Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 3.8e-124 448.4 259 100.0
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 1.7e-111 406.4 262 87.0
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 3.9e-84 315.5 237 75.5
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 1.1e-83 313.9 243 75.7
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 4.8e-74 282.0 180 96.1
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 1.9e-62 243.4 200 64.0
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 1.9e-62 243.4 200 64.0
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 9.3e-62 241.1 200 63.0
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 3.5e-61 239.2 200 64.0
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 7.9e-61 238.0 203 64.0
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 1.0e-60 237.7 243 60.9
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 2.3e-60 236.5 243 60.9
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 1.6e-58 230.3 227 59.9
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.4e-57 227.3 237 58.2
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 4.1e-57 225.7 229 57.6
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 4.5e-56 222.2 194 62.4
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 5.0e-55 218.8 147 84.4
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.5e-54 216.5 206 58.3
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.6e-48 196.4 196 55.1
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 1.1e-43 181.0 194 52.6
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.2e-42 176.8 230 48.3
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 6.3e-42 175.3 221 48.9
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 3.1e-41 172.9 212 49.5
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.6e-40 169.9 230 48.3
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 7.7e-40 168.3 228 47.8
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.9e-36 156.0 194 44.8
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 3.9e-36 156.0 216 43.5
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 1.3e-34 151.0 206 45.1
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 7.7e-32 141.7 187 41.7
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.9e-31 139.8 219 42.5
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 1.5e-30 137.5 188 45.2
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.5e-30 137.5 217 41.5
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 1.9e-30 137.1 215 40.0
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.7e-29 133.3 189 46.6
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 3.6e-29 132.9 201 41.3
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 3.6e-29 132.9 201 41.3
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 1.0e-28 131.3 202 42.6
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 1.0e-28 131.3 202 42.6
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 1.8e-28 130.6 198 41.9
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 1.8e-28 130.6 198 41.9
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 2.3e-28 130.2 201 41.3
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 4.0e-28 129.4 198 41.9
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 4.0e-28 129.4 198 41.9
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 5.2e-28 129.0 198 41.4
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 5.2e-28 129.0 198 41.4
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 1.5e-27 127.5 198 41.4
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 1.5e-27 127.5 183 43.7
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.6e-27 126.7 181 38.7
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 2.6e-27 126.7 181 38.7
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 3.4e-27 126.3 198 40.4
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 4.4e-27 125.9 207 39.6
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 1.3e-26 124.4 207 39.6
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 1.7e-26 124.0 206 37.9
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 1.7e-26 124.0 206 37.9
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.2e-26 123.6 199 39.2
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 6.3e-26 122.1 188 39.9
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 1.4e-25 120.9 220 40.0
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 1.4e-25 120.9 220 40.0
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.8e-25 120.6 172 38.4
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 1.8e-25 120.6 190 40.0
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 7.0e-25 118.6 185 42.2
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 9.1e-25 118.2 220 37.3
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 4.5e-24 115.9 200 37.5
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 7.7e-24 115.2 201 38.3
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 1.3e-23 114.4 218 33.9
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 2.2e-23 113.6 181 39.2
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.9e-23 113.2 196 37.2
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.1e-22 111.3 186 37.6
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.1e-22 111.3 186 37.6
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.5e-22 110.9 192 37.5
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.6e-21 107.5 183 36.6
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 2.1e-21 107.1 180 38.3
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 2.7e-21 106.7 231 35.5
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 3.6e-21 106.3 192 36.5
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 3.6e-21 106.3 231 35.5
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 8.0e-21 105.1 206 38.3
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 3.0e-20 103.2 185 38.9
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 3.0e-20 103.2 183 33.3
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 6.8e-20 102.1 185 36.8
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 8.8e-20 101.7 185 38.9
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 8.8e-20 101.7 185 38.9
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 1.5e-19 100.9 185 38.4
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 2.2e-18 97.1 205 34.6
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 3.7e-18 96.3 173 38.7
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 3.7e-18 96.3 173 38.7
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 5.4e-17 92.4 193 31.6
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 2.0e-16 90.5 93 46.2
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 4.5e-16 89.4 173 34.7
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 5.9e-16 89.0 192 36.5
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.0e-15 88.2 208 36.5
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 7.2e-14 82.0 111 45.9
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 5.2e-12 75.9 210 31.9
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 8.9e-12 75.1 110 37.3
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 4.4e-11 72.8 190 34.2
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 4.9e-10 69.3 172 32.6
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 4.9e-10 69.3 172 32.6
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 4.9e-10 69.3 172 32.6
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 6.3e-10 68.9 172 32.6
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 6.3e-10 68.9 172 32.6
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 2.9e-07 60.1 164 31.1
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 2.9e-07 60.1 64 50.0
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 2.5e-06 57.0 189 28.0


User provided reference genes

Program Settings