Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p52420 Brassica napus HOM05D001507 ORTHO05D002108 1.2e-95 353.2 186 100.0
BcaC03g17297 Brassica carinata HOM05D001507 ORTHO05D002108 1.3e-78 296.6 158 100.0
BraA09t39840Z Brassica rapa HOM05D001507 ORTHO05D002108 5.1e-78 294.7 165 94.5
A03p24900 Brassica napus HOM05D001507 ORTHO05D002108 1.5e-77 293.1 165 93.9
A07p06890 Brassica napus HOM05D001507 ORTHO05D002108 9.0e-75 283.9 165 92.7
BraA08t34332Z Brassica rapa HOM05D001507 ORTHO05D002108 1.8e-67 259.6 159 90.6
C03p77630 Brassica napus HOM05D001507 ORTHO05D002108 5.0e-65 251.5 165 86.1
BcaC01g00284 Brassica carinata HOM05D001507 ORTHO05D002108 6.5e-65 251.1 165 86.1
A08p23800 Brassica napus HOM05D001507 ORTHO05D002108 1.9e-64 249.6 159 88.7
BolC3t20020H Brassica oleracea HOM05D001507 ORTHO05D002108 2.1e-63 246.1 168 84.5
BcaC03g17098 Brassica carinata HOM05D001507 ORTHO05D002108 1.4e-59 233.4 163 79.8
BcaNung03302 Brassica carinata HOM05D001507 ORTHO05D002108 2.0e-53 213.0 144 82.6
AT4G39140 Arabidopsis thaliana HOM05D001507 ORTHO05D002108 2.6e-53 212.6 165 78.2
AL7G11080 Arabidopsis lyrata HOM05D001507 ORTHO05D002108 3.3e-53 212.2 165 77.6
CARHR247610 Cardamine hirsuta HOM05D001507 ORTHO05D002108 7.0e-51 204.5 165 75.2
Thhalv10025282m.g Eutrema salsugineum HOM05D001507 ORTHO05D002108 1.5e-50 203.4 165 75.2
Sp7g36680 Schrenkiella parvula HOM05D001507 ORTHO05D002108 1.3e-49 200.3 164 74.4
A01p00260 Brassica napus HOM05D001507 ORTHO05D002108 3.9e-46 188.7 173 68.2
BraA01t00033Z Brassica rapa HOM05D001507 ORTHO05D002108 9.1e-43 177.6 184 63.6
C01p00370 Brassica napus HOM05D001507 ORTHO05D002108 1.6e-42 176.8 167 67.7
BolC1t00043H Brassica oleracea HOM05D001507 ORTHO05D002108 1.6e-42 176.8 167 67.7
Carub.0007s0102 Capsella rubella HOM05D001507 ORTHO05D002108 1.6e-42 176.8 165 68.5
BolC7t46746H Brassica oleracea HOM05D001507 ORTHO05D002108 1.5e-40 170.2 173 64.7
Aa31LG6G16120 Aethionema arabicum HOM05D001507 ORTHO05D002108 2.5e-40 169.5 165 64.8
BcaNung01277 Brassica carinata HOM05D001507 ORTHO05D002108 5.5e-40 168.3 175 63.4
BcaB03g12245 Brassica carinata HOM05D001507 ORTHO05D002108 1.4e-38 163.7 179 61.5
THA.LOC104807750 Tarenaya hassleriana HOM05D001507 ORTHO05D002108 2.3e-38 162.9 161 64.0
A06p48680 Brassica napus HOM05D001507 ORTHO05D002108 7.0e-35 151.4 190 57.9
AL4G10680 Arabidopsis lyrata HOM05D001507 ORTHO05D002108 1.2e-34 150.6 159 62.3
THA.LOC104804124 Tarenaya hassleriana HOM05D001507 ORTHO05D002108 1.6e-34 150.2 157 62.4
Aa31LG7G15030 Aethionema arabicum HOM05D001507 ORTHO05D002108 1.1e-32 144.1 162 63.6
