Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p54110 Brassica napus HOM05D006998 ORTHO05D008733 1.8e-75 285.8 141 100.0
BolC2t11473H Brassica oleracea HOM05D006998 ORTHO05D008733 1.8e-75 285.8 141 100.0
A02p35400 Brassica napus HOM05D006998 ORTHO05D008733 1.5e-74 282.7 141 97.9
BraA02t08541Z Brassica rapa HOM05D006998 ORTHO05D008733 7.6e-74 280.4 141 96.5
C07p36390 Brassica napus HOM05D006998 ORTHO05D008733 6.9e-67 257.3 141 87.9
Carub.0005s0564 Capsella rubella HOM05D006998 ORTHO05D008733 3.4e-66 255.0 141 87.9
Sp2g16530 Schrenkiella parvula HOM05D006998 ORTHO05D008733 3.4e-66 255.0 135 91.9
AL5G16660 Arabidopsis lyrata HOM05D006998 ORTHO05D008733 5.8e-66 254.2 139 87.8
BcaC06g31012 Brassica carinata HOM05D006998 ORTHO05D008733 9.9e-66 253.4 140 87.1
BolC7t44158H Brassica oleracea HOM05D006998 ORTHO05D008733 1.7e-65 252.7 141 85.1
A06p41260 Brassica napus HOM05D006998 ORTHO05D008733 2.4e-64 248.8 140 85.0
BraA06t27050Z Brassica rapa HOM05D006998 ORTHO05D008733 2.4e-64 248.8 140 85.0
Aa31LG2G5380 Aethionema arabicum HOM05D006998 ORTHO05D008733 1.7e-62 242.7 141 82.3
THA.LOC104823962 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 2.3e-62 242.3 141 83.0
THA.LOC104823963 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 2.3e-62 242.3 141 83.0
Potri.001G336600 Populus trichocarpa HOM05D006998 ORTHO05D008733 4.5e-50 201.4 139 69.1
Sabra16G0217400 Salix brachista HOM05D006998 ORTHO05D008733 7.6e-50 200.7 139 69.1
CiPaw.13G047700 Carya illinoinensis HOM05D006998 ORTHO05D008733 1.1e-48 196.8 139 69.8
Manes.15G155800 Manihot esculenta HOM05D006998 ORTHO05D008733 1.1e-48 196.8 139 68.3
Ciclev10017134m.g Citrus clementina HOM05D006998 ORTHO05D008733 3.2e-48 195.3 139 67.6
COL.COLO4_29269 Corchorus olitorius HOM05D006998 ORTHO05D008733 3.2e-48 195.3 139 69.1
Thecc.04G025300 Theobroma cacao HOM05D006998 ORTHO05D008733 3.2e-48 195.3 122 75.4
Atru.chr6.2476 Acer truncatum HOM05D006998 ORTHO05D008733 7.1e-48 194.1 139 68.3
Gohir.D07G232600 Gossypium hirsutum HOM05D006998 ORTHO05D008733 2.1e-47 192.6 139 67.6
Gorai.001G267900 Gossypium raimondii HOM05D006998 ORTHO05D008733 2.1e-47 192.6 139 67.6
Cpa.g.sc130.46 Carica papaya HOM05D006998 ORTHO05D008733 3.5e-47 191.8 122 72.1
Duzib147G0953 Durio zibethinus HOM05D006998 ORTHO05D008733 4.6e-47 191.4 130 70.8
QL02p001451 Quercus lobata HOM05D006998 ORTHO05D008733 4.6e-47 191.4 139 69.1
Gohir.A07G225400 Gossypium hirsutum HOM05D006998 ORTHO05D008733 1.0e-46 190.3 139 67.6
MELO3C014841.2 Cucumis melo HOM05D006998 ORTHO05D008733 1.5e-45 186.4 139 64.7
PSO782G5351 Papaver somniferum HOM05D006998 ORTHO05D008733 1.9e-45 186.0 139 61.9
Sed0003364 Sechium edule HOM05D006998 ORTHO05D008733 3.3e-45 185.3 130 66.9
CANSAT64G0830 Cannabis sativa HOM05D006998 ORTHO05D008733 4.3e-45 184.9 122 68.9
GSVIVG01003966001 Vitis vinifera HOM05D006998 ORTHO05D008733 5.6e-45 184.5 119 71.4
FAN14G5586 Fragaria x ananassa HOM05D006998 ORTHO05D008733 7.4e-45 184.1 139 65.5
MSTRG.3117 Avicennia marina HOM05D006998 ORTHO05D008733 1.6e-44 183.0 121 68.6
RcHm_v2.0_Chr2g0174071 Rosa chinensis HOM05D006998 ORTHO05D008733 1.6e-44 183.0 139 64.7
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea HOM05D006998 ORTHO05D008733 2.8e-44 182.2 117 72.6
Sc03g0006900 Simmondsia chinensis HOM05D006998 ORTHO05D008733 2.8e-44 182.2 138 65.2
TPR.G39742 Trifolium pratense HOM05D006998 ORTHO05D008733 2.8e-44 182.2 117 73.5
