Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17045 Brassica carinata HOM05D009799 ORTHO05D009939 4.2e-56 221.1 108 100.0
C02p49600 Brassica napus HOM05D009799 ORTHO05D009939 4.2e-56 221.1 108 100.0
BolC2t11039H Brassica oleracea HOM05D009799 ORTHO05D009939 1.0e-54 216.5 108 98.1
A02p32070 Brassica napus HOM05D009799 ORTHO05D009939 6.7e-54 213.8 109 98.2
BraA02t08219Z Brassica rapa HOM05D009799 ORTHO05D009939 6.7e-54 213.8 109 98.2
BraA09t37943Z Brassica rapa HOM05D009799 ORTHO05D009939 1.3e-33 146.4 108 71.3
BcaC04g21579 Brassica carinata HOM05D009799 ORTHO05D009939 2.9e-33 145.2 108 70.4
C09p30170 Brassica napus HOM05D009799 ORTHO05D009939 2.9e-33 145.2 108 70.4
BolC9t55883H Brassica oleracea HOM05D009799 ORTHO05D009939 2.9e-33 145.2 108 70.4
BcaC06g34159 Brassica carinata HOM05D009799 ORTHO05D009939 3.8e-33 144.8 108 70.4
C07p32070 Brassica napus HOM05D009799 ORTHO05D009939 3.8e-33 144.8 108 71.3
A06p44390 Brassica napus HOM05D009799 ORTHO05D009939 6.5e-33 144.1 108 70.4
BcaB07g30740 Brassica carinata HOM05D009799 ORTHO05D009939 3.2e-32 141.7 108 70.4
Sp2g12960 Schrenkiella parvula HOM05D009799 ORTHO05D009939 4.2e-32 141.4 86 81.4
BcaC06g31297 Brassica carinata HOM05D009799 ORTHO05D009939 1.2e-31 139.8 97 73.2
BolC7t43746H Brassica oleracea HOM05D009799 ORTHO05D009939 4.6e-31 137.9 108 67.6
BraA06t27313Z Brassica rapa HOM05D009799 ORTHO05D009939 2.3e-30 135.6 108 66.7
CARHR144060 Cardamine hirsuta HOM05D009799 ORTHO05D009939 2.4e-27 125.6 87 75.9
A09p23430 Brassica napus HOM05D009799 ORTHO05D009939 2.1e-23 112.5 78 73.1
AL5G10500 Arabidopsis lyrata HOM05D009799 ORTHO05D009939 3.6e-23 111.7 108 59.3
BcaB07g30393 Brassica carinata HOM05D009799 ORTHO05D009939 1.4e-22 109.8 111 59.5
AT2G01505 Arabidopsis thaliana HOM05D009799 ORTHO05D009939 3.9e-22 108.2 104 56.7
Carub.0005s0047 Capsella rubella HOM05D009799 ORTHO05D009939 1.1e-21 106.7 86 68.6
Aa31LG2G8410 Aethionema arabicum HOM05D009799 ORTHO05D009939 3.3e-21 105.1 126 54.8
Thecc.02G283700 Theobroma cacao HOM05D009151 ORTHO05D009939 2.7e-07 58.9 96 40.6
Hma1.2p1_0096F.1_g047660 Hydrangea macrophylla HOM05D009151 ORTHO05D009939 3.6e-07 58.5 88 44.3
Ciclev10017256m.g Citrus clementina HOM05D009151 ORTHO05D009939 6.1e-07 57.8 98 41.8
Cc11_g08430 Coffea canephora HOM05D014752 ORTHO05D009939 1.8e-06 56.2 101 40.6
Atru.chr11.466 Acer truncatum HOM05D009151 ORTHO05D009939 2.3e-06 55.8 87 42.5


User provided reference genes

Program Settings