Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p50710 Brassica napus HOM05D004406 ORTHO05D005660 1.7e-51 205.7 102 100.0
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 4.4e-23 111.3 86 68.6
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 7.5e-23 110.5 71 78.9
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 2.2e-22 109.0 86 67.4
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 4.9e-22 107.8 86 66.3
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 4.9e-22 107.8 86 67.4
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 6.3e-22 107.5 86 66.3
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 6.3e-22 107.5 86 66.3
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 1.1e-21 106.7 71 76.1
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 2.4e-21 105.5 86 65.1
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 4.1e-21 104.8 86 65.1
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 5.4e-21 104.4 86 64.0
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 5.4e-21 104.4 71 73.2
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 1.2e-20 103.2 86 62.8
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 2.7e-20 102.1 86 62.8
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 2.7e-20 102.1 73 72.6
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 2.5e-18 95.5 58 75.9
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 1.8e-16 89.4 74 63.5
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 4.0e-16 88.2 92 52.2
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 5.2e-16 87.8 75 62.7
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 8.9e-16 87.0 62 69.4
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 1.2e-15 86.7 60 73.3
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 1.2e-15 86.7 62 67.7
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 1.5e-15 86.3 92 54.3
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 1.5e-15 86.3 98 52.0
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 2.0e-15 85.9 97 50.5
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 3.4e-15 85.1 87 54.0
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 3.4e-15 85.1 92 52.2
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 3.4e-15 85.1 80 58.8
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 4.4e-15 84.7 92 51.1
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 5.8e-15 84.3 62 62.9
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 7.5e-15 84.0 63 68.3
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 7.5e-15 84.0 63 68.3
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 7.5e-15 84.0 63 68.3
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 7.5e-15 84.0 63 68.3
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 1.3e-14 83.2 92 51.1
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.3e-14 83.2 81 56.8
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.3e-14 83.2 72 61.1
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.3e-14 83.2 72 61.1
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 1.3e-14 83.2 93 50.5
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 1.3e-14 83.2 74 60.8
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 1.7e-14 82.8 95 50.5
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 1.7e-14 82.8 62 64.5
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 1.7e-14 82.8 62 67.7
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 1.7e-14 82.8 59 69.5
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 1.7e-14 82.8 70 61.4
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 2.2e-14 82.4 61 70.5
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 2.2e-14 82.4 71 60.6
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 2.2e-14 82.4 75 61.3
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 2.9e-14 82.0 72 63.9
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 3.7e-14 81.6 63 63.5
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 3.7e-14 81.6 62 64.5
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 3.7e-14 81.6 49 77.6
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 4.9e-14 81.3 97 49.5
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 6.4e-14 80.9 63 66.7
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 6.4e-14 80.9 62 64.5
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 8.3e-14 80.5 79 57.0
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 8.3e-14 80.5 72 59.7
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.1e-13 80.1 58 70.7
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 1.1e-13 80.1 49 75.5
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 1.8e-13 79.3 57 71.9
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.8e-13 79.3 63 65.1
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 2.4e-13 79.0 93 51.6
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 2.4e-13 79.0 49 77.6
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 3.2e-13 78.6 90 48.9
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 3.2e-13 78.6 49 75.5
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 3.2e-13 78.6 90 50.0
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 3.2e-13 78.6 93 48.4
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 4.1e-13 78.2 71 56.3
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 4.1e-13 78.2 72 59.7
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 4.1e-13 78.2 62 62.9
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 4.1e-13 78.2 62 62.9
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 4.1e-13 78.2 93 50.5
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 5.4e-13 77.8 93 51.6
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 5.4e-13 77.8 63 65.1
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 5.4e-13 77.8 73 57.5
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 5.4e-13 77.8 80 53.8
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 7.0e-13 77.4 80 57.5
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 7.0e-13 77.4 49 73.5
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 7.0e-13 77.4 93 48.4
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 9.2e-13 77.0 53 69.8
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 9.2e-13 77.0 49 73.5
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 9.2e-13 77.0 62 61.3
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.2e-12 76.6 80 53.8
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 1.2e-12 76.6 90 47.8
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.2e-12 76.6 75 58.7
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 1.6e-12 76.3 62 59.7
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 1.6e-12 76.3 49 73.5
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 1.6e-12 76.3 49 73.5
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.0e-12 75.9 79 58.2
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 2.0e-12 75.9 62 59.7
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 2.0e-12 75.9 93 48.4
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 2.0e-12 75.9 49 73.5
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 2.7e-12 75.5 93 46.2
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 3.5e-12 75.1 49 73.5
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 3.5e-12 75.1 49 73.5
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 3.5e-12 75.1 49 73.5
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 4.6e-12 74.7 74 56.8
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 1.3e-11 73.2 48 68.8
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 1.7e-11 72.8 67 55.2
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 1.7e-11 72.8 55 67.3
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 3.0e-11 72.0 80 51.2
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 5.0e-11 71.2 78 50.0
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 8.6e-11 70.5 43 79.1
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 8.6e-11 70.5 74 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.5e-10 69.7 71 53.5
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 1.5e-10 69.7 73 50.7
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 1.9e-10 69.3 55 58.2
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 3.3e-10 68.6 73 49.3
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 3.3e-10 68.6 80 45.0
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 1.6e-09 66.2 73 47.9
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 5.2e-08 61.2 67 52.2
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 7.5e-07 57.4 93 39.8
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 2.2e-06 55.8 65 47.7
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 6.4e-06 54.3 43 62.8
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 6.4e-06 54.3 53 56.6


User provided reference genes

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