BcaC07g41149 Brassica carinata HOM05D001507 ORTHO05D002108 1.1e-32 144.1 159 62.3
CARHR112420 Cardamine hirsuta HOM05D001507 ORTHO05D002108 4.2e-32 142.1 154 63.6
AT2G21500 Arabidopsis thaliana HOM05D001507 ORTHO05D002108 7.2e-32 141.4 160 61.2
Carub.0004s0054 Capsella rubella HOM05D001507 ORTHO05D002108 3.6e-31 139.0 162 59.9
Sp4g00660 Schrenkiella parvula HOM05D001507 ORTHO05D002108 8.0e-31 137.9 159 59.1
Thhalv10000174m.g Eutrema salsugineum HOM05D001507 ORTHO05D002108 1.5e-29 133.7 159 59.7
C08p41480 Brassica napus HOM05D001507 ORTHO05D002108 1.3e-25 120.6 165 53.3
BolC8t51709H Brassica oleracea HOM05D001507 ORTHO05D002108 1.3e-25 120.6 165 53.3
A09p58200 Brassica napus HOM05D001507 ORTHO05D002108 1.9e-24 116.7 164 50.0
BraA09t41208Z Brassica rapa HOM05D001507 ORTHO05D002108 1.9e-24 116.7 164 50.0
BraA06t27735Z Brassica rapa HOM05D001507 ORTHO05D002108 2.8e-23 112.8 183 49.2
Cpa.g.sc106.6 Carica papaya HOM05D001507 ORTHO05D002108 2.3e-22 109.8 175 49.7
Atru.chr5.3080 Acer truncatum HOM05D001507 ORTHO05D002108 5.2e-22 108.6 173 47.4
Duzib052G0846 Durio zibethinus HOM05D001507 ORTHO05D002108 5.2e-22 108.6 172 49.4
BcaNung02355 Brassica carinata HOM05D001507 ORTHO05D002108 2.6e-21 106.3 154 51.3
C07p63350 Brassica napus HOM05D001507 ORTHO05D002108 2.6e-21 106.3 154 51.3
Duzib248G0497 Durio zibethinus HOM05D001507 ORTHO05D002108 7.5e-21 104.8 175 46.9
COL.COLO4_25988 Corchorus olitorius HOM05D001507 ORTHO05D002108 9.8e-21 104.4 172 48.8
Gohir.A13G032500 Gossypium hirsutum HOM05D001507 ORTHO05D002108 1.3e-20 104.0 172 45.9
Potri.004G158400 Populus trichocarpa HOM05D001507 ORTHO05D002108 1.3e-20 104.0 172 47.1
Thecc.02G080600 Theobroma cacao HOM05D001507 ORTHO05D002108 1.3e-20 104.0 172 47.7
Ciclev10028499m.g Citrus clementina HOM05D001507 ORTHO05D002108 1.7e-20 103.6 173 46.8
Gohir.D13G030700 Gossypium hirsutum HOM05D001507 ORTHO05D002108 2.2e-20 103.2 172 45.9
Gorai.013G034900 Gossypium raimondii HOM05D001507 ORTHO05D002108 2.2e-20 103.2 172 45.9
Potri.009G120000 Populus trichocarpa HOM05D001507 ORTHO05D002108 4.9e-20 102.1 177 49.2
Sabra04G0105700 Salix brachista HOM05D001507 ORTHO05D002108 1.1e-19 100.9 172 47.1
Prupe.8G091100 Prunus persica HOM05D001507 ORTHO05D002108 1.8e-19 100.1 175 46.3
CANSAT11G1577 Cannabis sativa HOM05D001507 ORTHO05D002108 1.2e-18 97.4 172 45.3
FAN15G3647 Fragaria x ananassa HOM05D001507 ORTHO05D002108 3.5e-18 95.9 176 46.6
ClCG11G004160 Citrullus lanatus HOM05D001507 ORTHO05D002108 4.5e-18 95.5 175 44.0
BcaB07g33129 Brassica carinata HOM05D001507 ORTHO05D002108 1.0e-17 94.4 59 79.7
