Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p58630 Brassica napus HOM05D016546 ORTHO05D100659 4.2e-80 301.2 142 100.0
BraA09t40085Z Brassica rapa HOM05D016546 ORTHO05D024036 3.6e-47 191.8 105 88.6
BolC9t55987H Brassica oleracea HOM05D016546 ORTHO05D024036 4.6e-47 191.4 105 88.6
BcaC09g51697 Brassica carinata HOM05D016546 ORTHO05D024036 1.3e-28 130.2 61 100.0
C02p45810 Brassica napus HOM05D016546 ORTHO05D024036 1.9e-24 116.3 54 100.0
A09p46210 Brassica napus HOM05D016546 ORTHO05D024036 1.2e-23 113.6 54 98.1
BcaC03g16318 Brassica carinata HOM05D016546 ORTHO05D039177 2.1e-15 86.3 67 68.7
BolC2t10152H Brassica oleracea HOM05D016546 ORTHO05D039177 1.4e-14 83.6 101 54.5
CARHR004850 Cardamine hirsuta HOM05D006033 ORTHO05D007112 1.1e-08 63.9 41 70.7
BcaC07g42135 Brassica carinata HOM05D006033 ORTHO05D007112 2.8e-07 59.3 43 67.4
C08p51760 Brassica napus HOM05D006033 ORTHO05D007112 2.8e-07 59.3 43 67.4
BolC8t52705H Brassica oleracea HOM05D006033 ORTHO05D007112 2.8e-07 59.3 43 67.4
A09p67480 Brassica napus HOM05D006033 ORTHO05D007112 3.6e-07 58.9 43 67.4
Thhalv10007699m.g Eutrema salsugineum HOM05D006033 ORTHO05D007112 1.0e-06 57.4 42 66.7
Sp1g04220 Schrenkiella parvula HOM05D006033 ORTHO05D007112 1.0e-06 57.4 42 66.7
BraA09t42076Z Brassica rapa HOM05D006033 ORTHO05D007112 1.4e-06 57.0 43 65.1


User provided reference genes

Program Settings