Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p52240 Brassica napus HOM05D001200 ORTHO05D009778 7.9e-86 320.5 170 100.0
C07p33450 Brassica napus HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
C09p40190 Brassica napus HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BolC2t10596H Brassica oleracea HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BolC9t56923H Brassica oleracea HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BolSC35t60704H Brassica oleracea HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BolSC37t60793H Brassica oleracea HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BolSC44t60822H Brassica oleracea HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BolSC46t60958H Brassica oleracea HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BolSC47t61065H Brassica oleracea HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BraA10t43432Z Brassica rapa HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
BraSC59t46551Z Brassica rapa HOM05D001200 ORTHO05D009778 4.9e-27 125.2 104 73.1
AL9U11954 Arabidopsis lyrata HOM05D001200 ORTHO05D009778 3.2e-26 122.5 104 71.2
ATCG01070 Arabidopsis thaliana HOM05D001200 ORTHO05D009778 1.6e-25 120.2 104 70.2
BolC6t36203H Brassica oleracea HOM05D001200 ORTHO05D009778 6.0e-25 118.2 104 69.2
PGR111G0025 Punica granatum HOM05D001200 ORTHO05D009778 1.3e-24 117.1 104 70.2
CAN.G1526.7 Capsicum annuum HOM05D001200 ORTHO05D009778 3.0e-24 115.9 104 69.2
CAN.G278.3 Capsicum annuum HOM05D001200 ORTHO05D009778 3.0e-24 115.9 104 69.2
PGSC0003DMG402011339 Solanum tuberosum HOM05D001200 ORTHO05D009778 3.0e-24 115.9 104 69.2
DCAR_032538 Daucus carota HOM05D001200 ORTHO05D009778 1.1e-23 114.0 104 68.3
Gohir.1Z049531 Gossypium hirsutum HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
Gohir.A02G134500 Gossypium hirsutum HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
Gohir.A04G053130 Gossypium hirsutum HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
Gohir.A09G040995 Gossypium hirsutum HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQChr00c0336g0573661 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.9e-23 113.2 104 68.3
HanXRQChr05g0152441 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQChr09g0258511 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQChr11g0323751 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQChr15g0465441 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQChr15g0465451 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQChr17g0569731 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.9e-23 113.2 104 68.3
Hma1.2p1_0656F.1_g196803 Hydrangea macrophylla HOM05D001200 ORTHO05D009778 1.9e-23 113.2 104 68.3
Nn064s42210 Nelumbo nucifera HOM05D001200 ORTHO05D009778 5.6e-23 111.7 104 67.3
CAN.G965.6 Capsicum annuum HOM05D001200 ORTHO05D009778 7.3e-23 111.3 101 69.3
RcHm_v2.0_Chr5g0017211 Rosa chinensis HOM05D001200 ORTHO05D009778 7.3e-23 111.3 104 67.3
RcHm_v2.0_CPg0502771 Rosa chinensis HOM05D001200 ORTHO05D009778 7.3e-23 111.3 104 67.3
HanXRQChr02g0040741 Helianthus annuus HOM05D001200 ORTHO05D009778 9.6e-23 110.9 104 67.3
Nn1g08634 Nelumbo nucifera HOM05D001200 ORTHO05D009778 2.1e-22 109.8 104 65.4
RcHm_v2.0_Chr5g0043031 Rosa chinensis HOM05D001200 ORTHO05D009778 2.1e-22 109.8 104 66.3
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 2.8e-22 109.4 104 66.3
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.8e-22 109.4 104 66.3
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.8e-22 109.4 104 66.3
Sed0017608 Sechium edule HOM05D000533 ORTHO05D006151 4.7e-22 108.6 104 64.4
Migut.D01252 Erythranthe guttata HOM05D001200 ORTHO05D009778 6.2e-22 108.2 104 65.4
Lalb_Chr07g0191771 Lupinus albus HOM05D001200 ORTHO05D009778 6.2e-22 108.2 104 66.3
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 6.2e-22 108.2 104 65.4
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 6.2e-22 108.2 104 65.4
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 6.2e-22 108.2 104 65.4
PSO548G0037 Papaver somniferum HOM05D001200 ORTHO05D009778 6.2e-22 108.2 99 67.7
