Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p50890 Brassica napus HOM05D029734 ORTHO05D027661 3.0e-18 94.0 42 100.0
BolC2t11179H Brassica oleracea HOM05D029734 ORTHO05D027661 3.0e-18 94.0 42 100.0
BcaC03g17166 Brassica carinata HOM05D029734 ORTHO05D027661 4.5e-14 80.1 36 100.0
BraA02t08332Z Brassica rapa HOM05D029734 ORTHO05D027661 4.9e-13 76.6 36 94.4
AL5G11990 Arabidopsis lyrata HOM05D000940 ORTHO05D000782 4.2e-12 73.6 40 80.0
BcaC06g31217 Brassica carinata HOM05D000940 ORTHO05D000782 7.1e-12 72.8 40 75.0
AT2G02780 Arabidopsis thaliana HOM05D000940 ORTHO05D000782 9.3e-12 72.4 40 77.5
Thhalv10003702m.g Eutrema salsugineum HOM05D000940 ORTHO05D000782 1.2e-11 72.0 40 75.0
Carub.0005s0169 Capsella rubella HOM05D000940 ORTHO05D000782 2.1e-11 71.2 40 77.5
BcaC06g34041 Brassica carinata HOM05D000940 ORTHO05D000782 6.0e-11 69.7 40 72.5
C07p33380 Brassica napus HOM05D000940 ORTHO05D000782 6.0e-11 69.7 40 72.5
BolC7t43847H Brassica oleracea HOM05D000940 ORTHO05D000782 6.0e-11 69.7 40 72.5
Sp2g13880 Schrenkiella parvula HOM05D000940 ORTHO05D000782 1.0e-10 68.9 39 76.9
Aa31LG2G7490 Aethionema arabicum HOM05D000940 ORTHO05D000782 1.8e-10 68.2 39 76.9
A06p43490 Brassica napus HOM05D000940 ORTHO05D000782 6.7e-10 66.2 39 71.8
BraA06t27234Z Brassica rapa HOM05D000940 ORTHO05D000782 6.7e-10 66.2 39 71.8
CARHR145220 Cardamine hirsuta HOM05D000940 ORTHO05D000782 6.7e-10 66.2 40 70.0
Aa31LG1G660 Aethionema arabicum HOM05D000940 ORTHO05D000782 1.6e-08 61.6 40 67.5
Sp1g12760 Schrenkiella parvula HOM05D000940 ORTHO05D000782 2.1e-08 61.2 40 70.0
BcaC05g25341 Brassica carinata HOM05D000940 ORTHO05D000782 2.8e-08 60.8 40 70.0
C05p12210 Brassica napus HOM05D000940 ORTHO05D000782 2.8e-08 60.8 40 70.0
BolC5t29973H Brassica oleracea HOM05D000940 ORTHO05D000782 2.8e-08 60.8 40 70.0
BcaB02g06491 Brassica carinata HOM05D000940 ORTHO05D000782 4.8e-08 60.1 40 70.0
AL1G26280 Arabidopsis lyrata HOM05D000940 ORTHO05D000782 6.2e-08 59.7 40 67.5
AT1G14390 Arabidopsis thaliana HOM05D000940 ORTHO05D000782 2.4e-07 57.8 40 65.0
Carub.0001s1409 Capsella rubella HOM05D000940 ORTHO05D000782 2.4e-07 57.8 40 65.0
Thhalv10006929m.g Eutrema salsugineum HOM05D000940 ORTHO05D000782 3.1e-07 57.4 40 65.0
CARHR014830 Cardamine hirsuta HOM05D000940 ORTHO05D000782 4.0e-07 57.0 39 66.7
BraA06t24222Z Brassica rapa HOM05D000940 ORTHO05D000782 5.3e-07 56.6 39 69.2
THA.LOC104801787 Tarenaya hassleriana HOM05D000940 ORTHO05D000782 9.0e-07 55.8 39 61.5


User provided reference genes

Program Settings