Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p59450 Brassica napus HOM05D004036 ORTHO05D004576 4.7e-77 291.2 156 100.0
A02p39670 Brassica napus HOM05D004036 ORTHO05D004576 2.8e-69 265.4 156 92.9
BraA02t08932Z Brassica rapa HOM05D004036 ORTHO05D004576 2.8e-69 265.4 156 92.9
BolC2t12008H Brassica oleracea HOM05D004036 ORTHO05D004576 1.3e-58 229.9 157 82.8
BcaNung07259 Brassica carinata HOM05D000175 ORTHO05D000481 7.9e-56 220.7 159 79.2
BcaB07g29991 Brassica carinata HOM05D004036 ORTHO05D004576 1.3e-42 176.8 164 64.6
C07p42280 Brassica napus HOM05D004036 ORTHO05D004576 2.9e-42 175.6 175 62.9
BolC7t44757H Brassica oleracea HOM05D004036 ORTHO05D004576 3.2e-41 172.2 173 62.4
Sp2g22000 Schrenkiella parvula HOM05D004036 ORTHO05D004576 7.1e-41 171.0 162 63.0
A06p36250 Brassica napus HOM05D004036 ORTHO05D004576 4.6e-40 168.3 171 62.0
BraA06t26547Z Brassica rapa HOM05D004036 ORTHO05D004576 4.6e-40 168.3 171 62.0
Thhalv10004997m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 1.4e-36 156.8 177 57.1
CARHR187840 Cardamine hirsuta HOM05D004036 ORTHO05D004576 2.0e-30 136.3 150 56.7
BcaB04g19786 Brassica carinata HOM05D004036 ORTHO05D004576 1.3e-29 133.7 140 60.7
Carub.0006s2340 Capsella rubella HOM05D004036 ORTHO05D004576 6.3e-29 131.3 184 52.7
AL6G37340 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 1.4e-28 130.2 180 52.8
C09p06800 Brassica napus HOM05D004036 ORTHO05D004576 4.1e-28 128.6 153 58.8
BolC9t53601H Brassica oleracea HOM05D004036 ORTHO05D004576 4.1e-28 128.6 153 58.8
AT5G25540 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 4.5e-27 125.2 176 50.6
Aa31LG11G4630 Aethionema arabicum HOM05D004036 ORTHO05D004576 2.9e-26 122.5 181 47.0
AT5G11440 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 3.2e-25 119.0 158 53.8
AL6G22100 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 1.4e-23 113.6 168 50.6
Aa31LG3G15750 Aethionema arabicum HOM05D004036 ORTHO05D004576 1.8e-23 113.2 178 46.1
BcaC03g13367 Brassica carinata HOM05D004036 ORTHO05D004576 2.3e-23 112.8 152 52.0
C07p03200 Brassica napus HOM05D004036 ORTHO05D004576 2.3e-23 112.8 110 60.9
Thhalv10014836m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 3.9e-23 112.1 171 48.0
BolC7t40715H Brassica oleracea HOM05D004036 ORTHO05D004576 5.7e-22 108.2 106 61.3
BcaB01g06306 Brassica carinata HOM05D004036 ORTHO05D004576 1.3e-21 107.1 166 48.8
C09p65420 Brassica napus HOM05D004036 ORTHO05D004576 1.3e-21 107.1 170 48.2
BolC9t59367H Brassica oleracea HOM05D004036 ORTHO05D004576 1.3e-21 107.1 170 48.2
CARHR201790 Cardamine hirsuta HOM05D004036 ORTHO05D004576 1.3e-21 107.1 174 46.0
Carub.0006s0989 Capsella rubella HOM05D004036 ORTHO05D004576 2.2e-21 106.3 162 50.6
BcaC04g19226 Brassica carinata HOM05D004036 ORTHO05D004576 2.8e-21 105.9 170 48.2
BcaNung01927 Brassica carinata HOM05D004036 ORTHO05D004576 2.8e-21 105.9 161 50.9
A02p01010 Brassica napus HOM05D004036 ORTHO05D004576 2.8e-21 105.9 153 49.7
A10p26310 Brassica napus HOM05D004036 ORTHO05D004576 2.8e-21 105.9 170 47.6
BraA02t05082Z Brassica rapa HOM05D004036 ORTHO05D004576 2.8e-21 105.9 153 49.7
BcaC09g50856 Brassica carinata HOM05D004036 ORTHO05D004576 3.7e-21 105.5 109 59.6
Sp6g32160 Schrenkiella parvula HOM05D004036 ORTHO05D004576 3.7e-21 105.5 172 50.0
C01p19860 Brassica napus HOM05D004036 ORTHO05D004576 1.2e-19 100.5 105 57.1
