Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17937 Brassica carinata HOM05D004743 ORTHO05D005698 6.4e-54 213.8 104 100.0
C02p59940 Brassica napus HOM05D004743 ORTHO05D005698 6.4e-54 213.8 104 100.0
BcaB06g29229 Brassica carinata HOM05D004743 ORTHO05D005698 2.3e-27 125.6 103 69.9
BcaC02g12469 Brassica carinata HOM05D004743 ORTHO05D005698 2.3e-27 125.6 103 69.9
BcaNung04402 Brassica carinata HOM05D004743 ORTHO05D005698 2.3e-27 125.6 103 69.9
A05p02780 Brassica napus HOM05D004743 ORTHO05D005698 2.3e-27 125.6 103 69.9
C04p03370 Brassica napus HOM05D004743 ORTHO05D005698 2.3e-27 125.6 103 69.9
BolC4t21974H Brassica oleracea HOM05D004743 ORTHO05D005698 2.3e-27 125.6 103 69.9
BraA05t19270Z Brassica rapa HOM05D004743 ORTHO05D005698 2.3e-27 125.6 103 69.9
A04p32050 Brassica napus HOM05D004743 ORTHO05D005698 8.7e-27 123.6 103 68.9
BcaC02g07257 Brassica carinata HOM05D004743 ORTHO05D005698 1.1e-26 123.2 103 68.9
C04p69570 Brassica napus HOM05D004743 ORTHO05D005698 1.1e-26 123.2 103 68.9
BolC4t28455H Brassica oleracea HOM05D004743 ORTHO05D005698 1.1e-26 123.2 103 68.9
BraA04t18662Z Brassica rapa HOM05D004743 ORTHO05D005698 1.9e-26 122.5 103 68.0
Sp4g24390 Schrenkiella parvula HOM05D004743 ORTHO05D005698 2.5e-26 122.1 101 69.3
CARHR137250 Cardamine hirsuta HOM05D004743 ORTHO05D005698 3.3e-26 121.7 101 69.3
AT2G42210 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 7.4e-26 120.6 101 68.3
AL4G40570 Arabidopsis lyrata HOM05D004743 ORTHO05D005698 3.7e-25 118.2 101 67.3
Thhalv10017352m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 8.2e-25 117.1 101 66.3
Carub.0004s2455 Capsella rubella HOM05D004743 ORTHO05D005698 1.8e-24 115.9 101 66.3
Thhalv10006285m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 2.4e-24 115.5 101 65.3
Sp5g04820 Schrenkiella parvula HOM05D004743 ORTHO05D005698 2.4e-24 115.5 101 65.3
Aa31LG1G24060 Aethionema arabicum HOM05D004743 ORTHO05D005698 3.1e-24 115.2 101 64.4
Aa31LG10G12610 Aethionema arabicum HOM05D004743 ORTHO05D005698 5.3e-24 114.4 101 64.4
THA.LOC104824464 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.5e-23 112.8 101 63.4
Rhsim03G0009100 Rhododendron simsii HOM05D004743 ORTHO05D005698 7.6e-23 110.5 101 59.4
EL10Ac3g06947 Beta vulgaris HOM05D004743 ORTHO05D005698 1.0e-22 110.2 101 60.4
Lju124A30G9 Lonicera japonica HOM05D004743 ORTHO05D005698 2.2e-22 109.0 101 58.4
FvH4_6g22680 Fragaria vesca HOM05D004743 ORTHO05D005698 2.9e-22 108.6 101 59.4
FAN02G0944 Fragaria x ananassa HOM05D004743 ORTHO05D005698 2.9e-22 108.6 101 59.4
FAN05G2002 Fragaria x ananassa HOM05D004743 ORTHO05D005698 2.9e-22 108.6 101 59.4
FAN09G0554 Fragaria x ananassa HOM05D004743 ORTHO05D005698 2.9e-22 108.6 101 59.4
FAN14G2026 Fragaria x ananassa HOM05D004743 ORTHO05D005698 2.9e-22 108.6 101 59.4
FAN14G4474 Fragaria x ananassa HOM05D004743 ORTHO05D005698 2.9e-22 108.6 101 59.4
RcHm_v2.0_Chr3g0480261 Rosa chinensis HOM05D004743 ORTHO05D005698 5.0e-22 107.8 101 58.4
vmacro07935 Vaccinium macrocarpon HOM05D004743 ORTHO05D005698 6.5e-22 107.5 101 58.4
CDE07G0719 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 8.4e-22 107.1 101 58.4