MD09G1018100 Malus domestica HOM05D006998 ORTHO05D008733 3.7e-44 181.8 138 62.3
AUR62015328 Chenopodium quinoa HOM05D006998 ORTHO05D008733 4.8e-44 181.4 135 66.7
Sc03g0007000 Simmondsia chinensis HOM05D006998 ORTHO05D008733 4.8e-44 181.4 138 65.2
TWI56G1021 Tripterygium wilfordii HOM05D006998 ORTHO05D008733 4.8e-44 181.4 121 70.2
Eucgr.I01699 Eucalyptus grandis HOM05D006998 ORTHO05D008733 1.4e-43 179.9 139 63.3
Medtr3g052740 Medicago truncatula HOM05D006998 ORTHO05D008733 1.4e-43 179.9 118 72.0
TAR371G1002 Trochodendron aralioides HOM05D006998 ORTHO05D008733 1.4e-43 179.9 139 62.6
EL10Ac3g06878 Beta vulgaris HOM05D006998 ORTHO05D008733 1.8e-43 179.5 127 67.7
Lalb_Chr20g0116091 Lupinus albus HOM05D006998 ORTHO05D008733 2.4e-43 179.1 119 70.6
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 3.1e-43 178.7 126 67.5
Aqoxy1G01464 Aquilegia oxysepala HOM05D006998 ORTHO05D008733 4.0e-43 178.3 119 68.1
Phvul.006G045900 Phaseolus vulgaris HOM05D006998 ORTHO05D008733 5.3e-43 177.9 118 70.3
Lj6g0003593 Lotus japonicus HOM05D006998 ORTHO05D008733 6.9e-43 177.6 130 66.9
MBI06_g05240_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 6.9e-43 177.6 135 63.0
Actinidia18425 Actinidia chinensis HOM05D006998 ORTHO05D008733 9.0e-43 177.2 139 60.4
CDE04G0536 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 1.2e-42 176.8 121 68.6
Solyc02g093730.4 Solanum lycopersicum HOM05D006998 ORTHO05D008733 1.2e-42 176.8 119 67.2
Ca_14748_v3 Cicer arietinum L. HOM05D006998 ORTHO05D008733 1.5e-42 176.4 118 71.2
Cc07_g00360 Coffea canephora HOM05D006998 ORTHO05D008733 1.5e-42 176.4 122 67.2
Glyma.08G318800 Glycine max HOM05D006998 ORTHO05D008733 2.0e-42 176.0 118 70.3
TPR.G33763 Trifolium pratense HOM05D006998 ORTHO05D008733 2.0e-42 176.0 118 71.2
ClCG05G013170 Citrullus lanatus HOM05D006998 ORTHO05D008733 2.6e-42 175.6 106 75.5
Lsat_1_v5_gn_4_184841 Lactuca sativa HOM05D006998 ORTHO05D008733 2.6e-42 175.6 138 62.3
CsaV3_3G027380 Cucumis sativus L. HOM05D006998 ORTHO05D008733 3.4e-42 175.3 106 75.5
Zm00001eb144320 Zea mays HOM05D006998 ORTHO05D008733 3.4e-42 175.3 139 59.7
PGSC0003DMG400012647 Solanum tuberosum HOM05D006998 ORTHO05D008733 5.8e-42 174.5 138 60.9
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea HOM05D006998 ORTHO05D008733 2.2e-41 172.6 122 69.7
ECA232G0345 Erigeron canadensis HOM05D006998 ORTHO05D008733 2.2e-41 172.6 119 67.2
MBI06_g43854_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 6.5e-41 171.0 108 70.4
FAN05G2331 Fragaria x ananassa HOM05D006998 ORTHO05D008733 8.4e-41 170.6 129 65.1
vmacro18311 Vaccinium macrocarpon HOM05D006998 ORTHO05D008733 8.4e-41 170.6 151 57.0
Os02g0197800 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 1.1e-40 170.2 133 60.2
SalBow2G2409 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.1e-40 170.2 119 65.5
SGA_v2.0_scaffold135G34933 Striga asiatica HOM05D006998 ORTHO05D008733 1.1e-40 170.2 119 64.7
HanXRQChr09g0255661 Helianthus annuus HOM05D006998 ORTHO05D008733 1.4e-40 169.9 119 65.5
CDE07G0016 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 5.5e-40 167.9 108 73.1
PSO063G6009 Papaver somniferum HOM05D006998 ORTHO05D008733 5.5e-40 167.9 173 49.7
Migut.H00050 Erythranthe guttata HOM05D006998 ORTHO05D008733 2.7e-39 165.6 117 64.1
Peaxi162Scf00080g01715 Petunia axillaris HOM05D006998 ORTHO05D008733 3.5e-39 165.2 106 67.9
