Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p60110 Brassica napus HOM05D003381 ORTHO05D003880 5.3e-42 174.1 98 100.0
BcaC03g17951 Brassica carinata HOM05D003381 ORTHO05D003880 1.2e-41 172.9 98 99.0
BolC2t12066H Brassica oleracea HOM05D003381 ORTHO05D003880 1.2e-41 172.9 98 99.0
BraA02t08981Z Brassica rapa HOM05D003381 ORTHO05D003880 2.6e-41 171.8 98 98.0
Thhalv10005368m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 1.4e-34 149.4 100 87.0
Sp2g22730 Schrenkiella parvula HOM05D003381 ORTHO05D003880 1.4e-34 149.4 100 87.0
AT5G24660 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 2.6e-33 145.2 93 87.1
A06p35480 Brassica napus HOM05D003381 ORTHO05D003880 2.6e-33 145.2 100 85.0
BraA06t26471Z Brassica rapa HOM05D003381 ORTHO05D003880 2.6e-33 145.2 100 85.0
CARHR188800 Cardamine hirsuta HOM05D003381 ORTHO05D003880 2.6e-33 145.2 93 88.2
Carub.0006s2252 Capsella rubella HOM05D003381 ORTHO05D003880 7.7e-33 143.7 92 87.0
BcaNung02004 Brassica carinata HOM05D003381 ORTHO05D003880 1.7e-32 142.5 100 83.0
C07p43060 Brassica napus HOM05D003381 ORTHO05D003880 1.7e-32 142.5 100 83.0
BolC7t44833H Brassica oleracea HOM05D003381 ORTHO05D003880 1.7e-32 142.5 100 83.0
AL6G36270 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 6.5e-32 140.6 93 86.0
AT5G24655 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 1.2e-30 136.3 91 82.4
Aa31LG11G3910 Aethionema arabicum HOM05D003381 ORTHO05D003880 2.1e-30 135.6 89 83.1
Carub.0006s2251 Capsella rubella HOM05D003381 ORTHO05D003880 2.1e-30 135.6 95 83.2
AL6G36260 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 6.1e-30 134.0 91 82.4
AT3G49570 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 9.7e-28 126.7 89 76.4
AL5G29410 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 6.3e-27 124.0 89 75.3
Sp5g12540 Schrenkiella parvula HOM05D003381 ORTHO05D003880 6.3e-27 124.0 91 74.7
BolC8t50073H Brassica oleracea HOM05D003381 ORTHO05D003880 9.1e-26 120.2 89 75.3
Carub.0005s1590 Capsella rubella HOM05D003381 ORTHO05D003880 1.2e-25 119.8 90 72.2
BcaC07g39418 Brassica carinata HOM05D003381 ORTHO05D003880 4.5e-25 117.9 89 73.0
A06p18190 Brassica napus HOM05D003381 ORTHO05D003880 4.5e-25 117.9 89 73.0
BraA06t24903Z Brassica rapa HOM05D003381 ORTHO05D003880 4.5e-25 117.9 89 73.0
A02p40150 Brassica napus HOM05D003381 ORTHO05D003880 2.2e-24 115.5 66 95.5
CARHR158590 Cardamine hirsuta HOM05D003381 ORTHO05D003880 1.5e-23 112.8 91 68.1
Carub.0005s1591 Capsella rubella HOM05D003381 ORTHO05D003880 7.2e-23 110.5 91 67.0
Sp5g12530 Schrenkiella parvula HOM05D003381 ORTHO05D003880 7.2e-23 110.5 85 68.2
THA.LOC104798994 Tarenaya hassleriana HOM05D003381 ORTHO05D003880 7.2e-23 110.5 78 73.1
BcaC07g39419 Brassica carinata HOM05D003381 ORTHO05D003880 1.2e-22 109.8 91 67.0
Thhalv10010815m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 1.2e-22 109.8 85 71.8
C08p24550 Brassica napus HOM05D003381 ORTHO05D003880 1.0e-21 106.7 81 67.9
BolC8t50074H Brassica oleracea HOM05D003381 ORTHO05D003880 1.0e-21 106.7 81 67.9
CARHR158580 Cardamine hirsuta HOM05D003381 ORTHO05D003880 1.0e-21 106.7 89 67.4
BcaC07g39421 Brassica carinata HOM05D003381 ORTHO05D003880 1.4e-21 106.3 93 64.5
AL5G29420 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 1.8e-21 105.9 91 63.7
BcaB01g00694 Brassica carinata HOM05D003381 ORTHO05D003880 8.8e-21 103.6 85 64.7
A06p18160 Brassica napus HOM05D003381 ORTHO05D003880 8.8e-21 103.6 93 62.4
BcaC09g49963 Brassica carinata HOM05D003381 ORTHO05D003880 2.6e-17 92.0 61 78.7
Aa31LG4G18060 Aethionema arabicum HOM05D003381 ORTHO05D003880 5.9e-17 90.9 89 60.7
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 2.1e-14 82.4 78 60.3
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 3.6e-14 81.6 80 56.2
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 3.6e-14 81.6 80 56.2
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 8.8e-13 77.0 73 60.3
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 1.5e-12 76.3 99 48.5
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 2.6e-12 75.5 86 50.0
