Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p53670 Brassica napus HOM05D010449 ORTHO05D012420 4.4e-200 701.0 346 100.0
BolC2t11435H Brassica oleracea HOM05D010449 ORTHO05D012420 2.5e-195 685.3 347 98.0
BraA02t08508Z Brassica rapa HOM05D010449 ORTHO05D012420 1.2e-165 586.6 320 92.5
A02p34990 Brassica napus HOM05D010449 ORTHO05D012420 8.7e-164 580.5 320 91.6
BcaC03g17417 Brassica carinata HOM05D010449 ORTHO05D012420 1.0e-156 557.0 276 99.3
BcaB07g30196 Brassica carinata HOM05D010449 ORTHO05D012420 8.0e-109 397.9 303 71.6
BcaB07g30195 Brassica carinata HOM05D010449 ORTHO05D012420 4.1e-105 385.6 293 72.4
Sp2g16150 Schrenkiella parvula HOM05D010449 ORTHO05D012420 1.1e-102 377.5 297 70.0
BraA06t27079Z Brassica rapa HOM05D010449 ORTHO05D012420 1.8e-92 343.6 300 64.0
Thhalv10004671m.g Eutrema salsugineum HOM05D010449 ORTHO05D012420 1.8e-92 343.6 300 65.3
BolC7t44127H Brassica oleracea HOM05D010449 ORTHO05D012420 5.0e-87 325.5 299 62.2
C07p36120 Brassica napus HOM05D010449 ORTHO05D012420 7.3e-86 321.6 299 62.2
A06p41540 Brassica napus HOM05D010449 ORTHO05D012420 1.8e-84 317.0 295 61.4
BcaC06g33866 Brassica carinata HOM05D010449 ORTHO05D012420 1.5e-83 313.9 293 61.4
BcaC06g33867 Brassica carinata HOM05D010449 ORTHO05D012420 1.4e-81 307.4 299 58.2
Carub.0005s0522 Capsella rubella HOM05D010449 ORTHO05D012420 2.7e-80 303.1 295 59.3
AL5G16060 Arabidopsis lyrata HOM05D010449 ORTHO05D012420 3.6e-77 292.7 296 57.4
BcaC06g31026 Brassica carinata HOM05D010449 ORTHO05D012420 1.5e-75 287.3 289 56.4
CARHR148230 Cardamine hirsuta HOM05D010449 ORTHO05D012420 1.4e-73 280.8 287 57.5
AT3G27025 Arabidopsis thaliana HOM05D010449 ORTHO05D012420 1.0e-55 221.5 231 55.8
THA.LOC104825628 Tarenaya hassleriana HOM05D002793 ORTHO05D012420 6.0e-24 115.9 369 32.2
TWI60G1054 Tripterygium wilfordii HOM05D002793 ORTHO05D002965 9.4e-17 92.0 377 29.2
Thecc.04G040100 Theobroma cacao HOM05D002793 ORTHO05D002965 6.1e-16 89.4 308 30.8
Duzib147G0228 Durio zibethinus HOM05D002793 ORTHO05D002965 4.8e-13 79.7 230 33.5
Gohir.A10G071500 Gossypium hirsutum HOM05D002793 ORTHO05D002965 4.8e-13 79.7 301 28.9
COL.COLO4_13290 Corchorus olitorius HOM05D002793 ORTHO05D002965 8.2e-13 79.0 312 29.8
Gohir.D10G079500 Gossypium hirsutum HOM05D002793 ORTHO05D002965 4.1e-12 76.6 295 28.8
Gorai.011G086600 Gossypium raimondii HOM05D002793 ORTHO05D002965 1.5e-11 74.7 302 28.1
Dinv25648 Davidia involucrata HOM05D002793 ORTHO05D002965 2.0e-11 74.3 298 28.5
Haze_14896 Corylus avellana HOM05D002793 ORTHO05D002965 2.6e-11 73.9 321 32.1
Prupe.3G308500 Prunus persica HOM05D002793 ORTHO05D002965 1.0e-10 72.0 347 26.5
Gohir.A05G336800 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.7e-10 71.2 258 32.2
Gohir.D04G075300 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.7e-10 71.2 260 32.3
Gorai.012G084800 Gossypium raimondii HOM05D002793 ORTHO05D002965 1.7e-10 71.2 260 32.3
PGSC0003DMG400020205 Solanum tuberosum HOM05D002793 ORTHO05D002965 3.8e-10 70.1 245 28.6
PGR142G0558 Punica granatum HOM05D002793 ORTHO05D002965 3.2e-09 67.0 285 27.7
Sabra16G0209700 Salix brachista HOM05D002793 ORTHO05D002965 3.2e-09 67.0 228 32.5
THA.LOC104821129 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 4.2e-09 66.6 354 27.4
Lalb_Chr22g0360281 Lupinus albus HOM05D002793 ORTHO05D002965 1.2e-08 65.1 364 27.7
CiPaw.03G057900 Carya illinoinensis HOM05D002793 ORTHO05D002965 3.6e-08 63.5 345 25.5
Ciclev10018081m.g Citrus clementina HOM05D002793 ORTHO05D002965 6.1e-08 62.8 216 30.1
Eucgr.I01630 Eucalyptus grandis HOM05D002793 ORTHO05D002965 6.1e-08 62.8 240 28.8
Nitab4.5_0000542g0010 Nicotiana tabacum HOM05D002793 ORTHO05D002965 7.9e-08 62.4 336 25.3
Aa31LG2G5560 Aethionema arabicum HOM05D010449 ORTHO05D012420 1.0e-07 62.0 112 36.6
Manes.11G086900 Manihot esculenta HOM05D002793 ORTHO05D002965 1.8e-07 61.2 299 27.1
Atru.chr6.2594 Acer truncatum HOM05D002793 ORTHO05D002965 6.7e-07 59.3 278 26.3
Actinidia16924 Actinidia chinensis HOM05D002793 ORTHO05D002965 6.7e-07 59.3 228 29.4
Lsat_1_v5_gn_3_31200 Lactuca sativa HOM05D002793 ORTHO05D002965 2.0e-06 57.8 302 26.8
CsaV3_4G003020 Cucumis sativus L. HOM05D002793 ORTHO05D002965 2.6e-06 57.4 246 27.6
TAR629G0254 Trochodendron aralioides HOM05D002793 ORTHO05D002965 3.3e-06 57.0 241 29.5
GSVIVG01033059001 Vitis vinifera HOM05D002793 ORTHO05D002965 3.3e-06 57.0 171 34.5
THA.LOC104825488 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 4.4e-06 56.6 235 28.9
CANSAT64G0260 Cannabis sativa HOM05D002793 ORTHO05D002965 7.4e-06 55.8 300 27.0


User provided reference genes

Program Settings