Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-54 213.8 109 100.0
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-53 211.8 108 100.0
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-53 211.8 108 100.0
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-53 211.8 108 100.0
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-53 211.8 108 100.0
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-53 211.8 108 100.0
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-53 211.8 108 100.0
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-53 211.8 108 100.0
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 7.4e-53 210.3 108 99.1
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 7.4e-53 210.3 108 99.1
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 7.4e-53 210.3 108 99.1
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 9.7e-53 209.9 108 99.1
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 9.7e-53 209.9 108 99.1
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-52 209.5 108 99.1
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-52 209.1 108 98.1
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 2.2e-52 208.8 108 98.1
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-52 208.8 108 98.1
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-52 208.8 108 98.1
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 2.2e-52 208.8 108 99.1
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 3.7e-52 208.0 108 98.1
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-52 208.0 108 98.1
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-52 208.0 108 97.2
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 3.7e-52 208.0 108 98.1
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 3.7e-52 208.0 108 98.1
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 6.3e-52 207.2 108 98.1
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 6.3e-52 207.2 108 98.1
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-52 207.2 108 98.1
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-52 207.2 108 97.2
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 8.2e-52 206.8 108 96.3
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 8.2e-52 206.8 108 97.2
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-51 206.5 108 97.2
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-51 206.5 108 97.2
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-51 206.5 108 96.3
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-51 206.5 108 98.1
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-51 206.5 108 97.2
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-51 205.7 108 97.2
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 3.1e-51 204.9 108 98.1
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 3.1e-51 204.9 108 97.2
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 3.1e-51 204.9 108 98.1
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 3.1e-51 204.9 108 98.1
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 4.1e-51 204.5 108 95.4
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 4.1e-51 204.5 108 95.4
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 4.1e-51 204.5 108 96.3
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 4.1e-51 204.5 108 95.4
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-50 203.0 108 95.4
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-50 202.6 108 98.1
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-50 202.6 108 98.1
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 1.5e-50 202.6 108 98.1
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 2.6e-50 201.8 108 95.4
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-50 201.8 108 95.4
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 4.5e-50 201.1 105 98.1
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 7.7e-50 200.3 108 94.4
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-49 199.5 108 96.3
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-48 195.7 108 92.6
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 4.2e-48 194.5 102 96.1
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 6.7e-46 187.2 105 92.4
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-45 186.4 108 89.8
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 9.7e-45 183.3 106 88.7
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 3.1e-43 178.3 95 97.9
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 5.3e-43 177.6 104 89.4
C07p21330 Brassica napus HOM05D003591 ORTHO05D005681 6.5e-41 170.6 92 96.7
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 9.4e-40 166.8 107 78.5
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 3.6e-39 164.9 87 96.6
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 4.7e-39 164.5 108 74.1
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 2.3e-38 162.2 107 77.6
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 2.3e-38 162.2 108 78.7
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-38 160.6 108 77.8
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-37 159.5 108 77.8
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 1.5e-37 159.5 108 77.8
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 1.5e-37 159.5 108 77.8
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 1.5e-37 159.5 108 77.8
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 2.0e-37 159.1 108 77.8
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 3.3e-37 158.3 108 76.9
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 3.3e-37 158.3 108 75.9
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-37 157.9 104 78.8
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-37 157.9 104 78.8
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-37 157.9 104 78.8
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 4.4e-37 157.9 108 76.9
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 4.4e-37 157.9 108 76.9
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-37 157.1 108 76.9
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-37 157.1 104 77.9
C04p40830 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-37 157.1 88 95.5
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-36 156.0 108 72.2
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 2.8e-36 155.2 108 75.9
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 2.8e-36 155.2 108 75.9
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 2.8e-36 155.2 108 76.9
C07p11480 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-36 154.8 82 98.8
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 8.2e-36 153.7 108 69.4
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-35 153.3 108 78.7
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-35 152.1 108 70.4
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 7.0e-35 150.6 108 77.8
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 2.0e-34 149.1 99 79.8
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 4.5e-34 147.9 105 77.1
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-33 146.7 108 68.5
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 2.2e-33 145.6 108 66.7
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 2.2e-33 145.6 76 97.4
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-33 144.8 104 77.9
BolC6t38533H Brassica oleracea HOM05D003591 ORTHO05D005681 5.0e-33 144.4 76 98.7
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 5.0e-33 144.4 99 77.8
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-32 142.9 108 67.6
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 4.2e-32 141.4 107 67.3
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 4.2e-32 141.4 108 66.7
