Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p54970 Brassica napus HOM05D006142 ORTHO05D000013 1.8e-75 285.8 138 100.0
C06p09170 Brassica napus HOM05D006142 ORTHO05D000013 9.4e-53 210.3 138 76.1
BolC2t10215H Brassica oleracea HOM05D000017 ORTHO05D000013 8.5e-38 160.6 78 91.0
C04p39100 Brassica napus HOM05D000017 ORTHO05D000013 7.2e-37 157.5 77 90.9
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 1.0e-30 137.1 77 76.6
BraA05t21217Z Brassica rapa HOM05D000017 ORTHO05D000013 1.0e-30 137.1 77 76.6
BolC2t09931H Brassica oleracea HOM05D000017 ORTHO05D000013 5.5e-29 131.3 75 76.0
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 9.5e-29 130.6 77 74.0
BolC7t42636H Brassica oleracea HOM05D000017 ORTHO05D000013 6.1e-28 127.9 77 71.4
C02p39170 Brassica napus HOM05D006142 ORTHO05D000013 6.8e-27 124.4 76 69.7
BraA08t32812Z Brassica rapa HOM05D000017 ORTHO05D000013 5.7e-26 121.3 101 58.4
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 4.1e-24 115.2 98 57.1
BolC8t48426H Brassica oleracea HOM05D006142 ORTHO05D000013 1.6e-15 86.7 65 63.1
A01p19460 Brassica napus HOM05D000017 ORTHO05D000013 6.6e-14 81.3 77 49.4
A02p36610 Brassica napus HOM05D000017 ORTHO05D000013 6.6e-14 81.3 77 49.4
C03p72500 Brassica napus HOM05D000017 ORTHO05D000013 1.5e-13 80.1 77 48.1
C06p36610 Brassica napus HOM05D000017 ORTHO05D000013 1.5e-13 80.1 77 48.1
A05p09870 Brassica napus HOM05D000017 ORTHO05D000013 1.4e-11 73.6 77 42.9
A05p25800 Brassica napus HOM05D000017 ORTHO05D000013 1.4e-11 73.6 77 42.9
A09p29980 Brassica napus HOM05D000017 ORTHO05D000013 1.4e-11 73.6 77 42.9
C03p60170 Brassica napus HOM05D000017 ORTHO05D015524 1.4e-11 73.6 62 51.6
BraA02t08656Z Brassica rapa HOM05D000017 ORTHO05D000013 1.8e-11 73.2 65 52.3
BraA07t31230Z Brassica rapa HOM05D000017 ORTHO05D000013 6.8e-11 71.2 65 49.2
BolC4t24331H Brassica oleracea HOM05D000017 ORTHO05D000013 8.9e-11 70.9 65 47.7
Thhalv10010932m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.2e-10 70.5 65 47.7
A02p27070 Brassica napus HOM05D000017 ORTHO05D000013 1.5e-10 70.1 65 47.7
BolC4t25142H Brassica oleracea HOM05D000017 ORTHO05D000013 1.5e-10 70.1 77 41.6
BraA07t28119Z Brassica rapa HOM05D000017 ORTHO05D000013 1.3e-09 67.0 65 44.6
BraA09t38561Z Brassica rapa HOM05D000017 ORTHO05D000013 2.2e-09 66.2 85 38.8
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-08 63.2 67 41.8
Atru.chr9.32 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-08 63.2 67 41.8
Atru.chr9.269 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-08 62.8 67 41.8
C05p36080 Brassica napus HOM05D008468 ORTHO05D000013 2.4e-08 62.8 100 35.0
Atru.chr9.234 Acer truncatum HOM05D000017 ORTHO05D000013 5.4e-08 61.6 67 41.8
BraA01t01575Z Brassica rapa HOM05D000017 ORTHO05D000013 1.6e-07 60.1 68 41.2
C03p58250 Brassica napus HOM05D000017 ORTHO05D000013 2.1e-07 59.7 68 41.2
C04p55370 Brassica napus HOM05D007818 ORTHO05D000013 2.1e-07 59.7 68 41.2
C05p37810 Brassica napus HOM05D000017 ORTHO05D000013 2.1e-07 59.7 68 41.2
C07p00660 Brassica napus HOM05D007818 ORTHO05D000013 2.1e-07 59.7 68 41.2
C07p06900 Brassica napus HOM05D007818 ORTHO05D000013 2.1e-07 59.7 68 41.2
C01p45330 Brassica napus HOM05D000017 ORTHO05D000013 2.7e-07 59.3 68 41.2
Atru.chr9.489 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-07 58.5 67 40.3
C04p05470 Brassica napus HOM05D000017 ORTHO05D000013 4.6e-07 58.5 68 39.7
A07p05910 Brassica napus HOM05D008468 ORTHO05D000013 6.0e-07 58.2 68 39.7
C01p48070 Brassica napus HOM05D007818 ORTHO05D000013 6.0e-07 58.2 58 44.8
C07p08940 Brassica napus HOM05D000017 ORTHO05D000013 6.0e-07 58.2 58 44.8
BraA01t02470Z Brassica rapa HOM05D000017 ORTHO05D000013 7.8e-07 57.8 68 39.7
Atru.chr3.4260 Acer truncatum HOM05D000017 ORTHO05D000013 1.0e-06 57.4 81 39.5
C07p11960 Brassica napus HOM05D000017 ORTHO05D000013 1.0e-06 57.4 68 39.7
CANSAT54G2984 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 57.0 113 29.2
Thhalv10026781m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.3e-06 57.0 77 32.5
C05p45440 Brassica napus HOM05D007818 ORTHO05D000013 1.7e-06 56.6 68 39.7
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 2.3e-06 56.2 77 39.0
Thhalv10029395m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.3e-06 56.2 75 34.7
C07p60300 Brassica napus HOM05D014889 ORTHO05D000013 3.0e-06 55.8 67 41.8
C05p44350 Brassica napus HOM05D007818 ORTHO05D000013 3.9e-06 55.5 57 43.9
C06p04870 Brassica napus HOM05D008468 ORTHO05D000013 3.9e-06 55.5 68 38.2
Thhalv10002279m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.9e-06 55.5 63 33.3
CANSAT11G2465 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-06 55.1 67 37.3
CANSAT56G3068 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-06 55.1 67 37.3
PSO063G3846 Papaver somniferum HOM05D000017 ORTHO05D000013 5.1e-06 55.1 71 35.2
Atru.chr2.3130 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 64 43.8
Atru.chr5.868 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 75 40.0
Atru.chr7.593 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 81 38.3
C04p56110 Brassica napus HOM05D001498 ORTHO05D019943 6.6e-06 54.7 70 38.6
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 6.6e-06 54.7 70 40.0
CANSAT11G1886 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-06 54.7 67 37.3
Thhalv10002182m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 46 45.7
C05p18340 Brassica napus HOM05D000017 ORTHO05D000013 8.6e-06 54.3 68 39.7
CANSAT78G0995 Cannabis sativa HOM05D000017 ORTHO05D000013 8.6e-06 54.3 67 37.3
CANSAT78G1044 Cannabis sativa HOM05D000017 ORTHO05D000013 8.6e-06 54.3 74 35.1
Thhalv10027116m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 8.6e-06 54.3 63 33.3


User provided reference genes

Program Settings