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 4.4e-12 74.7 112 41.1
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 5.7e-12 74.3 94 47.9
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 1.3e-11 73.2 83 53.0
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 2.8e-11 72.0 76 52.6
Psat5g070560 Pisum sativum HOM05D003381 ORTHO05D003880 3.7e-11 71.6 100 49.0
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 4.8e-11 71.2 98 48.0
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 4.8e-11 71.2 74 54.1
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 4.8e-11 71.2 98 48.0
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 6.3e-11 70.9 90 48.9
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 6.3e-11 70.9 94 45.7
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 8.3e-11 70.5 89 48.3
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 8.3e-11 70.5 104 43.3
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 8.3e-11 70.5 74 52.7
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 8.3e-11 70.5 74 52.7
AT3G49580 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 1.1e-10 70.1 58 63.8
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 1.4e-10 69.7 90 44.4
Lalb_Chr10g0102971 Lupinus albus HOM05D003381 ORTHO05D003880 2.4e-10 68.9 78 47.4
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 3.1e-10 68.6 90 45.6
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 4.1e-10 68.2 88 47.7
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 4.1e-10 68.2 84 47.6
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 5.4e-10 67.8 107 41.1
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 5.4e-10 67.8 82 47.6
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 7.0e-10 67.4 92 47.8
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 9.1e-10 67.0 88 45.5
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 9.1e-10 67.0 87 47.1
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 1.2e-09 66.6 89 48.3
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 1.2e-09 66.6 82 45.1
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.2e-09 66.6 77 48.1
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.2e-09 66.6 77 51.9
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 1.2e-09 66.6 77 51.9
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.0e-09 65.9 80 47.5
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 2.7e-09 65.5 89 50.6
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 2.7e-09 65.5 90 44.4
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 2.7e-09 65.5 89 42.7
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 4.5e-09 64.7 89 44.9
COL.COLO4_14402 Corchorus olitorius HOM05D003381 ORTHO05D003880 5.9e-09 64.3 55 58.2
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 5.9e-09 64.3 89 44.9
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 5.9e-09 64.3 89 44.9
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 7.7e-09 63.9 81 48.1
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 1.0e-08 63.5 84 46.4
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 1.3e-08 63.2 96 45.8
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 1.3e-08 63.2 69 49.3
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 1.3e-08 63.2 68 50.0
SGA_v2.0_scaffold351G49675 Striga asiatica HOM05D003381 ORTHO05D003880 1.3e-08 63.2 92 44.6
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 2.2e-08 62.4 84 45.2
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 2.2e-08 62.4 98 43.9
CANSAT21G0934 Cannabis sativa HOM05D003381 ORTHO05D003880 2.9e-08 62.0 82 41.5
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 2.9e-08 62.0 90 48.9
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 2.9e-08 62.0 76 48.7
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 3.8e-08 61.6 81 45.7
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 3.8e-08 61.6 85 45.9
CAN.G65.142 Capsicum annuum HOM05D003381 ORTHO05D003880 5.0e-08 61.2 63 54.0
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 5.0e-08 61.2 73 46.6