Sc13g0002130 Simmondsia chinensis HOM05D004743 ORTHO05D005698 8.4e-22 107.1 101 58.4
Haze_19962 Corylus avellana HOM05D004743 ORTHO05D005698 1.1e-21 106.7 101 58.4
CDE04G2796 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 1.4e-21 106.3 101 57.4
AUR62012065 Chenopodium quinoa HOM05D004743 ORTHO05D005698 1.4e-21 106.3 101 57.4
AUR62024326 Chenopodium quinoa HOM05D004743 ORTHO05D005698 1.4e-21 106.3 101 57.4
Sed0004669 Sechium edule HOM05D004743 ORTHO05D005698 1.9e-21 105.9 101 60.4
Prupe.7G073800 Prunus persica HOM05D004743 ORTHO05D005698 2.5e-21 105.5 101 57.4
MD14G1060700 Malus domestica HOM05D004743 ORTHO05D005698 3.2e-21 105.1 101 58.4
CSS0027207 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 4.2e-21 104.8 101 57.4
CSS0048559 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 4.2e-21 104.8 101 57.4
ECA247G0571 Erigeron canadensis HOM05D004743 ORTHO05D005698 4.2e-21 104.8 101 58.4
Thecc.05G168500 Theobroma cacao HOM05D004743 ORTHO05D005698 4.2e-21 104.8 101 57.4
TAR623G0239 Trochodendron aralioides HOM05D004743 ORTHO05D005698 4.2e-21 104.8 101 56.4
Ah.13g076070 Amaranthus hybridus HOM05D004743 ORTHO05D005698 5.5e-21 104.4 101 57.4
MSTRG.19893 Avicennia marina HOM05D004743 ORTHO05D005698 5.5e-21 104.4 101 58.4
Dinv14277 Davidia involucrata HOM05D004743 ORTHO05D005698 7.2e-21 104.0 101 55.4
MD12G1061000 Malus domestica HOM05D004743 ORTHO05D005698 7.2e-21 104.0 101 57.4
PSO339G6088 Papaver somniferum HOM05D004743 ORTHO05D005698 9.3e-21 103.6 101 57.4
PSO384G3106 Papaver somniferum HOM05D004743 ORTHO05D005698 9.3e-21 103.6 101 57.4
Sed0015240 Sechium edule HOM05D004743 ORTHO05D005698 9.3e-21 103.6 101 58.4
Hund19191 Selenicereus undatus HOM05D004743 ORTHO05D005698 9.3e-21 103.6 101 56.4
CiPaw.10G028000 Carya illinoinensis HOM05D004743 ORTHO05D005698 1.2e-20 103.2 101 56.4
HanXRQChr10g0295691 Helianthus annuus HOM05D004743 ORTHO05D005698 1.2e-20 103.2 101 56.4
Sopen10g029310 Solanum pennellii HOM05D004743 ORTHO05D005698 1.2e-20 103.2 101 57.4
TAR633G2476 Trochodendron aralioides HOM05D004743 ORTHO05D005698 1.2e-20 103.2 101 54.5
Lsat_1_v5_gn_9_28001 Lactuca sativa HOM05D004743 ORTHO05D005698 1.6e-20 102.8 101 56.4
Solyc10g078690.3 Solanum lycopersicum HOM05D004743 ORTHO05D005698 1.6e-20 102.8 101 57.4
PGSC0003DMG400011432 Solanum tuberosum HOM05D004743 ORTHO05D005698 1.6e-20 102.8 101 57.4
CANSAT64G2667 Cannabis sativa HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 57.4
Cc00_g14600 Coffea canephora HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 54.5
Cc06_g22060 Coffea canephora HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 54.5
COL.COLO4_36134 Corchorus olitorius HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 58.4
Gohir.A01G192000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 56.4
Gohir.D01G178000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 56.4
Gorai.002G225100 Gossypium raimondii HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 56.4
Hma1.2p1_0005F.1_g004310 Hydrangea macrophylla HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 56.4