RcHm_v2.0_Chr6g0265921 Rosa chinensis HOM05D001507 ORTHO05D002108 1.0e-17 94.4 175 45.7
Sed0002025 Sechium edule HOM05D001507 ORTHO05D002108 1.3e-17 94.0 175 43.4
FAN27G1087 Fragaria x ananassa HOM05D001507 ORTHO05D002108 3.9e-17 92.4 176 46.0
CsaV3_2G015010 Cucumis sativus L. HOM05D001507 ORTHO05D002108 5.0e-17 92.0 175 42.9
MELO3C023321.2 Cucumis melo HOM05D001507 ORTHO05D002108 8.6e-17 91.3 175 42.9
FvH4_2g09590 Fragaria vesca HOM05D001507 ORTHO05D002108 1.5e-16 90.5 176 44.9
TWI31G0979 Tripterygium wilfordii HOM05D001507 ORTHO05D002108 1.5e-16 90.5 171 45.0
QL11p044804 Quercus lobata HOM05D001507 ORTHO05D002108 3.3e-16 89.4 171 45.0
Manes.11G091600 Manihot esculenta HOM05D001507 ORTHO05D002108 4.3e-16 89.0 178 44.9
Cfa005056 Carpinus fangiana HOM05D001507 ORTHO05D002108 5.6e-16 88.6 171 45.0
FAN20G0016 Fragaria x ananassa HOM05D001507 ORTHO05D002108 7.3e-16 88.2 176 44.3
FAN24G3524 Fragaria x ananassa HOM05D001507 ORTHO05D002108 7.3e-16 88.2 176 44.3
QL11p045220 Quercus lobata HOM05D001507 ORTHO05D002108 7.3e-16 88.2 171 44.4
CiPaw.05G069700 Carya illinoinensis HOM05D001507 ORTHO05D002108 9.5e-16 87.8 171 44.4
Duzib132G1074 Durio zibethinus HOM05D001507 ORTHO05D002108 2.8e-15 86.3 170 44.1
Sed0017187 Sechium edule HOM05D001507 ORTHO05D002108 3.6e-15 85.9 175 42.9
TWI79G0980 Tripterygium wilfordii HOM05D001507 ORTHO05D002108 6.1e-15 85.1 158 47.5
MD05G1061300 Malus domestica HOM05D001507 ORTHO05D002108 8.0e-15 84.7 177 41.8
Nitab4.5_0005796g0040 Nicotiana tabacum HOM05D001507 ORTHO05D002108 8.0e-15 84.7 175 42.9
PGR042G3147 Punica granatum HOM05D001507 ORTHO05D002108 1.0e-14 84.3 178 42.7
Eucgr.G01695 Eucalyptus grandis HOM05D001507 ORTHO05D002108 1.8e-14 83.6 177 43.5
Manes.04G087266 Manihot esculenta HOM05D001507 ORTHO05D002108 2.3e-14 83.2 170 44.1
CSS0000665 Camellia sinensis var. sinensis HOM05D001507 ORTHO05D002108 3.1e-14 82.8 169 43.8
MD10G1069100 Malus domestica HOM05D001507 ORTHO05D002108 8.9e-14 81.3 175 40.6
Dinv42039 Davidia involucrata HOM05D001507 ORTHO05D002108 1.2e-13 80.9 169 41.4
Nitab4.5_0003234g0130 Nicotiana tabacum HOM05D001507 ORTHO05D002108 1.5e-13 80.5 175 42.3
PGSC0003DMG400025731 Solanum tuberosum HOM05D001507 ORTHO05D002108 2.0e-13 80.1 168 42.9
Peaxi162Scf00016g00428 Petunia axillaris HOM05D001507 ORTHO05D002108 7.5e-13 78.2 167 43.1
VMungo1309G2485 Vigna mungo HOM05D001507 ORTHO05D002108 9.8e-13 77.8 172 39.0
Lj5A193T105 Lonicera japonica HOM05D001507 ORTHO05D002108 1.3e-12 77.4 182 41.2
Solyc10g054030.2 Solanum lycopersicum HOM05D001507 ORTHO05D002108 1.3e-12 77.4 167 42.5