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 5.0e-08 61.2 95 45.3
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 5.0e-08 61.2 62 50.0
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 5.0e-08 61.2 86 47.7
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 6.5e-08 60.8 87 43.7
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 6.5e-08 60.8 83 41.0
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 6.5e-08 60.8 89 41.6
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 6.5e-08 60.8 87 47.1
Lsat_1_v5_gn_8_4301 Lactuca sativa HOM05D003381 ORTHO05D003880 8.5e-08 60.5 61 54.1
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 8.5e-08 60.5 87 47.1
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 8.5e-08 60.5 87 47.1
Haze_00337 Corylus avellana HOM05D003381 ORTHO05D003880 1.1e-07 60.1 88 43.2
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.1e-07 60.1 81 45.7
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.1e-07 60.1 81 45.7
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.1e-07 60.1 92 45.7
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 1.1e-07 60.1 87 43.7
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 1.9e-07 59.3 87 46.0
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 1.9e-07 59.3 87 43.7
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 2.5e-07 58.9 87 47.1
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 3.2e-07 58.5 73 47.9
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 3.2e-07 58.5 83 43.4
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 3.2e-07 58.5 97 43.3
Sc14g0006700 Simmondsia chinensis HOM05D003381 ORTHO05D003880 3.2e-07 58.5 74 47.3
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 4.2e-07 58.2 98 42.9
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 4.2e-07 58.2 87 44.8
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 4.2e-07 58.2 75 48.0
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 5.5e-07 57.8 74 45.9
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 5.5e-07 57.8 92 41.3
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 5.5e-07 57.8 80 45.0
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 5.5e-07 57.8 80 45.0
HanXRQChr16g0499781 Helianthus annuus HOM05D003381 ORTHO05D003880 5.5e-07 57.8 75 42.7
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 7.2e-07 57.4 78 44.9
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 9.4e-07 57.0 84 42.9
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 9.4e-07 57.0 78 41.0
SpUn0007_0020 Schrenkiella parvula HOM05D003381 ORTHO05D372657 9.4e-07 57.0 34 85.3
Zm00001eb231110 Zea mays HOM05D003381 ORTHO05D003880 9.4e-07 57.0 73 46.6
ECA232G1694 Erigeron canadensis HOM05D003381 ORTHO05D003880 1.2e-06 56.6 66 43.9
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 1.2e-06 56.6 97 40.2
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 1.6e-06 56.2 96 39.6
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 1.6e-06 56.2 80 46.2
Oeu055427.1 Olea europaea HOM05D003381 ORTHO05D003880 1.6e-06 56.2 67 49.3
SalBow4G1643 Salvia bowleyana HOM05D003381 ORTHO05D003880 1.6e-06 56.2 54 51.9
CiPaw.06G038100 Carya illinoinensis HOM05D003381 ORTHO05D003880 2.1e-06 55.8 52 57.7
PGR142G3642 Punica granatum HOM05D003381 ORTHO05D003880 2.1e-06 55.8 78 44.9
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 2.1e-06 55.8 77 48.1
EL10Ac3g05128 Beta vulgaris HOM05D003381 ORTHO05D003880 2.7e-06 55.5 79 44.3
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 2.7e-06 55.5 90 42.2
Migut.F00119 Erythranthe guttata HOM05D003381 ORTHO05D003880 3.6e-06 55.1 73 45.2
AUR62005945 Chenopodium quinoa HOM05D003381 ORTHO05D003880 4.7e-06 54.7 68 45.6
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 8.0e-06 53.9 88 38.6
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 8.0e-06 53.9 94 40.4
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 8.0e-06 53.9 94 40.4
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 8.0e-06 53.9 95 42.1


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