Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p55910 Brassica napus HOM05D000313 ORTHO05D032146 6.9e-47 190.3 95 100.0
BolC2t11649H Brassica oleracea HOM05D000313 ORTHO05D032146 6.9e-47 190.3 95 100.0
BcaC03g17599 Brassica carinata HOM05D000313 ORTHO05D032146 3.2e-44 181.4 95 94.7
BraA05t19528Z Brassica rapa HOM05D000077 ORTHO05D033218 1.0e-21 106.7 51 98.0
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-20 103.2 107 54.2
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-18 96.7 105 53.3
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-18 95.9 107 51.4
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-17 92.8 107 50.5
A03p06240 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-16 88.2 105 48.6
A09p13690 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-16 88.2 105 48.6
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-16 88.2 105 48.6
A09p47010 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-16 88.2 107 47.7
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-16 88.2 105 48.6
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 3.7e-16 88.2 107 47.7
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-16 87.4 78 59.0
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-15 86.7 88 52.3
A05p08730 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-15 85.1 61 70.5
BcaC06g35488 Brassica carinata HOM05D016462 ORTHO05D018755 2.0e-14 82.4 100 49.0
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-14 81.3 112 46.4
BcaC02g08922 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-13 79.3 107 48.6
C04p49090 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-13 79.3 107 48.6
BolC4t26491H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-13 79.3 107 48.6
BcaB04g17788 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-13 78.2 62 61.3
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-13 77.0 52 65.4
BolC5t33369H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-13 77.0 63 58.7
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-12 76.6 49 69.4
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-12 76.6 49 69.4
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-12 76.3 100 46.0
C02p19630 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-12 75.5 47 72.3
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-12 75.5 100 46.0
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-12 74.7 110 41.8
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-12 74.7 54 61.1
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 5.5e-12 74.3 70 51.4
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-12 73.9 52 63.5
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-12 73.9 96 43.8
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 9.5e-12 73.6 91 50.5
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-12 73.6 51 62.7
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 9.5e-12 73.6 51 62.7
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-11 73.2 51 62.7
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-11 73.2 51 62.7
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-11 73.2 67 52.2
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-11 73.2 51 62.7
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-11 72.4 89 46.1
BcaNung02333 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-11 72.4 92 47.8
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-11 72.4 92 47.8
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-11 72.4 61 54.1
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-11 72.4 89 46.1
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-11 72.0 68 51.5
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-11 72.0 96 45.8
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-11 71.2 78 47.4
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-11 71.2 50 64.0
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-11 71.2 89 44.9
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-11 71.2 95 43.2
BraA08t34048Z Brassica rapa HOM05D000313 ORTHO05D000065 4.7e-11 71.2 50 64.0
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 6.1e-11 70.9 61 54.1
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 6.1e-11 70.9 100 45.0
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-11 70.9 96 42.7
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-11 70.5 96 41.7
A03p61800 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-11 70.5 96 39.6
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-11 70.5 96 41.7
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-11 70.5 45 68.9
BolC3t13528H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-11 70.5 88 39.8
BolC3t16695H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-11 70.5 96 41.7
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-11 70.5 45 68.9
A01p05990 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-10 70.1 51 60.8
A07p14660 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-10 70.1 51 60.8
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-10 70.1 50 64.0
BraA07t29209Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-10 70.1 51 60.8
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-10 69.3 100 44.0
A02p29900 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-10 69.3 50 62.0
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-10 69.3 100 44.0
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-10 69.3 100 44.0
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 1.8e-10 69.3 50 62.0
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-10 68.9 51 58.8
C06p05520 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-10 68.9 83 43.4
BcaNung00032 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-10 68.6 60 56.7
