Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p60030 Brassica napus HOM05D008799 ORTHO05D010975 1.4e-89 333.2 202 100.0
BolC2t12057H Brassica oleracea HOM05D008799 ORTHO05D010975 4.7e-69 265.0 179 93.3
BcaC03g17942 Brassica carinata HOM05D008799 ORTHO05D010975 8.9e-60 234.2 151 98.0
BraA02t08970Z Brassica rapa HOM05D008799 ORTHO05D010975 3.7e-50 202.2 184 70.1
A02p40060 Brassica napus HOM05D008799 ORTHO05D010975 1.9e-49 199.9 184 71.2
A06p35660 Brassica napus HOM05D008799 ORTHO05D010975 1.3e-37 160.6 186 61.8
Sp2g22570 Schrenkiella parvula HOM05D008799 ORTHO05D010975 5.3e-36 155.2 187 57.8
C07p42890 Brassica napus HOM05D008799 ORTHO05D010975 9.0e-36 154.5 131 71.0
BolC7t44817H Brassica oleracea HOM05D008799 ORTHO05D010975 9.0e-36 154.5 131 71.0
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 9.0e-36 154.5 129 71.3
BraA06t26491Z Brassica rapa HOM05D008799 ORTHO05D010975 1.2e-35 154.1 136 69.9
BcaNung05897 Brassica carinata HOM05D008799 ORTHO05D010975 1.5e-35 153.7 122 74.6
AL6G36554 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 1.5e-27 127.1 196 57.7
CARHR188570 Cardamine hirsuta HOM05D008799 ORTHO05D010975 2.2e-26 123.2 140 62.1
AT5G24880 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 8.4e-26 121.3 134 62.7
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 1.1e-09 67.8 127 47.2
A10p26930 Brassica napus HOM05D008799 ORTHO05D010975 3.5e-08 62.8 122 46.7
BraA10t44744Z Brassica rapa HOM05D008799 ORTHO05D010975 3.5e-08 62.8 122 46.7
BcaB08g37100 Brassica carinata HOM05D008799 ORTHO05D010975 1.0e-07 61.2 121 47.1
C09p66120 Brassica napus HOM05D008799 ORTHO05D010975 1.8e-07 60.5 122 46.7
BolC9t59432H Brassica oleracea HOM05D008799 ORTHO05D010975 1.8e-07 60.5 122 46.7
C03p05400 Brassica napus HOM05D008799 ORTHO05D010975 5.1e-07 58.9 128 44.5
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 5.1e-07 58.9 128 44.5
BcaB01g05508 Brassica carinata HOM05D008799 ORTHO05D010975 8.7e-07 58.2 128 43.8
BcaB01g06270 Brassica carinata HOM05D008799 ORTHO05D010975 8.7e-07 58.2 122 47.5
BcaC04g19292 Brassica carinata HOM05D008799 ORTHO05D010975 1.1e-06 57.8 122 45.1


User provided reference genes

Program Settings