM05D003812 ORTHO05D004393 4.0e-126 456.1 592 43.9
CsaV3_5G037130 Cucumis sativus L. HOM05D003812 ORTHO05D004393 8.9e-126 454.9 565 44.2
FAN26G2119 Fragaria x ananassa HOM05D003812 ORTHO05D004393 8.9e-126 454.9 576 44.1
Sed0027703 Sechium edule HOM05D003812 ORTHO05D004393 1.5e-125 454.1 563 44.8
MELO3C026683.2 Cucumis melo HOM05D003812 ORTHO05D004393 6.4e-124 448.7 567 43.7
PGR142G2470 Punica granatum HOM05D003812 ORTHO05D004393 1.1e-123 448.0 590 48.0
CAN.G164.18 Capsicum annuum HOM05D003812 ORTHO05D004393 1.9e-123 447.2 582 45.5
ECA246G4500 Erigeron canadensis HOM05D003812 ORTHO05D004393 1.9e-123 447.2 562 43.6
Nitab4.5_0010162g0010 Nicotiana tabacum HOM05D003812 ORTHO05D004393 5.4e-123 445.7 462 49.4
HanXRQChr05g0135721 Helianthus annuus HOM05D003812 ORTHO05D004393 2.0e-122 443.7 550 45.1
PSO170G6215 Papaver somniferum HOM05D003812 ORTHO05D004393 2.3e-121 440.3 498 45.8
Potri.007G145000 Populus trichocarpa HOM05D003812 ORTHO05D004393 1.1e-120 438.0 459 47.5
Aqoxy7G02949 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 2.5e-120 436.8 625 43.0
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 2.5e-120 436.8 451 50.6
Aqoxy4G02750 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 3.3e-120 436.4 533 45.4
arahy.Tifrunner.gnm1.ann1.B1HR4A Arachis hypogaea HOM05D003812 ORTHO05D004393 2.1e-119 433.7 607 43.7
arahy.Tifrunner.gnm1.ann1.CNXN93 Arachis hypogaea HOM05D003812 ORTHO05D004393 2.1e-119 433.7 607 43.7
Solyc12g011180.3 Solanum lycopersicum HOM05D003812 ORTHO05D004393 5.2e-118 429.1 491 46.8
SalBow5G1511 Salvia bowleyana HOM05D003812 ORTHO05D004393 1.0e-113 414.8 611 44.0
SGA_v2.0_scaffold12G06029 Striga asiatica HOM05D003812 ORTHO05D004393 1.3e-113 414.5 652 40.2
SalBow5G1547 Salvia bowleyana HOM05D003812 ORTHO05D004393 1.7e-113 414.1 613 43.9
Rhsim09G0003800 Rhododendron simsii HOM05D003812 ORTHO05D004393 4.7e-111 406.0 659 36.7
Nn1g08169 Nelumbo nucifera HOM05D003812 ORTHO05D004393 5.8e-109 399.1 430 47.4
EL10Ac3g06164 Beta vulgaris HOM05D003812 ORTHO05D004393 7.8e-106 388.7 548 44.2
unitig_37.g12590 Utricularia gibba HOM05D003812 ORTHO05D004393 4.3e-104 382.9 555 39.8
Lj4C178G3 Lonicera japonica HOM05D003812 ORTHO05D004393 1.4e-102 377.9 609 38.3
Nitab4.5_0003520g0020 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.2e-101 374.8 476 43.9
CiPaw.01G201400 Carya illinoinensis HOM05D003812 ORTHO05D004393 5.8e-101 372.5 427 47.1
Peaxi162Scf00463g00428 Petunia axillaris HOM05D003812 ORTHO05D004393 1.1e-99 368.2 493 42.6
Zm00001eb420200 Zea mays HOM05D003812 ORTHO05D004393 7.8e-98 362.1 432 42.6
HPP92_018576 Vanilla planifolia HOM05D003812 ORTHO05D004393 5.1e-97 359.4 587 41.9
Carub.0005s1565 Capsella rubella HOM05D003812 ORTHO05D004393 4.9e-92 342.8 277 66.4
AUR62023711 Chenopodium quinoa HOM05D003812 ORTHO05D004393 1.4e-91 341.3 462 43.7
Carub.0005s1566 Capsella rubella HOM05D003812 ORTHO05D004393 2.7e-90 337.0 239 68.6