BolC1t01914H Brassica oleracea HOM05D004036 ORTHO05D004576 1.2e-19 100.5 105 57.1
A03p05000 Brassica napus HOM05D004036 ORTHO05D004576 2.0e-19 99.8 167 44.3
BolC3t13087H Brassica oleracea HOM05D004036 ORTHO05D004576 3.5e-19 99.0 167 43.7
BcaB01g05484 Brassica carinata HOM05D004036 ORTHO05D004576 4.5e-19 98.6 167 43.7
C02p05040 Brassica napus HOM05D004036 ORTHO05D004576 5.9e-19 98.2 152 46.7
BraA10t44688Z Brassica rapa HOM05D004036 ORTHO05D004576 7.7e-19 97.8 174 44.3
BcaB08g37059 Brassica carinata HOM05D004036 ORTHO05D004576 1.0e-18 97.4 172 43.6
C03p05740 Brassica napus HOM05D004036 ORTHO05D004576 2.9e-18 95.9 167 43.1
THA.LOC104799217 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 3.8e-18 95.5 111 55.9
Ciclev10009480m.g Citrus clementina HOM05D004036 ORTHO05D004576 3.2e-17 92.4 196 37.2
Gohir.D01G158400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.2e-17 92.4 163 39.9
THA.LOC104815044 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 3.2e-17 92.4 170 39.4
Gohir.D05G011350 Gossypium hirsutum HOM05D004036 ORTHO05D004576 9.4e-17 90.9 155 41.3
Gorai.009G011700 Gossypium raimondii HOM05D004036 ORTHO05D004576 4.7e-16 88.6 179 34.6
Gohir.D09G023175 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.0e-15 87.4 179 35.2
Gohir.A12G241700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.4e-15 87.0 179 34.6
Gohir.A05G010600 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.8e-15 86.7 179 35.8
Gohir.A12G126300 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.8e-15 86.7 179 35.2
Gohir.D09G022200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.3e-15 86.3 184 35.9
Gorai.008G052900 Gossypium raimondii HOM05D004036 ORTHO05D004576 2.3e-15 86.3 172 36.0
VMungo0647G1622 Vigna mungo HOM05D004036 ORTHO05D004576 3.0e-15 85.9 190 34.7
Gohir.A11G185400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.9e-15 85.5 179 34.6
Gohir.D05G335100 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.9e-15 85.5 179 35.2
Gohir.D12G195700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.9e-15 85.5 184 36.4
TPR.G20095 Trifolium pratense HOM05D004036 ORTHO05D004576 3.9e-15 85.5 179 36.9
Duzib150G0431 Durio zibethinus HOM05D004036 ORTHO05D004576 5.2e-15 85.1 192 36.5
TWI63G0992 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 5.2e-15 85.1 183 36.1
FAN20G2367 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.1e-14 84.0 191 36.6
Duzib187G1985 Durio zibethinus HOM05D004036 ORTHO05D004576 2.0e-14 83.2 194 33.0
FvH4_2g30160 Fragaria vesca HOM05D004036 ORTHO05D004576 2.0e-14 83.2 191 36.1
FAN24G0425 Fragaria x ananassa HOM05D004036 ORTHO05D004576 2.0e-14 83.2 191 36.1
CiPaw.08G015700 Carya illinoinensis HOM05D004036 ORTHO05D004576 2.6e-14 82.8 74 56.8
COL.COLO4_24066 Corchorus olitorius HOM05D004036 ORTHO05D004576 2.6e-14 82.8 193 34.7
Gorai.004G151900 Gossypium raimondii HOM05D004036 ORTHO05D004576 3.3e-14 82.4 179 34.1
Lj5g0012132 Lotus japonicus HOM05D004036 ORTHO05D004576 3.3e-14 82.4 173 37.0
Glyma.17G203900 Glycine max HOM05D004036 ORTHO05D004576 4.4e-14 82.0 195 34.9
Psat6g031000 Pisum sativum HOM05D004036 ORTHO05D004576 4.4e-14 82.0 182 35.2
Gohir.D06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 5.7e-14 81.6 194 34.5