Nitab4.5_0005128g0060 Nicotiana tabacum HOM05D001507 ORTHO05D002108 1.7e-12 77.0 170 42.9
Glyma.04G010000 Glycine max HOM05D001507 ORTHO05D002108 2.2e-12 76.6 172 39.0
Medtr8g037750 Medicago truncatula HOM05D001507 ORTHO05D002108 2.9e-12 76.3 169 39.6
Sopen10g023880 Solanum pennellii HOM05D001507 ORTHO05D002108 2.9e-12 76.3 168 41.7
Solyc01g109910.4 Solanum lycopersicum HOM05D001507 ORTHO05D002108 3.7e-12 75.9 168 41.7
Cc02_g17280 Coffea canephora HOM05D001507 ORTHO05D002108 6.4e-12 75.1 133 45.9
Phvul.009G005500 Phaseolus vulgaris HOM05D001507 ORTHO05D002108 6.4e-12 75.1 171 38.0
Ca_23905_v3 Cicer arietinum L. HOM05D001507 ORTHO05D002108 8.3e-12 74.7 169 39.6
BcaB03g11583 Brassica carinata HOM05D001507 ORTHO05D002108 2.4e-11 73.2 77 57.1
DCAR_023013 Daucus carota HOM05D001507 ORTHO05D002108 2.4e-11 73.2 172 40.7
Hma1.2p1_0851F.1_g228430 Hydrangea macrophylla HOM05D001507 ORTHO05D002108 2.4e-11 73.2 194 38.7
Lj1g0004522 Lotus japonicus HOM05D001507 ORTHO05D002108 3.2e-11 72.8 171 39.8
Lalb_Chr01g0007971 Lupinus albus HOM05D001507 ORTHO05D002108 5.4e-11 72.0 175 38.3
Peaxi162Scf00003g00728 Petunia axillaris HOM05D001507 ORTHO05D002108 5.4e-11 72.0 167 40.1
Gohir.A12G042500 Gossypium hirsutum HOM05D001507 ORTHO05D002108 7.0e-11 71.6 135 44.4
Sopen01g052100 Solanum pennellii HOM05D001507 ORTHO05D002108 9.2e-11 71.2 167 40.1
SalBow6G6824 Salvia bowleyana HOM05D001507 ORTHO05D002108 1.6e-10 70.5 133 42.9
Actinidia00547 Actinidia chinensis HOM05D001507 ORTHO05D002108 2.0e-10 70.1 170 40.0
Lalb_Chr19g0132301 Lupinus albus HOM05D001507 ORTHO05D002108 2.7e-10 69.7 177 36.2
Glyma.06G009900 Glycine max HOM05D001507 ORTHO05D002108 3.5e-10 69.3 172 38.4
Nitab4.5_0001317g0180 Nicotiana tabacum HOM05D001507 ORTHO05D002108 4.6e-10 68.9 165 41.2
TPR.G1857 Trifolium pratense HOM05D001507 ORTHO05D002108 7.8e-10 68.2 169 37.9
Lalb_Chr03g0032911 Lupinus albus HOM05D001507 ORTHO05D002108 1.0e-09 67.8 172 39.5
Glyma.13G201200 Glycine max HOM05D001507 ORTHO05D002108 1.3e-09 67.4 176 36.4
Gorai.008G030700 Gossypium raimondii HOM05D001507 ORTHO05D002108 1.7e-09 67.0 111 45.9
Lj3g0000522 Lotus japonicus HOM05D001507 ORTHO05D002108 1.7e-09 67.0 171 36.3
Gohir.D12G029800 Gossypium hirsutum HOM05D001507 ORTHO05D002108 3.0e-09 66.2 111 45.9
Lj9C377G11 Lonicera japonica HOM05D001507 ORTHO05D002108 3.0e-09 66.2 184 37.5
Haze_02327 Corylus avellana HOM05D001507 ORTHO05D002108 3.9e-09 65.9 61 60.7
VMungo1127G1642 Vigna mungo HOM05D001507 ORTHO05D002108 5.0e-09 65.5 170 33.5
arahy.Tifrunner.gnm1.ann1.PIWT4D Arachis hypogaea HOM05D001507 ORTHO05D002108 8.6e-09 64.7 172 36.6