Pp3c16_3240 Physcomitrium patens HOM05D003812 ORTHO05D004393 1.1e-86 325.1 439 39.0
Mapoly0019s0182 Marchantia polymorpha HOM05D003812 ORTHO05D004393 1.8e-86 324.3 450 38.2
SMO367G0920 Selaginella moellendorffii HOM05D003812 ORTHO05D004393 3.1e-86 323.6 429 41.5
MBI16_g29049_MAGBIO Magnolia biondii HOM05D003812 ORTHO05D004393 6.4e-84 315.8 472 42.2
vmacro06691 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 1.2e-82 311.6 502 36.9
Cc00_g24630 Coffea canephora HOM05D003812 ORTHO05D004393 7.4e-80 302.4 351 48.7
AUR62002481 Chenopodium quinoa HOM05D003812 ORTHO05D004393 2.8e-79 300.4 331 48.0
RcHm_v2.0_Chr2g0084521 Rosa chinensis HOM05D003812 ORTHO05D004393 1.1e-78 298.5 327 46.8
CDE05G0093 Ceratophyllum demersum HOM05D003812 ORTHO05D004393 2.4e-78 297.4 529 35.0
AagrBONN_evm.TU.Sc2ySwM_344.3654 Anthoceros agrestis HOM05D003812 ORTHO05D004393 2.6e-77 293.9 449 36.7
Nitab4.5_0000160g0140 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.6e-74 284.6 358 44.7
FAN23G1808 Fragaria x ananassa HOM05D003812 ORTHO05D004393 2.1e-74 284.3 338 45.0
Ah.13g073180 Amaranthus hybridus HOM05D003812 ORTHO05D004393 5.3e-70 269.6 256 50.0
Lalb_Chr05g0212031 Lupinus albus HOM05D003812 ORTHO05D004393 1.8e-62 244.6 304 42.8
Lalb_Chr05g0212041 Lupinus albus HOM05D003812 ORTHO05D004393 6.5e-60 236.1 235 51.9
Hma1.2p1_0381F.1_g140050 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 3.6e-58 230.3 238 51.7
Haze_11132 Corylus avellana HOM05D003812 ORTHO05D004393 5.9e-53 213.0 323 38.1
RcHm_v2.0_Chr2g0084531 Rosa chinensis HOM05D003812 ORTHO05D004393 6.5e-52 209.5 274 46.0
Sc13g0007550 Simmondsia chinensis HOM05D003812 ORTHO05D004393 1.4e-51 208.4 248 45.6
TAR636G0947 Trochodendron aralioides HOM05D003812 ORTHO05D004393 6.1e-50 203.0 270 44.8
Hma1.2p1_0381F.1_g140060 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 7.9e-50 202.6 158 58.9
Cc06_g19240 Coffea canephora HOM05D003812 ORTHO05D004393 4.4e-48 196.8 132 64.4
Hund12300 Selenicereus undatus HOM05D003812 ORTHO05D004393 5.9e-45 186.4 232 44.4
Cc06_g19250 Coffea canephora HOM05D003812 ORTHO05D004393 7.2e-43 179.5 233 45.5
Nitab4.5_0001168g0120 Nicotiana tabacum HOM05D003812 ORTHO05D004393 6.7e-41 172.9 308 35.4
ATR0580G406 Amborella trichopoda HOM05D003812 ORTHO05D004393 7.4e-40 169.5 238 42.4
TAR636G0254 Trochodendron aralioides HOM05D003812 ORTHO05D004393 3.5e-37 160.6 254 44.5
Oeu022463.3 Olea europaea HOM05D003812 ORTHO05D004393 8.5e-36 156.0 372 33.3
Ah.13g073190 Amaranthus hybridus HOM05D003812 ORTHO05D004393 4.2e-35 153.7 148 53.4
CBR_g26464 Chara braunii HOM05D003812 ORTHO05D004393 8.8e-33 146.0 629 22.7
HanXRQChr17g0553321 Helianthus annuus HOM05D003812 ORTHO05D004393 2.0e-29 134.8 229 39.3
BcaB07g31053 Brassica carinata HOM05D003812 ORTHO05D004393 3.5e-29 134.0 65 96.9
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 4.5e-29 133.7 185 42.7
Sc13g0007560 Simmondsia chinensis HOM05D003812 ORTHO05D004393 5.0e-28 130.2 100 60.0