RcHm_v2.0_Chr6g0312751 Rosa chinensis HOM05D004036 ORTHO05D004576 7.4e-14 81.3 189 33.9
Atru.chr7.2325 Acer truncatum HOM05D004036 ORTHO05D004576 9.7e-14 80.9 197 35.5
Cpa.g.sc91.6 Carica papaya HOM05D004036 ORTHO05D004576 1.3e-13 80.5 95 51.6
FAN15G1681 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.3e-13 80.5 191 35.6
FAN27G0504 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.3e-13 80.5 191 34.6
Medtr1g011280 Medicago truncatula HOM05D004036 ORTHO05D004576 1.3e-13 80.5 178 35.4
Prupe.1G466700 Prunus persica HOM05D004036 ORTHO05D004576 2.2e-13 79.7 186 34.4
Phvul.001G055700 Phaseolus vulgaris HOM05D004036 ORTHO05D004576 2.8e-13 79.3 192 33.9
Glyma.14G129200 Glycine max HOM05D004036 ORTHO05D004576 3.7e-13 79.0 193 31.6
CANSAT56G2568 Cannabis sativa HOM05D004036 ORTHO05D004576 4.8e-13 78.6 176 36.9
Cfa013210 Carpinus fangiana HOM05D004036 ORTHO05D004576 4.8e-13 78.6 189 34.9
Manes.16G068200 Manihot esculenta HOM05D004036 ORTHO05D004576 4.8e-13 78.6 192 36.5
Thecc.09G144100 Theobroma cacao HOM05D004036 ORTHO05D004576 6.3e-13 78.2 198 33.8
Oeu045176.1 Olea europaea HOM05D004036 ORTHO05D004576 8.2e-13 77.8 99 51.5
MSTRG.14001 Avicennia marina HOM05D004036 ORTHO05D004576 1.4e-12 77.0 185 32.4
Gohir.A06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.4e-12 77.0 194 33.5
Peaxi162Scf00105g01426 Petunia axillaris HOM05D004036 ORTHO05D004576 2.4e-12 76.3 194 35.1
QL12p031289 Quercus lobata HOM05D004036 ORTHO05D004576 3.1e-12 75.9 164 33.5
Hma1.2p1_0003F.1_g003650 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 4.1e-12 75.5 180 35.0
Eucgr.C01818 Eucalyptus grandis HOM05D004036 ORTHO05D004576 7.0e-12 74.7 194 35.1
Hma1.2p1_0175F.1_g077210 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 7.0e-12 74.7 174 31.6
DCAR_003061 Daucus carota HOM05D004036 ORTHO05D004576 9.1e-12 74.3 192 31.8
Nitab4.5_0006579g0060 Nicotiana tabacum HOM05D004036 ORTHO05D004576 9.1e-12 74.3 192 34.4
Manes.03G064800 Manihot esculenta HOM05D004036 ORTHO05D004576 1.2e-11 73.9 195 33.3
PGR031G0366 Punica granatum HOM05D004036 ORTHO05D004576 1.2e-11 73.9 189 32.8
TWI34G1922 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 1.6e-11 73.6 171 33.9
Lalb_Chr23g0269031 Lupinus albus HOM05D004036 ORTHO05D004576 4.5e-11 72.0 134 41.8
Nitab4.5_0000125g0270 Nicotiana tabacum HOM05D004036 ORTHO05D004576 4.5e-11 72.0 192 33.9
TAR624G0048 Trochodendron aralioides HOM05D004036 ORTHO05D004576 5.9e-11 71.6 107 40.2
Aqoxy7G01846 Aquilegia oxysepala HOM05D004036 ORTHO05D004576 7.7e-11 71.2 144 38.9
Lsat_1_v5_gn_3_108141 Lactuca sativa HOM05D004036 ORTHO05D004576 7.7e-11 71.2 148 33.1
Potri.006G246600 Populus trichocarpa HOM05D004036 ORTHO05D004576 7.7e-11 71.2 189 36.0
CAN.G21.9 Capsicum annuum HOM05D004036 ORTHO05D004576 1.0e-10 70.9 166 36.7
Lalb_Chr08g0243781 Lupinus albus HOM05D004036 ORTHO05D004576 1.0e-10 70.9 161 38.5
Dinv35883 Davidia involucrata HOM05D004036 ORTHO05D004576 1.3e-10 70.5 138 37.7
SGA_v2.0_scaffold163G38098 Striga asiatica HOM05D004036 ORTHO05D004576 1.3e-10 70.5 197 31.5
SalBow8G4507 Salvia bowleyana HOM05D004036 ORTHO05D004576 1.7e-10 70.1 122 42.6
SalBow8G4816 Salvia bowleyana HOM05D004036 ORTHO05D004576 1.7e-10 70.1 122 42.6
arahy.Tifrunner.gnm1.ann1.7NC9IZ Arachis hypogaea HOM05D004036 ORTHO05D004576 2.2e-10 69.7 178 37.1