C02p41210 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-10 68.6 39 76.9
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-10 68.2 63 52.4
C09p17390 Brassica napus HOM05D000313 ORTHO05D031755 5.2e-10 67.8 62 50.0
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-10 67.8 61 45.9
C09p46440 Brassica napus HOM05D012282 ORTHO05D027450 6.8e-10 67.4 50 64.0
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-10 67.4 53 62.3
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 8.8e-10 67.0 88 38.6
BcaB02g10926 Brassica carinata HOM05D000313 ORTHO05D000065 8.8e-10 67.0 47 61.7
C03p10470 Brassica napus HOM05D000313 ORTHO05D000065 8.8e-10 67.0 88 38.6
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 8.8e-10 67.0 87 44.8
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 8.8e-10 67.0 51 52.9
BcaC05g27418 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-09 66.6 89 39.3
A09p19690 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 66.6 62 50.0
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-09 66.2 93 43.0
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-09 66.2 52 61.5
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-09 66.2 96 43.8
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-09 66.2 96 43.8
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-09 66.2 103 43.7
BcaB01g01000 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-09 65.9 47 57.4
A03p13160 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-09 65.9 37 81.1
BolC8t47658H Brassica oleracea HOM05D009089 ORTHO05D013779 3.4e-09 65.1 82 42.7
BcaC04g22603 Brassica carinata HOM05D000313 ORTHO05D031755 4.4e-09 64.7 62 48.4
C07p05650 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-09 64.7 65 52.3
BolC9t54639H Brassica oleracea HOM05D000313 ORTHO05D031755 4.4e-09 64.7 62 48.4
C02p41580 Brassica napus HOM05D012282 ORTHO05D040819 5.7e-09 64.3 64 48.4
BolC2t10174H Brassica oleracea HOM05D012282 ORTHO05D040819 5.7e-09 64.3 64 48.4
BcaC01g03291 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-09 63.5 88 39.8
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-09 63.5 78 46.2
BolC3t17675H Brassica oleracea HOM05D000313 ORTHO05D000065 9.8e-09 63.5 88 39.8
BcaC03g14145 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-08 63.2 71 45.1
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-08 62.8 34 79.4
BcaC07g39234 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-08 62.4 107 34.6
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-08 62.0 90 36.7
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-08 61.6 51 51.0
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-08 61.6 75 37.3
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-08 61.6 75 37.3
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-08 61.2 39 69.2
BcaC04g22604 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-08 60.8 86 40.7
C03p72030 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-08 60.8 37 83.8
C07p29470 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-08 60.8 37 83.8
BolC2t10911H Brassica oleracea HOM05D000313 ORTHO05D000065 6.3e-08 60.8 82 37.8
A02p31320 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-08 60.5 82 37.8
C07p49340 Brassica napus HOM05D012282 ORTHO05D027450 8.3e-08 60.5 63 47.6
BolC1t02216H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-07 59.3 44 61.4
BolC3t19501H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-07 59.3 36 83.3
BcaC07g38049 Brassica carinata HOM05D000313 ORTHO05D027040 3.1e-07 58.5 34 73.5
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-07 58.2 61 45.9
C01p43780 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.2 61 45.9
C02p49520 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.2 61 45.9
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.2 61 45.9
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-07 58.2 61 45.9
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-07 57.8 51 47.1
C07p54020 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-07 57.8 37 81.1
C09p41830 Brassica napus HOM05D033896 ORTHO05D042691 5.4e-07 57.8 33 81.8
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 5.4e-07 57.8 69 44.9
BolC6t37298H Brassica oleracea HOM05D033896 ORTHO05D000065 5.4e-07 57.8 33 81.8
BolC9t57070H Brassica oleracea HOM05D033896 ORTHO05D042691 5.4e-07 57.8 33 81.8
BcaB06g27486 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-07 57.4 37 70.3
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-07 57.4 44 50.0
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 55.8 62 43.5
C07p60230 Brassica napus HOM05D000313 ORTHO05D013518 2.0e-06 55.8 61 42.6
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-06 55.8 62 43.5
BcaC02g08295 Brassica carinata HOM05D014693 ORTHO05D039701 2.7e-06 55.5 56 44.6
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-06 55.5 69 39.1
BolC9t56336H Brassica oleracea HOM05D000313 ORTHO05D013518 4.5e-06 54.7 78 37.2
BolC9t56801H Brassica oleracea HOM05D000313 ORTHO05D013518 4.5e-06 54.7 78 37.2
BcaB04g19080 Brassica carinata HOM05D000313 ORTHO05D027505 5.9e-06 54.3 87 41.4
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-06 54.3 47 55.3
BcaC05g28021 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-06 53.9 58 39.7
BcaC05g28023 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-06 53.9 53 45.3
A01p15460 Brassica napus HOM05D000313 ORTHO05D000065 7.8e-06 53.9 49 49.0
A06p26590 Brassica napus HOM05D000313 ORTHO05D042177 7.8e-06 53.9 68 36.8
C02p47000 Brassica napus HOM05D000313 ORTHO05D013518 7.8e-06 53.9 97 34.0
BolC2t10750H Brassica oleracea HOM05D000313 ORTHO05D013518 7.8e-06 53.9 97 34.0
BraA06t25588Z Brassica rapa HOM05D000313 ORTHO05D042177 7.8e-06 53.9 68 36.8


User provided reference genes

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