CSS0030669 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.1e-26 124.8 164 40.2
Oeu064436.1 Olea europaea HOM05D003812 ORTHO05D004393 2.7e-26 124.4 180 40.0
CSS0023461 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 6.1e-26 123.2 183 38.8
CSS0048962 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 6.8e-25 119.8 183 38.3
CSS0001518 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 8.8e-25 119.4 183 38.3
CSS0002491 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 4.4e-24 117.1 182 39.6
CSS0006626 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 4.4e-24 117.1 182 39.6
CSS0008525 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 4.4e-24 117.1 182 39.6
VMungo1268G0001 Vigna mungo HOM05D003812 ORTHO05D004393 6.3e-23 113.2 177 38.4
ATR0580G030 Amborella trichopoda HOM05D003812 ORTHO05D004393 1.4e-22 112.1 247 31.6
arahy.Tifrunner.gnm1.ann1.NBB910 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.4e-22 112.1 103 52.4
Haze_11133 Corylus avellana HOM05D003812 ORTHO05D004393 1.8e-22 111.7 108 53.7
arahy.Tifrunner.gnm1.ann1.C22IND Arachis hypogaea HOM05D003812 ORTHO05D004393 5.4e-22 110.2 96 54.2
SHI01261 Sapria himalayana HOM05D003812 ORTHO05D004393 5.4e-22 110.2 125 44.0
arahy.Tifrunner.gnm1.ann1.WBRQ5K Arachis hypogaea HOM05D003812 ORTHO05D004393 1.2e-21 109.0 102 52.0
Hund12301 Selenicereus undatus HOM05D003812 ORTHO05D004393 1.9e-19 101.7 227 42.7
Os01g0528000 Oryza sativa ssp. japonica HOM05D003812 ORTHO05D004393 7.2e-19 99.8 125 41.6
arahy.Tifrunner.gnm1.ann1.05VQ85 Arachis hypogaea HOM05D003812 ORTHO05D004393 4.7e-18 97.1 82 54.9
SEGI_23375 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 1.0e-17 95.9 185 33.5
CSS0036967 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 8.9e-17 92.8 77 53.2
SEGI_01468 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 1.4e-14 85.5 69 52.2
arahy.Tifrunner.gnm1.ann1.8MB3N8 Arachis hypogaea HOM05D003812 ORTHO05D004393 7.8e-13 79.7 82 47.6
arahy.Tifrunner.gnm1.ann1.SF8VIF Arachis hypogaea HOM05D003812 ORTHO05D004393 8.6e-12 76.3 78 48.7
Nn1g08161 Nelumbo nucifera HOM05D003812 ORTHO05D004393 1.1e-11 75.9 183 44.8
BolC8t48198H Brassica oleracea HOM05D003812 ORTHO05D004393 9.5e-11 72.8 35 94.3
FAN20G1426 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.6e-10 72.0 94 47.9
vmacro06690 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 2.8e-10 71.2 43 72.1
FvH4_2g23680 Fragaria vesca HOM05D003812 ORTHO05D004393 2.0e-08 65.1 99 42.4
SEGI_03594 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 1.7e-07 62.0 44 65.9
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.1e-06 59.3 265 30.2
Cc00_g35850 Coffea canephora HOM05D003812 ORTHO05D004393 5.4e-06 57.0 53 52.8
Sc25g0002350 Simmondsia chinensis HOM05D003812 ORTHO05D004393 9.2e-06 56.2 47 55.3


User provided reference genes

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