arahy.Tifrunner.gnm1.ann1.V5R7Y7 Arachis hypogaea HOM05D001507 ORTHO05D002108 8.6e-09 64.7 172 36.6
MSTRG.20062 Avicennia marina HOM05D001507 ORTHO05D002108 8.6e-09 64.7 133 42.1
Sed0016001 Sechium edule HOM05D001507 ORTHO05D002108 1.1e-08 64.3 176 38.1
HanXRQChr10g0307031 Helianthus annuus HOM05D001507 ORTHO05D002108 1.9e-08 63.5 168 38.1
Phvul.011G210200 Phaseolus vulgaris HOM05D001507 ORTHO05D002108 1.9e-08 63.5 173 35.3
ECA234G4758 Erigeron canadensis HOM05D001507 ORTHO05D002108 2.5e-08 63.2 164 37.8
PGSC0003DMG400038651 Solanum tuberosum HOM05D001507 ORTHO05D002108 2.5e-08 63.2 182 36.3
CiPaw.06G132600 Carya illinoinensis HOM05D001507 ORTHO05D002108 4.3e-08 62.4 135 43.0
Oeu020732.1 Olea europaea HOM05D001507 ORTHO05D002108 4.3e-08 62.4 170 40.0
Psat5g005480 Pisum sativum HOM05D001507 ORTHO05D002108 5.6e-08 62.0 156 37.2
Oeu055612.1 Olea europaea HOM05D001507 ORTHO05D002108 9.5e-08 61.2 132 43.9
Glyma.12G235700 Glycine max HOM05D001507 ORTHO05D002108 1.2e-07 60.8 173 35.3
Sed0021711 Sechium edule HOM05D001507 ORTHO05D002108 1.2e-07 60.8 138 40.6
DCAR_028968 Daucus carota HOM05D001507 ORTHO05D002108 1.6e-07 60.5 199 34.7
Psat4g148120 Pisum sativum HOM05D001507 ORTHO05D002108 1.6e-07 60.5 169 35.5
Sabra09G0092300 Salix brachista HOM05D001507 ORTHO05D002108 1.6e-07 60.5 62 56.5
PGSC0003DMG400010975 Solanum tuberosum HOM05D001507 ORTHO05D002108 2.8e-07 59.7 75 50.7
ClCG02G004780 Citrullus lanatus HOM05D001507 ORTHO05D002108 3.6e-07 59.3 147 40.1
MELO3C013445.2 Cucumis melo HOM05D001507 ORTHO05D002108 3.6e-07 59.3 148 38.5
Medtr3g117180 Medicago truncatula HOM05D001507 ORTHO05D002108 4.7e-07 58.9 143 38.5
Sc08g0000650 Simmondsia chinensis HOM05D001507 ORTHO05D002108 4.7e-07 58.9 167 38.9
ECA236G2631 Erigeron canadensis HOM05D001507 ORTHO05D002108 1.1e-06 57.8 180 37.8
Lsat_1_v5_gn_7_91580 Lactuca sativa HOM05D001507 ORTHO05D002108 1.1e-06 57.8 178 33.7
GSVIVG01023822001 Vitis vinifera HOM05D001507 ORTHO05D002108 1.4e-06 57.4 185 34.6
Actinidia02230 Actinidia chinensis HOM05D001507 ORTHO05D002108 2.3e-06 56.6 148 37.2
AUR62011288 Chenopodium quinoa HOM05D001507 ORTHO05D002108 2.3e-06 56.6 154 35.1
CsaV3_7G000130 Cucumis sativus L. HOM05D001507 ORTHO05D002108 2.3e-06 56.6 171 33.9
Migut.B00210 Erythranthe guttata HOM05D001507 ORTHO05D002108 3.1e-06 56.2 169 34.9
Oeu061223.1 Olea europaea HOM05D001507 ORTHO05D002108 4.0e-06 55.8 163 40.5
Rhsim05G0071200 Rhododendron simsii HOM05D001507 ORTHO05D002108 5.2e-06 55.5 171 38.0


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