Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p59100 Brassica napus HOM05D003663 ORTHO05D010021 2.9e-137 491.9 244 100.0
BolC2t11965H Brassica oleracea HOM05D003663 ORTHO05D010021 6.8e-123 444.1 253 90.9
BcaC03g17870 Brassica carinata HOM05D011290 ORTHO05D010021 4.9e-97 358.2 226 82.7
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 4.2e-96 355.1 234 80.3
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 2.2e-84 316.2 273 67.0
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 4.1e-83 312.0 274 65.0
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 4.1e-83 312.0 274 65.0
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 5.9e-82 308.1 274 64.2
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 5.9e-82 308.1 274 64.2
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 6.7e-70 268.1 149 88.6
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 8.5e-65 251.1 149 83.9
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 9.1e-59 231.1 149 80.5
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 2.7e-55 219.5 171 70.2
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 1.6e-47 193.7 170 64.7
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 9.1e-43 177.9 165 61.2
Carub.0006s2422 Capsella rubella HOM05D003663 ORTHO05D010021 1.6e-42 177.2 106 87.7
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 1.2e-34 151.0 252 40.1
Sp2g21380 Schrenkiella parvula HOM05D003663 ORTHO05D010021 1.7e-33 147.1 102 73.5
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.3e-33 146.7 252 39.3
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 2.9e-33 146.4 252 40.5
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 8.6e-33 144.8 252 40.1
Thhalv10005177m.g Eutrema salsugineum HOM05D003663 ORTHO05D010021 1.9e-32 143.7 102 74.5
BcaC04g23625 Brassica carinata HOM05D003663 ORTHO05D010021 1.8e-30 137.1 101 71.3
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 3.1e-30 136.3 253 37.9
BcaNung02824 Brassica carinata HOM05D003663 ORTHO05D010021 5.2e-30 135.6 98 71.4
CARHR186970 Cardamine hirsuta HOM05D003663 ORTHO05D010021 1.3e-28 131.0 102 69.6
Carub.0006s2421 Capsella rubella HOM05D003663 ORTHO05D010021 4.9e-28 129.0 103 66.0
THA.LOC104818768 Tarenaya hassleriana HOM05D003663 ORTHO05D010021 6.0e-26 122.1 105 67.6
Thhalv10021806m.g Eutrema salsugineum HOM05D003663 ORTHO05D010021 2.0e-21 107.1 104 55.8
A03p34380 Brassica napus HOM05D003663 ORTHO05D010021 4.1e-19 99.4 104 52.9
Sp3g04840 Schrenkiella parvula HOM05D003663 ORTHO05D010021 2.7e-18 96.7 107 49.5
BcaB04g19233 Brassica carinata HOM05D003663 ORTHO05D010021 3.5e-18 96.3 90 56.7
BraA03t12614Z Brassica rapa HOM05D003663 ORTHO05D010021 3.5e-18 96.3 104 51.9
CARHR080410 Cardamine hirsuta HOM05D003663 ORTHO05D010021 3.9e-17 92.8 106 49.1
THA.LOC104803108 Tarenaya hassleriana HOM05D003663 ORTHO05D010021 3.9e-17 92.8 95 55.8
Carub.0003s0532 Capsella rubella HOM05D003663 ORTHO05D010021 5.1e-17 92.4 110 47.3
BcaB04g19228 Brassica carinata HOM05D003663 ORTHO05D010021 6.6e-17 92.0 104 51.9
BcaC01g04309 Brassica carinata HOM05D003663 ORTHO05D010021 6.6e-17 92.0 104 51.9
BolC3t16468H Brassica oleracea HOM05D003663 ORTHO05D010021 6.6e-17 92.0 104 51.9
C03p41850 Brassica napus HOM05D003663 ORTHO05D010021 1.1e-16 91.3 104 51.9
AL3G16710 Arabidopsis lyrata HOM05D003663 ORTHO05D010021 2.5e-16 90.1 63 66.7
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 6.2e-15 85.5 234 32.1
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 1.1e-14 84.7 48 83.3
Aa31LG5G16360 Aethionema arabicum HOM05D003663 ORTHO05D010021 4.9e-12 75.9 104 48.1
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 8.3e-12 75.1 57 71.9
CiPaw.02G000600 Carya illinoinensis HOM05D008494 ORTHO05D010021 3.2e-11 73.2 92 40.2
RcHm_v2.0_Chr3g0459041 Rosa chinensis HOM05D008494 ORTHO05D010021 5.4e-11 72.4 90 40.0
AT3G05936 Arabidopsis thaliana HOM05D003663 ORTHO05D010021 7.1e-11 72.0 89 49.4
QL03p011411 Quercus lobata HOM05D008494 ORTHO05D010021 1.7e-09 67.4 92 41.3
FAN14G1748 Fragaria x ananassa HOM05D008494 ORTHO05D010021 6.6e-09 65.5 73 39.7
Manes.08G105911 Manihot esculenta HOM05D008494 ORTHO05D010021 1.5e-08 64.3 90 40.0
Prupe.6G302200 Prunus persica HOM05D008494 ORTHO05D010021 2.5e-08 63.5 89 39.3
VMungo1383G1264 Vigna mungo HOM05D008494 ORTHO05D010021 1.2e-07 61.2 83 34.9
Manes.09G182700 Manihot esculenta HOM05D008494 ORTHO05D010021 3.6e-07 59.7 69 42.0
TPR.G1638 Trifolium pratense HOM05D008494 ORTHO05D010021 3.6e-07 59.7 111 31.5
Haze_15004 Corylus avellana HOM05D008494 ORTHO05D010021 8.1e-07 58.5 89 40.4
Potri.005G000800 Populus trichocarpa HOM05D008494 ORTHO05D010021 1.1e-06 58.2 107 35.5
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 1.4e-06 57.8 90 38.9
Oeu033225.1 Olea europaea HOM05D008494 ORTHO05D010021 2.4e-06 57.0 106 34.9
Potri.013G000100 Populus trichocarpa HOM05D008494 ORTHO05D010021 2.4e-06 57.0 100 38.0
Glyma.03G227000 Glycine max HOM05D008494 ORTHO05D010021 3.1e-06 56.6 84 35.7
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 4.0e-06 56.2 45 62.2
MD04G1183700 Malus domestica HOM05D008494 ORTHO05D010021 5.2e-06 55.8 74 39.2


User provided reference genes

Program Settings