Gohir.D04G175000 Gossypium hirsutum HOM05D001200 ORTHO05D009778 1.4e-21 107.1 104 65.4
SEGI_22361 Sequoiadendron giganteum HOM05D001200 ORTHO05D009778 2.4e-21 106.3 103 62.1
HanXRQChr13g0393091 Helianthus annuus HOM05D001200 ORTHO05D009778 4.0e-21 105.5 104 64.4
Gohir.A08G113700 Gossypium hirsutum HOM05D001200 ORTHO05D009778 2.0e-20 103.2 104 65.4
Nn1g00558 Nelumbo nucifera HOM05D001200 ORTHO05D009778 3.4e-20 102.4 104 62.5
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 9.9e-20 100.9 96 65.6
MBI10_g47593_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 9.9e-20 100.9 96 65.6
Lalb_Chr19g0127811 Lupinus albus HOM05D001200 ORTHO05D009778 1.3e-19 100.5 103 65.0
Gohir.A01G112200 Gossypium hirsutum HOM05D001200 ORTHO05D009778 1.7e-19 100.1 101 61.4
EL10As15g24099 Beta vulgaris HOM05D001200 ORTHO05D009778 2.2e-19 99.8 95 66.3
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.2e-19 99.8 95 66.3
CARHR282440 Cardamine hirsuta HOM05D001200 ORTHO05D009778 2.2e-19 99.8 100 63.0
Nitab4.5_0001313g0070 Nicotiana tabacum HOM05D001200 ORTHO05D009778 2.2e-19 99.8 93 66.7
Gohir.D13G164800 Gossypium hirsutum HOM05D001200 ORTHO05D009778 3.8e-19 99.0 104 60.6
Nitab4.5_0007979g0060 Nicotiana tabacum HOM05D001200 ORTHO05D009778 9.3e-18 94.4 100 62.0
Manes.17G012600 Manihot esculenta HOM05D001200 ORTHO05D009778 1.2e-17 94.0 104 58.7
LjContig00318g0024402 Lotus japonicus HOM05D001200 ORTHO05D009778 6.0e-17 91.7 94 63.8
LjContig00319g0019579 Lotus japonicus HOM05D001200 ORTHO05D009778 6.0e-17 91.7 94 63.8
HanXRQChr10g0289681 Helianthus annuus HOM05D001200 ORTHO05D009778 1.0e-16 90.9 94 61.7
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 2.3e-16 89.7 87 63.2
HanXRQChr09g0246681 Helianthus annuus HOM05D001200 ORTHO05D009778 1.9e-15 86.7 93 60.2
Lj2g0021700 Lotus japonicus HOM05D001200 ORTHO05D009778 5.6e-15 85.1 94 61.7
BraSC103t45429Z Brassica rapa HOM05D001200 ORTHO05D009778 4.0e-13 79.0 72 65.3
BolSC45t60909H Brassica oleracea HOM05D001200 ORTHO05D009778 5.3e-13 78.6 70 67.1
Glyma.08G367600 Glycine max HOM05D001200 ORTHO05D009778 1.9e-10 70.1 91 53.8
Eucgr.L00013 Eucalyptus grandis HOM05D001200 ORTHO05D009778 4.2e-10 68.9 94 52.1
arahy.Tifrunner.gnm1.ann1.DP5I98 Arachis hypogaea HOM05D001200 ORTHO05D009778 7.1e-10 68.2 80 56.2
BolSC29t60506H Brassica oleracea HOM05D001200 ORTHO05D009778 9.3e-10 67.8 57 70.2
BraSC179t45774Z Brassica rapa HOM05D001200 ORTHO05D009778 9.3e-10 67.8 57 70.2
HanXRQChr17g0557751 Helianthus annuus HOM05D001200 ORTHO05D009778 2.7e-09 66.2 71 59.2
HanXRQChr17g0569741 Helianthus annuus HOM05D001200 ORTHO05D009778 2.7e-09 66.2 71 59.2
Lsat_1_v5_gn_1_14180 Lactuca sativa HOM05D001200 ORTHO05D009713 2.7e-09 66.2 53 69.8
Nn3g20216 Nelumbo nucifera HOM05D001200 ORTHO05D009778 2.7e-09 66.2 59 67.8
Phvul.011G095700 Phaseolus vulgaris HOM05D001200 ORTHO05D009778 2.7e-09 66.2 72 56.9
HanXRQChr02g0038671 Helianthus annuus HOM05D001200 ORTHO05D009778 7.9e-09 64.7 71 57.7
Lsat_1_v5_gn_6_54101 Lactuca sativa HOM05D001200 ORTHO05D009778 1.0e-08 64.3 75 57.3
HanXRQChr02g0038711 Helianthus annuus HOM05D001200 ORTHO05D009778 1.8e-08 63.5 67 59.7
TPR.G17270 Trifolium pratense HOM05D001200 ORTHO05D009778 1.8e-08 63.5 57 66.7
C09p24640 Brassica napus HOM05D001200 ORTHO05D009778 1.1e-07 60.8 52 69.2
BolSC29t60546H Brassica oleracea HOM05D001200 ORTHO05D009778 1.1e-07 60.8 52 69.2
Glyma.18G155400 Glycine max HOM05D001200 ORTHO05D009778 1.9e-07 60.1 82 52.4
BolSC35t60692H Brassica oleracea HOM05D001200 ORTHO05D009778 4.3e-07 58.9 51 68.6
BraSC143t45660Z Brassica rapa HOM05D001200 ORTHO05D009778 4.3e-07 58.9 37 83.8
BolSC49t61143H Brassica oleracea HOM05D001200 ORTHO05D009778 5.6e-07 58.5 53 69.8
Nn3g19076 Nelumbo nucifera HOM05D001200 ORTHO05D009778 1.3e-06 57.4 78 55.1
PGSC0003DMG400026713 Solanum tuberosum HOM05D001200 ORTHO05D009778 2.1e-06 56.6 78 53.8
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 2.8e-06 56.2 65 56.9
HanXRQChr08g0231311 Helianthus annuus HOM05D001200 ORTHO05D009778 8.1e-06 54.7 64 59.4


User provided reference genes

Program Settings