Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 2.0e-144 515.8 265 100.0
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.4e-142 509.6 265 98.5
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.0e-136 489.2 270 94.8
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 2.3e-132 475.7 266 93.2
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 3.9e-132 474.9 267 92.1
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 7.4e-131 470.7 267 91.8
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 7.4e-131 470.7 267 91.8
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 2.4e-129 465.7 271 91.1
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 5.3e-129 464.5 270 90.7
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.7e-127 459.5 270 87.4
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 2.9e-127 458.8 267 88.8
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 5.0e-127 458.0 267 89.5
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.4e-126 456.4 267 88.4
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 5.5e-126 454.5 264 89.4
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 9.1e-121 437.2 227 98.2
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 2.9e-111 405.6 272 82.0
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 5.0e-103 378.3 270 75.6
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 9.4e-102 374.0 267 73.8
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 4.5e-88 328.6 277 66.8
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 6.6e-87 324.7 217 78.8
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 8.6e-87 324.3 232 74.6
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.5e-86 323.6 230 74.8
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.5e-86 323.6 232 75.0
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.9e-86 323.2 251 69.7
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 7.3e-86 321.2 264 66.7
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 9.5e-86 320.9 267 68.9
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 9.5e-86 320.9 233 75.1
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 9.5e-86 320.9 232 75.0
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 1.2e-85 320.5 197 83.8
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.6e-85 320.1 214 79.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.1e-85 319.7 216 77.3
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.8e-85 319.3 266 68.4
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.0e-85 317.8 263 68.1
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 8.0e-85 317.8 214 78.5
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 8.0e-85 317.8 269 66.9
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.0e-84 317.4 263 68.1
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.0e-84 317.4 206 81.1
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.0e-84 317.4 214 78.0
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.0e-84 317.4 213 78.9
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.4e-84 317.0 232 72.4
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.4e-84 317.0 214 78.0
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 1.4e-84 317.0 227 74.4
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.8e-84 316.6 197 85.3
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.3e-84 316.2 214 78.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 5.2e-84 315.1 197 84.8
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 5.2e-84 315.1 266 65.8
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 6.8e-84 314.7 269 66.5
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 8.9e-84 314.3 232 72.0
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 1.5e-83 313.5 270 65.6
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.0e-83 313.2 268 66.4
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.6e-83 312.8 268 66.0
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 3.4e-83 312.4 236 73.7
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 4.4e-83 312.0 211 78.2
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 5.8e-83 311.6 265 66.0
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 5.8e-83 311.6 241 71.8
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 7.5e-83 311.2 240 70.4
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 7.5e-83 311.2 216 75.9
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 7.5e-83 311.2 216 74.5
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.3e-82 310.5 237 71.3
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.7e-82 310.1 265 67.2
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.2e-82 309.7 230 70.0
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.2e-82 309.7 273 62.6
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 2.9e-82 309.3 188 84.0
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.9e-82 309.3 215 75.8
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 3.7e-82 308.9 193 82.9
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 3.7e-82 308.9 218 76.1
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 4.9e-82 308.5 198 80.3
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 4.9e-82 308.5 268 66.0
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 6.4e-82 308.1 232 73.3
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 6.4e-82 308.1 236 72.0
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 8.3e-82 307.8 271 66.1
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.4e-81 307.0 188 82.4
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-81 307.0 191 83.8
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.4e-81 307.0 263 63.9
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.9e-81 306.6 266 65.4
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.9e-81 306.6 215 76.3
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 3.2e-81 305.8 198 80.3
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 3.2e-81 305.8 198 81.3
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.1e-81 305.4 197 78.7
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 4.1e-81 305.4 271 65.7
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 9.2e-81 304.3 186 83.9
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.0e-80 303.1 205 78.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.0e-80 303.1 271 65.3
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 4.6e-80 302.0 221 74.7
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 4.6e-80 302.0 259 65.6
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 4.6e-80 302.0 193 80.8
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 6.0e-80 301.6 224 73.7
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 7.8e-80 301.2 196 80.6
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 7.8e-80 301.2 196 81.1
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 1.7e-79 300.1 193 80.8
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 2.3e-79 299.7 185 82.7
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.0e-79 299.3 269 62.8
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 3.3e-78 295.8 201 77.6
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 9.5e-78 294.3 191 77.5
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.4e-76 290.4 188 79.8
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.8e-76 290.0 195 75.9
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.1e-76 289.3 226 70.8
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.2e-75 287.3 201 76.1
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 7.5e-75 284.6 190 77.9
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 9.5e-70 267.7 233 63.9
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 4.0e-68 262.3 264 59.1
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 3.4e-67 259.2 221 61.1
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 9.9e-67 257.7 226 64.2
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 1.5e-62 243.8 192 64.1
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 8.9e-60 234.6 201 60.2
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 4.9e-58 228.8 201 57.7
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 4.2e-57 225.7 202 64.9
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.5e-54 217.2 140 79.3
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 9.0e-52 208.0 280 46.8
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 9.9e-51 204.5 203 59.6
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 3.1e-44 183.0 193 50.3
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 3.4e-43 179.5 108 82.4
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.3e-42 177.6 135 68.9
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.7e-42 177.2 184 48.9
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.8e-42 176.0 180 56.1
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.2e-35 154.5 108 66.7
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.1e-33 147.9 230 40.0
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.5e-30 136.7 119 68.9
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 2.7e-24 116.7 71 84.5
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 6.1e-24 115.5 82 69.5
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 4.1e-20 102.8 106 60.4
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 3.9e-15 86.3 46 97.8
BcaB01g05146 Brassica carinata HOM05D039718 ORTHO05D031954 6.7e-15 85.5 102 52.0
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 8.8e-15 85.1 48 81.2
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.3e-13 81.3 78 61.5


User provided reference genes

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