Cc08_g08300 Coffea canephora HOM05D004036 ORTHO05D004576 2.2e-10 69.7 98 46.9
BraA08t33004Z Brassica rapa HOM05D004036 ORTHO05D004576 3.8e-10 68.9 50 74.0
arahy.Tifrunner.gnm1.ann1.AAJ54F Arachis hypogaea HOM05D004036 ORTHO05D004576 6.5e-10 68.2 178 36.5
Sabra18G0035300 Salix brachista HOM05D004036 ORTHO05D004576 1.1e-09 67.4 101 44.6
Sopen08g021750 Solanum pennellii HOM05D004036 ORTHO05D004576 1.5e-09 67.0 166 35.5
Gohir.A07G032200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.9e-09 66.6 129 36.4
Gohir.A08G237500 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.9e-09 66.6 129 36.4
MD08G1136600 Malus domestica HOM05D004036 ORTHO05D004576 4.2e-09 65.5 82 51.2
Solyc08g067810.3 Solanum lycopersicum HOM05D004036 ORTHO05D004576 5.5e-09 65.1 168 33.3
Migut.E01501 Erythranthe guttata HOM05D004036 ORTHO05D004576 7.2e-09 64.7 96 43.8
MSTRG.1647 Avicennia marina HOM05D004036 ORTHO05D004576 9.4e-09 64.3 116 39.7
ClCG05G017210 Citrullus lanatus HOM05D004036 ORTHO05D004576 9.4e-09 64.3 193 32.6
PGSC0003DMG400033628 Solanum tuberosum HOM05D004036 ORTHO05D004576 1.6e-08 63.5 191 34.0
TAR626G0352 Trochodendron aralioides HOM05D004036 ORTHO05D004576 1.6e-08 63.5 111 40.5
CsaV3_3G046690 Cucumis sativus L. HOM05D004036 ORTHO05D004576 2.1e-08 63.2 105 44.8
EL10Ac2g02537 Beta vulgaris HOM05D004036 ORTHO05D004576 2.7e-08 62.8 160 34.4
Haze_21623 Corylus avellana HOM05D004036 ORTHO05D004576 2.7e-08 62.8 229 28.8
Gorai.010G053700 Gossypium raimondii HOM05D004036 ORTHO05D004576 3.6e-08 62.4 145 33.1
Sed0023915 Sechium edule HOM05D004036 ORTHO05D004576 3.6e-08 62.4 195 32.3
DCAR_007682 Daucus carota HOM05D004036 ORTHO05D004576 4.7e-08 62.0 116 41.4
HanXRQChr13g0409481 Helianthus annuus HOM05D004036 ORTHO05D004576 4.7e-08 62.0 94 40.4
ECA240G1837 Erigeron canadensis HOM05D004036 ORTHO05D004576 6.1e-08 61.6 182 29.7
Glyma.06G073400 Glycine max HOM05D004036 ORTHO05D004576 6.1e-08 61.6 142 34.5
AUR62024838 Chenopodium quinoa HOM05D004036 ORTHO05D004576 1.8e-07 60.1 156 34.0
CiPaw.03G235800 Carya illinoinensis HOM05D004036 ORTHO05D004576 2.3e-07 59.7 111 45.0
AUR62032381 Chenopodium quinoa HOM05D004036 ORTHO05D004576 2.3e-07 59.7 164 34.8
MELO3C003669.2 Cucumis melo HOM05D004036 ORTHO05D004576 2.3e-07 59.7 147 32.0
GSVIVG01015440001 Vitis vinifera HOM05D004036 ORTHO05D004576 2.3e-07 59.7 70 42.9
HanXRQChr03g0077811 Helianthus annuus HOM05D004036 ORTHO05D004576 5.2e-07 58.5 90 41.1
MBI01_g10034_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 6.7e-07 58.2 95 42.1
Sabra06G0192900 Salix brachista HOM05D004036 ORTHO05D004576 8.8e-07 57.8 196 32.7
Sed0025074 Sechium edule HOM05D004036 ORTHO05D004576 1.5e-06 57.0 140 34.3
QL02p086217 Quercus lobata HOM05D004036 ORTHO05D004576 2.0e-06 56.6 197 29.4
CSS0014753 Camellia sinensis var. sinensis HOM05D004036 ORTHO05D004576 2.6e-06 56.2 67 46.3
Gohir.D04G088301 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.6e-06 56.2 45 60.0
Gohir.D12G143101 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.6e-06 56.2 45 60.0
BolC2t06459H Brassica oleracea HOM05D004036 ORTHO05D004576 5.7e-06 55.1 84 42.9
SGA_v2.0_scaffold169G38632 Striga asiatica HOM05D004036 ORTHO05D004576 7.5e-06 54.7 191 29.3
Phvul.009G097900 Phaseolus vulgaris HOM05D004036 ORTHO05D050263 9.7e-06 54.3 92 39.1


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