Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17283 Brassica carinata HOM05D010662 ORTHO05D012734 5.8e-52 207.2 101 100.0
C02p52300 Brassica napus HOM05D010662 ORTHO05D012734 5.8e-52 207.2 101 100.0
A02p33980 Brassica napus HOM05D010662 ORTHO05D012734 1.6e-46 189.1 98 93.9
BcaB07g30260 Brassica carinata HOM05D010662 ORTHO05D012734 1.8e-45 185.7 101 89.1
BolC2t11312H Brassica oleracea HOM05D010662 ORTHO05D012734 6.9e-45 183.7 91 100.0
BraA02t08416Z Brassica rapa HOM05D010662 ORTHO05D012734 2.9e-43 178.3 91 96.7
Thhalv10005200m.g Eutrema salsugineum HOM05D010662 ORTHO05D012734 2.2e-35 152.1 91 80.2
A06p42620 Brassica napus HOM05D010662 ORTHO05D012734 2.3e-32 142.1 91 76.9
BraA06t27177Z Brassica rapa HOM05D010662 ORTHO05D012734 2.3e-32 142.1 91 76.9
C07p34520 Brassica napus HOM05D010662 ORTHO05D012734 1.6e-30 136.0 92 76.1
BolC7t43983H Brassica oleracea HOM05D010662 ORTHO05D012734 1.6e-30 136.0 92 76.1
BcaC06g33971 Brassica carinata HOM05D010662 ORTHO05D012734 3.4e-28 128.3 84 76.2
AT3G25655 Arabidopsis thaliana HOM05D010662 ORTHO05D012734 3.2e-26 121.7 91 70.3
C07p34490 Brassica napus HOM05D010662 ORTHO05D012734 1.2e-25 119.8 77 77.9
BolC7t43981H Brassica oleracea HOM05D010662 ORTHO05D012734 1.2e-25 119.8 77 77.9
Carub.0005s0347 Capsella rubella HOM05D010662 ORTHO05D012734 1.5e-23 112.8 84 70.2
CARHR146630 Cardamine hirsuta HOM05D010662 ORTHO05D012734 3.3e-23 111.7 91 64.8
AL5G14190 Arabidopsis lyrata HOM05D010662 ORTHO05D012734 3.1e-21 105.1 85 68.2
THA.LOC104805239 Tarenaya hassleriana HOM05D010662 ORTHO05D012734 1.1e-10 70.1 84 51.2
Aa31LG2G6660 Aethionema arabicum HOM05D010662 ORTHO05D012734 4.7e-09 64.7 85 47.1
Prupe.1G303500 Prunus persica HOM05D008579 ORTHO05D010245 5.2e-08 61.2 101 38.6
Glyma.01G090400 Glycine max HOM05D008579 ORTHO05D010245 6.7e-08 60.8 91 44.0
Glyma.02G131300 Glycine max HOM05D008579 ORTHO05D010245 7.5e-07 57.4 90 37.8
Nn4g23678 Nelumbo nucifera HOM05D008579 ORTHO05D010245 6.3e-06 54.3 77 36.4
Eucgr.G02368 Eucalyptus grandis HOM05D008579 ORTHO05D010245 8.2e-06 53.9 74 40.5
RcHm_v2.0_Chr4g0436131 Rosa chinensis HOM05D008579 ORTHO05D010245 8.2e-06 53.9 73 45.2
Sed0027044 Sechium edule HOM05D008579 ORTHO05D010245 8.2e-06 53.9 75 36.0


User provided reference genes

Program Settings