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 4.2e-32 141.4 108 64.8
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 7.2e-32 140.6 108 64.8
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 7.2e-32 140.6 108 64.8
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 9.4e-32 140.2 108 70.4
BolC8t47808H Brassica oleracea HOM05D003591 ORTHO05D005681 9.4e-32 140.2 77 96.1
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-31 139.8 108 67.6
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 2.7e-31 138.7 108 64.8
BcaC07g37492 Brassica carinata HOM05D003591 ORTHO05D005681 2.7e-31 138.7 77 94.8
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 3.6e-31 138.3 101 69.3
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 4.7e-31 137.9 108 62.0
BolC4t25666H Brassica oleracea HOM05D003591 ORTHO05D005681 4.7e-31 137.9 77 96.1
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 8.0e-31 137.1 108 64.8
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 8.0e-31 137.1 108 63.9
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-30 136.7 108 65.7
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 2.3e-30 135.6 98 69.4
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 4.0e-30 134.8 107 65.4
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 4.0e-30 134.8 108 63.0
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 4.0e-30 134.8 108 63.0
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 6.8e-30 134.0 108 63.0
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 1.2e-29 133.3 108 62.0
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 1.5e-29 132.9 107 64.5
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 2.6e-29 132.1 108 61.1
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 2.6e-29 132.1 108 61.1
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 2.6e-29 132.1 108 61.1
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 3.4e-29 131.7 108 61.1
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 5.7e-29 131.0 108 61.1
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 5.7e-29 131.0 108 61.1
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 7.5e-29 130.6 98 65.3
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 7.5e-29 130.6 108 60.2
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 1.3e-28 129.8 108 61.1
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 2.8e-28 128.6 68 98.5
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 6.3e-28 127.5 108 59.3
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 9.1e-27 123.6 101 61.4
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 9.1e-27 123.6 107 61.7
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 1.2e-26 123.2 81 80.2
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 1.2e-26 123.2 81 80.2
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 4.5e-26 121.3 68 92.6
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 4.5e-26 121.3 108 64.8
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 1.3e-25 119.8 99 61.6
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 2.3e-25 119.0 96 67.7
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 2.3e-25 119.0 108 62.0
BraA06t23871Z Brassica rapa HOM05D003591 ORTHO05D005681 2.9e-25 118.6 78 79.5
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-25 118.2 108 63.9
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 6.5e-25 117.5 108 61.1
BcaB04g18233 Brassica carinata HOM05D003591 ORTHO05D005681 8.6e-25 117.1 92 66.3
A06p20300 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-23 112.5 79 77.2
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 4.7e-23 111.3 108 61.1
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 2.3e-22 109.0 71 78.9
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-22 108.6 108 55.6
BcaC09g48473 Brassica carinata HOM05D003591 ORTHO05D092369 5.2e-22 107.8 76 75.0
C02p44880 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-22 107.8 54 100.0
BcaB05g24917 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-21 106.7 75 72.0
BcaB05g23044 Brassica carinata HOM05D003591 ORTHO05D005681 4.4e-21 104.8 82 65.9
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 7.5e-21 104.0 53 94.3
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 9.8e-21 103.6 74 67.6
BcaB04g18052 Brassica carinata HOM05D003591 ORTHO05D023905 2.2e-20 102.4 78 66.7
BcaB04g18191 Brassica carinata HOM05D003591 ORTHO05D023905 4.1e-19 98.2 77 62.3
BcaNung06545 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-18 96.7 84 64.3
A05p23640 Brassica napus HOM05D003591 ORTHO05D005681 4.5e-18 94.7 51 94.1
BraA05t21231Z Brassica rapa HOM05D003591 ORTHO05D005681 4.5e-18 94.7 51 94.1
BcaB06g26777 Brassica carinata HOM05D003591 ORTHO05D023905 2.3e-17 92.4 77 58.4
BolC8t50331H Brassica oleracea HOM05D003591 ORTHO05D005681 1.9e-16 89.4 100 57.0
BcaB04g17398 Brassica carinata HOM05D003591 ORTHO05D091303 7.3e-16 87.4 67 64.2
BcaB05g23446 Brassica carinata HOM05D003591 ORTHO05D023905 2.1e-15 85.9 64 64.1
BcaC03g14227 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-15 85.9 53 79.2
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 4.7e-15 84.7 91 53.8
BcaC07g40267 Brassica carinata HOM05D003591 ORTHO05D005681 6.1e-15 84.3 53 77.4
A09p40910 Brassica napus HOM05D003591 ORTHO05D099409 3.0e-14 82.0 54 81.5
A05p23340 Brassica napus HOM05D003591 ORTHO05D015527 6.8e-14 80.9 92 50.0
A05p31230 Brassica napus HOM05D003591 ORTHO05D100173 8.9e-14 80.5 78 61.5
BcaB04g18787 Brassica carinata HOM05D003591 ORTHO05D095528 1.2e-13 80.1 63 63.5
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 2.4e-11 72.4 103 38.8
BcaB07g32445 Brassica carinata HOM05D003591 ORTHO05D023905 1.2e-10 70.1 46 69.6
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-10 67.8 46 67.4
BolC7t43136H Brassica oleracea HOM05D003591 ORTHO05D042843 6.0e-10 67.8 33 97.0
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 1.3e-09 66.6 103 38.8
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 3.9e-09 65.1 48 64.6
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 3.9e-09 65.1 48 64.6
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 3.9e-09 65.1 48 64.6
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 5.0e-09 64.7 103 37.9
BcaB07g33924 Brassica carinata HOM05D006890 ORTHO05D009907 6.6e-09 64.3 93 45.2
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 8.6e-09 63.9 103 36.9
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 3.3e-08 62.0 98 37.8
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 3.3e-08 62.0 98 37.8
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 3.3e-08 62.0 48 62.5
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 4.3e-08 61.6 102 35.3
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 1.6e-07 59.7 48 60.4
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 1.6e-07 59.7 48 60.4
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 3.6e-07 58.5 38 71.1
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 3.6e-07 58.5 96 37.5
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 3.6e-07 58.5 96 37.5
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 4.7e-07 58.2 98 36.7
A03p67750 Brassica napus HOM05D003591 ORTHO05D015462 4.7e-07 58.2 48 58.3
BraA07t28411Z Brassica rapa HOM05D003591 ORTHO05D015462 4.7e-07 58.2 48 58.3
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 6.2e-07 57.8 96 37.5
BraSC36t46093Z Brassica rapa HOM05D003591 ORTHO05D015527 6.2e-07 57.8 47 59.6
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 3.1e-06 55.5 106 32.1
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 6.8e-06 54.3 107 32.7
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 6.8e-06 54.3 107 32.7


User provided reference genes

Program Settings