CAN.G473.52 Capsicum annuum HOM05D006998 ORTHO05D008733 6.0e-39 164.5 106 70.8
Nitab4.5_0005414g0020 Nicotiana tabacum HOM05D006998 ORTHO05D008733 6.0e-39 164.5 112 65.2
Nitab4.5_0000040g0550 Nicotiana tabacum HOM05D006998 ORTHO05D008733 1.3e-38 163.3 106 67.9
CARHR148660 Cardamine hirsuta HOM05D006998 ORTHO05D008733 3.0e-38 162.2 90 87.8
ATR1089G022 Amborella trichopoda HOM05D006998 ORTHO05D008733 6.7e-38 161.0 115 65.2
HPP92_007225 Vanilla planifolia HOM05D006998 ORTHO05D008733 8.7e-38 160.6 112 67.0
AT3G27340 Arabidopsis thaliana HOM05D006998 ORTHO05D008733 1.5e-37 159.8 91 84.6
SalBow2G0885 Salvia bowleyana HOM05D006998 ORTHO05D008733 7.4e-37 157.5 106 68.9
Thhalv10005152m.g Eutrema salsugineum HOM05D006998 ORTHO05D008733 9.6e-37 157.1 88 87.5
Os01g0904300 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 1.6e-36 156.4 112 64.3
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea HOM05D006998 ORTHO05D008733 1.2e-34 150.2 117 61.5
Hund25052 Selenicereus undatus HOM05D006998 ORTHO05D008733 2.6e-34 149.1 134 56.0
SHI03852 Sapria himalayana HOM05D006998 ORTHO05D008733 2.2e-33 146.0 94 70.2
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis HOM05D006998 ORTHO05D008733 6.1e-31 137.9 107 58.9
VMungo0540G0081 Vigna mungo HOM05D006998 ORTHO05D008733 6.9e-27 124.4 80 71.2
SMO364G0335 Selaginella moellendorffii HOM05D006998 ORTHO05D008733 2.0e-26 122.9 101 55.4
Pp3c11_10230 Physcomitrium patens HOM05D006998 ORTHO05D008733 4.5e-26 121.7 104 53.8
unitig_744.g24361 Utricularia gibba HOM05D002252 ORTHO05D002451 7.7e-26 120.9 96 59.4
Dinv25701 Davidia involucrata HOM05D006998 ORTHO05D008733 3.8e-25 118.6 71 73.2
Haze_03392 Corylus avellana HOM05D006998 ORTHO05D008733 1.4e-24 116.7 90 70.0
Haze_03396 Corylus avellana HOM05D006998 ORTHO05D008733 1.4e-24 116.7 90 70.0
DCAR_011285 Daucus carota HOM05D006998 ORTHO05D008733 3.2e-24 115.5 69 75.4
Cfa010438 Carpinus fangiana HOM05D006998 ORTHO05D008733 7.2e-24 114.4 90 68.9
COL.COLO4_29265 Corchorus olitorius HOM05D006998 ORTHO05D008733 1.2e-23 113.6 91 65.9
THA.LOC104801054 Tarenaya hassleriana HOM05D002401 ORTHO05D007109 2.1e-23 112.8 87 67.8
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 6.1e-23 111.3 93 52.7
FAN02G1980 Fragaria x ananassa HOM05D006998 ORTHO05D008733 1.1e-21 107.1 91 61.5
Psat5g174840 Pisum sativum HOM05D006998 ORTHO05D008733 4.4e-21 105.1 69 72.5
Nn5g27086 Nelumbo nucifera HOM05D006998 ORTHO05D008733 2.8e-20 102.4 75 64.0
PGR142G0400 Punica granatum HOM05D006998 ORTHO05D008733 4.8e-20 101.7 83 60.2
BcaB01g01217 Brassica carinata HOM05D006998 ORTHO05D008733 2.4e-19 99.4 73 68.5
Sed0022519 Sechium edule HOM05D006998 ORTHO05D008733 9.7e-13 77.4 48 64.6
Medtr1252s0010 Medicago truncatula HOM05D006998 ORTHO05D008733 6.3e-12 74.7 71 50.7
Mapoly0001s0548 Marchantia polymorpha HOM05D006998 ORTHO05D008733 1.1e-11 73.9 66 59.1
Dinv33390 Davidia involucrata HOM05D006998 ORTHO05D008733 4.1e-11 72.0 70 55.7
Sed0018714 Sechium edule HOM05D006998 ORTHO05D008733 1.6e-10 70.1 69 52.2
FvH4_6g52430 Fragaria vesca HOM05D006998 ORTHO05D008733 5.9e-10 68.2 69 52.2
Prupe.3G299000 Prunus persica HOM05D000008 ORTHO05D000005 7.7e-10 67.8 69 53.6
Cre09.g413300 Chlamydomonas reinhardtii HOM05D006998 ORTHO05D008733 9.4e-08 60.8 54 48.1


User provided reference genes

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