Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 8.7e-185 650.2 339 100.0
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 1.2e-162 576.6 339 90.6
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 2.2e-159 565.8 339 89.4
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 1.0e-156 557.0 339 88.5
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 1.3e-156 556.6 339 88.2
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 1.3e-148 530.0 342 85.4
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 1.5e-144 516.5 339 82.9
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 7.7e-141 504.2 340 81.2
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 1.7e-135 486.5 339 77.9
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 1.8e-134 483.0 339 77.3
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 7.8e-133 477.6 339 77.3
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 8.6e-132 474.2 339 77.0
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 1.6e-130 469.9 339 76.7
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 1.2e-117 427.2 339 70.2
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 1.2e-106 390.6 248 79.8
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 3.6e-106 389.0 274 73.7
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 4.7e-106 388.7 248 79.0
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 4.7e-106 388.7 232 82.8
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 1.1e-105 387.5 267 75.3
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 1.1e-105 387.5 267 75.3
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 1.8e-105 386.7 248 78.2
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 1.8e-105 386.7 252 77.8
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 2.6e-104 382.9 257 75.1
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 2.6e-104 382.9 241 79.7
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 7.6e-104 381.3 248 76.2
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 1.3e-103 380.6 251 76.9
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 1.3e-103 380.6 273 72.2
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 1.3e-103 380.6 261 74.3
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 2.9e-103 379.4 268 70.9
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 3.8e-103 379.0 246 78.5
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 3.8e-103 379.0 252 76.6
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 4.9e-103 378.6 261 75.1
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 1.1e-102 377.5 266 73.7
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 1.9e-102 376.7 244 77.5
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 1.9e-102 376.7 253 75.5
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 7.1e-102 374.8 246 76.8
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 1.6e-101 373.6 245 75.5
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 4.6e-101 372.1 245 76.3
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 1.0e-100 370.9 244 76.6
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 1.0e-100 370.9 271 72.0
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 1.3e-100 370.5 277 70.0
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 3.9e-100 369.0 255 74.1
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 5.1e-100 368.6 259 74.9
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 8.7e-100 367.9 243 77.4
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 8.7e-100 367.9 230 79.1
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 1.1e-99 367.5 280 66.8
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 2.5e-99 366.3 230 79.1
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 3.3e-99 365.9 239 77.0
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 5.6e-99 365.2 248 75.0
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 5.6e-99 365.2 223 82.1
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 5.6e-99 365.2 249 74.3
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 5.6e-99 365.2 230 78.3
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 7.3e-99 364.8 239 78.2
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 2.1e-98 363.2 263 71.1
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 2.8e-98 362.8 240 75.4
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 2.8e-98 362.8 258 74.4
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 1.4e-97 360.5 262 71.0
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.4e-97 360.5 242 75.2
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 2.4e-97 359.8 265 71.3
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 5.3e-97 358.6 303 63.4
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 6.9e-97 358.2 253 71.9
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 1.2e-96 357.5 237 75.9
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 1.2e-96 357.5 286 64.0
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 3.4e-96 355.9 258 71.3
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 3.4e-96 355.9 245 73.1
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 4.4e-96 355.5 258 71.3
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 5.8e-96 355.1 233 75.1
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 9.9e-96 354.4 252 72.2
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 2.9e-95 352.8 261 71.6
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 3.8e-95 352.4 270 68.1
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 1.1e-94 350.9 245 72.2
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 2.4e-94 349.7 232 74.6
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 7.1e-94 348.2 305 62.3
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 1.3e-92 344.0 285 64.9
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.7e-92 343.6 246 69.5
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 2.3e-92 343.2 243 70.0
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 6.6e-92 341.7 250 70.8
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 1.1e-91 340.9 260 68.1
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 3.3e-91 339.3 308 60.7
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 9.6e-91 337.8 249 68.7
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 1.3e-90 337.4 207 80.2
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 1.6e-90 337.0 251 68.9
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 1.2e-88 330.9 338 58.9
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 3.4e-88 329.3 241 70.1
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 4.5e-88 328.9 253 68.0
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 7.6e-88 328.2 207 77.8
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 1.3e-87 327.4 216 75.5
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.1e-86 324.3 250 69.2
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 5.4e-86 322.0 230 72.2
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 3.5e-85 319.3 243 70.0
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 6.0e-85 318.5 262 64.5
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 3.3e-83 312.8 251 65.7
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.1e-82 310.1 255 64.7
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 8.1e-82 308.1 284 59.5
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 2.4e-81 306.6 226 66.8
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 3.1e-81 306.2 348 51.7
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 1.2e-80 304.3 216 71.8
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 2.9e-79 299.7 248 66.9
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 4.2e-78 295.8 265 61.9
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 2.1e-77 293.5 193 75.1
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 5.6e-75 285.4 257 63.4
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 6.9e-73 278.5 196 71.4
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 9.0e-73 278.1 238 62.6
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 1.5e-72 277.3 194 71.6
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 1.1e-70 271.2 253 59.7
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 1.0e-68 264.6 172 74.4
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 1.8e-68 263.8 223 60.5
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 1.3e-66 257.7 207 66.7
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 2.2e-66 256.9 239 59.4
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 9.0e-65 251.5 181 69.6
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 1.4e-54 217.6 176 63.1
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 5.7e-51 205.7 206 54.4
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 1.3e-50 204.5 171 63.2
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 9.1e-41 171.8 162 57.4
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 8.5e-39 165.2 161 57.1
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 8.5e-39 165.2 105 78.1
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.0e-36 158.3 168 54.8
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 3.3e-35 153.3 160 55.6
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 1.8e-25 120.9 235 39.6
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 6.6e-23 112.5 144 47.2
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 1.1e-22 111.7 258 35.7
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 1.9e-22 110.9 150 45.3
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 5.5e-22 109.4 65 78.5
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 8.9e-20 102.1 146 46.6
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 1.7e-18 97.8 117 52.1
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 1.2e-16 91.7 227 29.5
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 1.2e-16 91.7 246 29.3
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 2.3e-15 87.4 62 67.7
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 5.0e-15 86.3 56 69.6
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 1.5e-11 74.7 49 71.4
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 1.4e-09 68.2 87 52.9
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 2.3e-07 60.8 61 54.1


User provided reference genes

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