MBI04_g27127_MAGBIO Magnolia biondii HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 56.4
TAR633G1605 Trochodendron aralioides HOM05D004743 ORTHO05D005698 2.1e-20 102.4 101 54.5
DCAR_013558 Daucus carota HOM05D004743 ORTHO05D005698 2.7e-20 102.1 101 58.4
Ciclev10012973m.g Citrus clementina HOM05D004743 ORTHO05D005698 3.5e-20 101.7 101 55.4
Actinidia09383 Actinidia chinensis HOM05D000570 ORTHO05D005344 4.6e-20 101.3 101 55.4
Gohir.A09G126700 Gossypium hirsutum HOM05D004743 ORTHO05D005698 7.9e-20 100.5 101 55.4
Gorai.006G141500 Gossypium raimondii HOM05D004743 ORTHO05D005698 7.9e-20 100.5 101 55.4
HanXRQChr15g0491311 Helianthus annuus HOM05D004743 ORTHO05D005698 7.9e-20 100.5 101 55.4
Oeu033746.1 Olea europaea HOM05D004743 ORTHO05D005698 7.9e-20 100.5 101 54.5
SGA_v2.0_scaffold69G23079 Striga asiatica HOM05D004743 ORTHO05D005698 7.9e-20 100.5 101 55.4
Potri.006G059300 Populus trichocarpa HOM05D004743 ORTHO05D005698 1.0e-19 100.1 101 55.4
MELO3C009644.2 Cucumis melo HOM05D004743 ORTHO05D005698 1.3e-19 99.8 101 54.5
Gohir.D09G123248 Gossypium hirsutum HOM05D004743 ORTHO05D005698 1.8e-19 99.4 101 54.5
Manes.08G045000 Manihot esculenta HOM05D004743 ORTHO05D005698 1.8e-19 99.4 101 54.5
Manes.09G032100 Manihot esculenta HOM05D004743 ORTHO05D005698 1.8e-19 99.4 101 55.4
PGR142G2650 Punica granatum HOM05D004743 ORTHO05D005698 1.8e-19 99.4 101 55.4
ATR0605G135 Amborella trichopoda HOM05D004743 ORTHO05D005698 3.0e-19 98.6 101 51.5
Aqoxy2G00062 Aquilegia oxysepala HOM05D004743 ORTHO05D005698 3.9e-19 98.2 101 54.5
Duzib106G0699 Durio zibethinus HOM05D004743 ORTHO05D005698 3.9e-19 98.2 101 54.5
Cpa.g.sc85.89 Carica papaya HOM05D004743 ORTHO05D005698 5.1e-19 97.8 101 53.5
Nitab4.5_0001538g0070 Nicotiana tabacum HOM05D004743 ORTHO05D005698 5.1e-19 97.8 101 56.4
CsaV3_3G039010 Cucumis sativus L. HOM05D004743 ORTHO05D005698 6.7e-19 97.4 101 52.5
CiPaw.09G032100 Carya illinoinensis HOM05D004743 ORTHO05D005698 8.7e-19 97.1 101 54.5
Eucgr.A02439 Eucalyptus grandis HOM05D004743 ORTHO05D005698 8.7e-19 97.1 104 52.9
Peaxi162Scf00003g04210 Petunia axillaris HOM05D004743 ORTHO05D005698 1.1e-18 96.7 101 53.5
THA.LOC104802456 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.1e-18 96.7 93 59.1
CAN.G1161.21 Capsicum annuum HOM05D004743 ORTHO05D005698 1.9e-18 95.9 101 54.5
Nitab4.5_0000991g0030 Nicotiana tabacum HOM05D004743 ORTHO05D005698 2.5e-18 95.5 101 54.5
GSVIVG01033524001 Vitis vinifera HOM05D004743 ORTHO05D005698 4.3e-18 94.7 101 52.5
Sabra06G0042700 Salix brachista HOM05D004743 ORTHO05D005698 5.7e-18 94.4 140 43.6
Migut.J01816 Erythranthe guttata HOM05D004743 ORTHO05D005698 3.7e-17 91.7 101 51.5
Duzib128G1008 Durio zibethinus HOM05D004743 ORTHO05D005698 6.3e-17 90.9 101 52.5
unitig_749.g14140 Utricularia gibba HOM05D004743 ORTHO05D005698 1.8e-16 89.4 101 47.5
Glyma.19G145900 Glycine max HOM05D004743 ORTHO05D005698 4.1e-16 88.2 101 51.5
Glyma.03G142900 Glycine max HOM05D004743 ORTHO05D005698 6.9e-16 87.4 101 51.5
Lalb_Chr18g0047741 Lupinus albus HOM05D004743 ORTHO05D005698 9.0e-16 87.0 101 50.5
TWI77G0677 Tripterygium wilfordii HOM05D004743 ORTHO05D005698 9.0e-16 87.0 100 49.0
ClCG10G017380 Citrullus lanatus HOM05D004743 ORTHO05D005698 1.5e-15 86.3 181 35.9
Lj1g0027895 Lotus japonicus HOM05D004743 ORTHO05D005344 1.5e-15 86.3 101 49.5
Ca_08506_v3 Cicer arietinum L. HOM05D004743 ORTHO05D005698 2.0e-15 85.9 101 50.5
SEGI_22128 Sequoiadendron giganteum HOM05D004743 ORTHO05D005698 3.4e-15 85.1 103 45.6
HPP92_001833 Vanilla planifolia HOM05D004743 ORTHO05D005698 3.4e-15 85.1 101 48.5
VMungo1383G0120 Vigna mungo HOM05D004743 ORTHO05D005698 3.4e-15 85.1 101 50.5
Lalb_Chr04g0259631 Lupinus albus HOM05D004743 ORTHO05D005698 7.7e-15 84.0 101 49.5
Psat3g069720 Pisum sativum HOM05D004743 ORTHO05D005698 1.0e-14 83.6 101 51.5
Os02g0717300 Oryza sativa ssp. japonica HOM05D004743 ORTHO05D005698 1.7e-14 82.8 101 46.5
arahy.Tifrunner.gnm1.ann1.2GY28N Arachis hypogaea HOM05D000570 ORTHO05D005344 2.9e-14 82.0 101 50.5
arahy.Tifrunner.gnm1.ann1.CB7VX4 Arachis hypogaea HOM05D004743 ORTHO05D005344 2.9e-14 82.0 101 50.5
Zm00001eb252780 Zea mays HOM05D004743 ORTHO05D005698 2.9e-14 82.0 101 47.5
unitig_26.g9039 Utricularia gibba HOM05D004743 ORTHO05D005698 3.8e-14 81.6 144 38.2
Phvul.001G140800 Phaseolus vulgaris HOM05D004743 ORTHO05D005698 5.0e-14 81.3 101 48.5
Cfa016899 Carpinus fangiana HOM05D006381 ORTHO05D008523 8.5e-14 80.5 84 54.8
Atru.chr8.1050 Acer truncatum HOM05D004743 ORTHO05D005698 1.9e-13 79.3 76 56.6
TWI53G0547 Tripterygium wilfordii HOM05D004743 ORTHO05D005698 2.5e-13 79.0 102 44.1
C04p16200 Brassica napus HOM05D004743 ORTHO05D005698 2.7e-12 75.5 102 46.1
Nn7g36049 Nelumbo nucifera HOM05D004743 ORTHO05D005698 3.0e-11 72.0 72 56.9
QL07p023149 Quercus lobata HOM05D004743 ORTHO05D005698 1.3e-09 66.6 39 76.9
TPR.G13232 Trifolium pratense HOM05D004743 ORTHO05D005698 1.1e-08 63.5 39 74.4
Oeu008114.1 Olea europaea HOM05D004743 ORTHO05D005698 2.4e-08 62.4 39 69.2
C04p16220 Brassica napus HOM05D004743 ORTHO05D005698 3.1e-08 62.0 34 85.3
SalBow6G0397 Salvia bowleyana HOM05D004743 ORTHO05D005698 6.9e-08 60.8 104 34.6
Mapoly0011s0060 Marchantia polymorpha HOM05D004743 ORTHO05D005698 4.5e-07 58.2 100 35.0
THA.LOC104824466 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 4.5e-07 58.2 74 45.9
AagrBONN_evm.TU.Sc2ySwM_362.1495 Anthoceros agrestis HOM05D004743 ORTHO05D005698 1.3e-06 56.6 98 34.7
arahy.Tifrunner.gnm1.ann1.JW2HXV Arachis hypogaea HOM05D004743 ORTHO05D005698 1.3e-06 56.6 39 66.7
Hund19190 Selenicereus undatus HOM05D004743 ORTHO05D005698 1.3e-06 56.6 100 42.0
arahy.Tifrunner.gnm1.ann1.1ZE97X Arachis hypogaea HOM05D004743 ORTHO05D005698 1.7e-06 56.2 39 66.7
arahy.Tifrunner.gnm1.ann1.MK9Y65 Arachis hypogaea HOM05D004743 ORTHO05D005698 1.7e-06 56.2 39 66.7
arahy.Tifrunner.gnm1.ann1.W4Y9B5 Arachis hypogaea HOM05D004743 ORTHO05D005698 1.7e-06 56.2 39 66.7
arahy.Tifrunner.gnm1.ann1.GN7FJD Arachis hypogaea HOM05D004743 ORTHO05D005698 2.9e-06 55.5 38 65.8
arahy.Tifrunner.gnm1.ann1.YRY7W4 Arachis hypogaea HOM05D004743 ORTHO05D005698 3.8e-06 55.1 38 65.8
Pp3c6_9862 Physcomitrium patens HOM05D004743 ORTHO05D005698 6.5e-06 54.3 100 34.0


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